Cow genome map

Conread name: rspc010_b16.y1

Conread position: 5-184
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 8

Conread position: 9-169
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 14

Conread position: 16-226
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 163

Conread position: 29-195
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 15

Conread position: 30-176
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 63

Conread position: 31-181
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 62

Conread position: 32-164
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 56

Conread position: 32-179
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 119

Conread position: 33-176
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 11

Conread position: 33-176
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 53

Conread position: 33-184
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 10

Conread position: 33-184
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 137, 10

Conread position: 33-185
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 138, 36

Conread position: 36-150
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 36-153
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 36-154
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 36-160
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 36-163
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 36-163
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 36-163
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 36-164
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 36-164
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 36-164
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 36-164
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position:
Alignm length: 129
Alignm identity: 108
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 36-164
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 36-165
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 36-165
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 36-168
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 36-169
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 36-170
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 36-175
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 135, 56

Conread position: 36-176
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 135, 31

Conread position: 36-176
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 136, 50

Conread position: 36-176
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 135, 0

Conread position: 36-176
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 135, 56

Conread position: 36-176
Cow position:
Alignm length: 142
Alignm identity: 118
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 135, 50

Conread position: 36-176
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 36-176
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 36-178
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 50

Conread position: 36-178
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 135, 0

Conread position: 36-181
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 135, 51

Conread position: 36-181
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 56

Conread position: 36-181
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 36-181
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 36-181
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 36-181
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 37

Conread position: 36-181
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 57

Conread position: 36-181
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 98

Conread position: 36-182
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 36-184
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 36-184
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 56

Conread position: 36-184
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 128, 50

Conread position: 36-184
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 50

Conread position: 36-184
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 135, 56

Conread position: 36-184
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 57

Conread position: 36-184
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 135, 56

Conread position: 36-185
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 51

Conread position: 36-185
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 36-185
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 135, 60

Conread position: 36-185
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 105

Conread position: 36-186
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 135, 62

Conread position: 36-186
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 135, 35

Conread position: 36-187
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 56

Conread position: 36-187
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 135, 56

Conread position: 36-187
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 57

Conread position: 36-187
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 36-189
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 56

Conread position: 36-189
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 51

Conread position: 36-190
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 135, 50

Conread position: 36-192
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 135, 0

Conread position: 36-195
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 56

Conread position: 36-195
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 57

Conread position: 36-197
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 40

Conread position: 36-205
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 141, 56

Conread position: 37-164
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 37-164
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 37-184
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 42-155
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 42-160
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 42-160
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 42-164
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 42-164
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 42-170
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 42-172
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 128, 44

Conread position: 42-176
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 44

Conread position: 42-176
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 111, 50

Conread position: 42-176
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 42-177
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 130, 50

Conread position: 42-184
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 50

Conread position: 42-185
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 50

Conread position: 42-186
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 44

Conread position: 42-186
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 82, 45

Conread position: 42-186
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 44

Conread position: 42-195
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 42-205
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 42-295
Cow position:
Alignm length: 257
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 45

Conread position: 43-164
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 43-178
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 33

Conread position: 43-187
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 53

Conread position: 43-187
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 128, 49

Conread position: 43-197
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 49

Conread position: 44-176
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 127, 42

Conread position: 44-181
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 43

Conread position: 45-164
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 45-181
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 31

Conread position: 46-169
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 46-176
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 40

Conread position: 46-176
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 26

Conread position: 46-181
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 52

Conread position: 46-184
Cow position:
Alignm length: 140
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 46

Conread position: 47-176
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 47-181
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 124, 45

Conread position: 47-181
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 124, 46

Conread position: 48-164
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 52-176
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 119, 40

Conread position: 54-184
Cow position:
Alignm length: 132
Alignm identity: 108
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 117, 38

Conread position: 60-169
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 60-181
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 32

Conread position: 61-177
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 19

Conread position: 64-181
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 27

Conread position: 166-285
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 19

Show alignments to all cow chromosomes.