Cow genome map

Conread name: rspc010_b16.y1

Conread position: 5-176
Cow position: chr27:26467631-26467801 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 166, 32

Conread position: 13-169
Cow position: chr27:16275758-16275912 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 20

Conread position: 13-176
Cow position: chr27:22614780-22614615 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 30

Conread position: 17-187
Cow position: chr27:22181986-22181809 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 28

Conread position: 31-163
Cow position: chr27:28254141-28254010 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 32-164
Cow position: chr27:21951076-21951207 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 61

Conread position: 32-164
Cow position: chr27:29160081-29160211 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 32-176
Cow position: chr27:26112013-26112158 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 5, 55

Conread position: 33-175
Cow position: chr27:29877574-29877715 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 11

Conread position: 33-181
Cow position: chr27:16965476-16965330 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 10

Conread position: 33-184
Cow position: chr27:27020198-27020343 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 138, 10

Conread position: 33-185
Cow position: chr27:25000061-25000216 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 12

Conread position: 33-195
Cow position: chr27:19074123-19074280 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 33-203
Cow position: chr27:6924984-6924815 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 138, 10

Conread position: 35-189
Cow position: chr27:10979761-10979607 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 57

Conread position: 35-206
Cow position: chr27:15865505-15865342 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 136, 57

Conread position: 36-149
Cow position: chr27:20514720-20514608 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 36-150
Cow position: chr27:5553367-5553256 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 36-150
Cow position: chr27:26317963-26317850 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 36-153
Cow position: chr27:26173398-26173282 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 36-154
Cow position: chr27:17908362-17908478 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 36-155
Cow position: chr27:15925243-15925124 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 36-159
Cow position: chr27:26154218-26154096 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 36-160
Cow position: chr27:23060216-23060339 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 36-163
Cow position: chr27:26980065-26980191 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position: chr27:23177415-23177539 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 36-164
Cow position: chr27:23232813-23232685 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 51

Conread position: 36-164
Cow position: chr27:23554429-23554556 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position: chr27:26625106-26624980 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 36-164
Cow position: chr27:26909694-26909815 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position: chr27:28015835-28015962 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 36-164
Cow position: chr27:30996931-30997056 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 36-169
Cow position: chr27:2592439-2592305 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 80, 57

Conread position: 36-169
Cow position: chr27:16705148-16705021 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 36-169
Cow position: chr27:26481296-26481429 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 51

Conread position: 36-169
Cow position: chr27:31498680-31498551 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 36-170
Cow position: chr27:26509257-26509389 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 36-176
Cow position: chr27:9504453-9504313 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 50

Conread position: 36-176
Cow position: chr27:10404217-10404357 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 50

Conread position: 36-176
Cow position: chr27:21054357-21054217 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 50

Conread position: 36-178
Cow position: chr27:30914907-30914765 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 56

Conread position: 36-181
Cow position: chr27:15867287-15867148 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 56

Conread position: 36-181
Cow position: chr27:20048531-20048392 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 135, 51

Conread position: 36-181
Cow position: chr27:26118397-26118253 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 36-181
Cow position: chr27:27012596-27012451 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 134, 56

Conread position: 36-184
Cow position: chr27:11561673-11561527 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 135, 57

Conread position: 36-184
Cow position: chr27:20266328-20266474 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 135, 50

Conread position: 36-184
Cow position: chr27:24303844-24303695 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 51

Conread position: 36-184
Cow position: chr27:26437224-26437368 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 56

Conread position: 36-185
Cow position: chr27:4486880-4487029 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 135, 40

Conread position: 36-185
Cow position: chr27:26885612-26885758 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 36-186
Cow position: chr27:8062453-8062601 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 135, 36

Conread position: 36-187
Cow position: chr27:4413922-4414066 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 36-187
Cow position: chr27:26121657-26121506 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 56

Conread position: 36-187
Cow position: chr27:30441602-30441450 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 57

Conread position: 36-195
Cow position: chr27:28931904-28932058 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 37-158
Cow position: chr27:24709453-24709333 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 37-159
Cow position: chr27:24331617-24331492 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 50

Conread position: 37-185
Cow position: chr27:28921996-28922144 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 136, 49

Conread position: 37-211
Cow position: chr27:27058507-27058679 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 41-221
Cow position: chr27:7935265-7935440 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 156, 54

Conread position: 42-164
Cow position: chr27:18507541-18507418 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 57

Conread position: 42-164
Cow position: chr27:26245652-26245773 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 42-164
Cow position: chr27:31373078-31373199 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 42-176
Cow position: chr27:26984052-26983923 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 56

Conread position: 42-176
Cow position: chr27:31157703-31157570 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 34

Conread position: 42-178
Cow position: chr27:13875625-13875491 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 129, 13

Conread position: 42-181
Cow position: chr27:11208663-11208802 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 129, 50

Conread position: 42-181
Cow position: chr27:26314232-26314371 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 124, 34

Conread position: 42-184
Cow position: chr27:1353474-1353333 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 42-186
Cow position: chr27:19500342-19500485 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 44

Conread position: 42-195
Cow position: chr27:22583638-22583487 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 42-204
Cow position: chr27:11982754-11982917 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 44

Conread position: 43-160
Cow position: chr27:13318084-13318200 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 44-155
Cow position: chr27:19779766-19779658 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 44-164
Cow position: chr27:26188719-26188600 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 44-169
Cow position: chr27:21978250-21978375 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 28

Conread position: 45-164
Cow position: chr27:18791623-18791741 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 45-199
Cow position: chr27:6752069-6751918 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 46-159
Cow position: chr27:26236218-26236106 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 46-160
Cow position: chr27:24731148-24731261 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 48-184
Cow position: chr27:23128354-23128217 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 48-189
Cow position: chr27:19653686-19653830 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 44

Conread position: 49-187
Cow position: chr27:28896765-28896627 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 43

Conread position: 49-189
Cow position: chr27:29458216-29458077 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 38

Conread position: 58-187
Cow position: chr27:28472815-28472944 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 113, 34

Conread position: 65-186
Cow position: chr27:30868880-30869001 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 106, 21

Conread position: 76-229
Cow position: chr27:31479135-31478981 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 100

Show alignments to all cow chromosomes.