Cow genome map
| Conread name: | rspc010_b16.y1 | 
| Conread position: | 6-194 | 
| Cow position: | chr6:45094640-45094832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 17-185 | 
| Cow position: | chr6:30688433-30688266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 10, 76 | 
| Conread position: | 18-195 | 
| Cow position: | chr6:53932767-53932590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 19, 63 | 
| Conread position: | 24-185 | 
| Cow position: | chr6:29496078-29496237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 13, 69 | 
| Conread position: | 28-176 | 
| Cow position: | chr6:41014888-41014738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 80, 64 | 
| Conread position: | 29-189 | 
| Cow position: | chr6:49825002-49824843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 142, 51 | 
| Conread position: | 29-215 | 
| Cow position: | chr6:58697540-58697351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 142, 63 | 
| Conread position: | 30-169 | 
| Cow position: | chr6:28559629-28559768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 7, 65 | 
| Conread position: | 31-176 | 
| Cow position: | chr6:34251206-34251062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 140, 55 | 
| Conread position: | 32-169 | 
| Cow position: | chr6:46173165-46173030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 5, 55 | 
| Conread position: | 32-195 | 
| Cow position: | chr6:15587501-15587337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 5, 53 | 
| Conread position: | 33-169 | 
| Cow position: | chr6:42567589-42567724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 33-176 | 
| Cow position: | chr6:24903481-24903339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 138, 8 | 
| Conread position: | 33-185 | 
| Cow position: | chr6:44544052-44543901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 138, 10 | 
| Conread position: | 33-186 | 
| Cow position: | chr6:16137674-16137521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 47, 10 | 
| Conread position: | 35-186 | 
| Cow position: | chr6:15242934-15243083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 136, 57 | 
| Conread position: | 36-146 | 
| Cow position: | chr6:31865191-31865300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 36-147 | 
| Cow position: | chr6:69153508-69153618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 36-148 | 
| Cow position: | chr6:7801298-7801188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 36-148 | 
| Cow position: | chr6:12964951-12965064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 36-164 | 
| Cow position: | chr6:32336130-32336262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 36-164 | 
| Cow position: | chr6:48379515-48379388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 36-164 | 
| Cow position: | chr6:48792876-48793003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 36-164 | 
| Cow position: | chr6:61681176-61681301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 36-169 | 
| Cow position: | chr6:8369520-8369652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 36-169 | 
| Cow position: | chr6:19563385-19563251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 36-169 | 
| Cow position: | chr6:27219266-27219394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 36-169 | 
| Cow position: | chr6:56986552-56986420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 36-169 | 
| Cow position: | chr6:57079522-57079654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 36-169 | 
| Cow position: | chr6:63251824-63251693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 36-170 | 
| Cow position: | chr6:14914137-14914005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 36-170 | 
| Cow position: | chr6:26054806-26054671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 36-170 | 
| Cow position: | chr6:62669964-62670100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 36-176 | 
| Cow position: | chr6:3952617-3952757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 135, 50 | 
| Conread position: | 36-176 | 
| Cow position: | chr6:5330511-5330650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 135, 35 | 
| Conread position: | 36-176 | 
| Cow position: | chr6:21004775-21004916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 36-176 | 
| Cow position: | chr6:35985038-35984898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-176 | 
| Cow position: | chr6:42483513-42483651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 135, 40 | 
| Conread position: | 36-176 | 
| Cow position: | chr6:47245878-47246018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 31, 58 | 
| Conread position: | 36-176 | 
| Cow position: | chr6:62437513-62437653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-177 | 
| Cow position: | chr6:41375868-41376006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 36-177 | 
| Cow position: | chr6:57089302-57089441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 135, 55 | 
| Conread position: | 36-177 | 
| Cow position: | chr6:66302507-66302371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 97, 66 | 
| Conread position: | 36-178 | 
| Cow position: | chr6:16411709-16411851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 135, 50 | 
| Conread position: | 36-179 | 
| Cow position: | chr6:50771264-50771122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-181 | 
| Cow position: | chr6:15937756-15937611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 137, 57 | 
| Conread position: | 36-181 | 
| Cow position: | chr6:18447419-18447274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-181 | 
| Cow position: | chr6:21475826-21475966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 135, 40 | 
| Conread position: | 36-181 | 
| Cow position: | chr6:26408406-26408261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-181 | 
| Cow position: | chr6:43906585-43906440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 135, 59 | 
| Conread position: | 36-181 | 
| Cow position: | chr6:48435929-48436071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 135, 40 | 
| Conread position: | 36-181 | 
| Cow position: | chr6:51530089-51529949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 135, 51 | 
| Conread position: | 36-181 | 
| Cow position: | chr6:54840409-54840259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 76, 51 | 
| Conread position: | 36-183 | 
| Cow position: | chr6:10039822-10039968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-184 | 
| Cow position: | chr6:4468867-4469010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 134, 30 | 
| Conread position: | 36-184 | 
| Cow position: | chr6:10163764-10163918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 63, 47 | 
| Conread position: | 36-184 | 
| Cow position: | chr6:16380643-16380792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 119, 56 | 
| Conread position: | 36-184 | 
| Cow position: | chr6:61631510-61631365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 18, 41 | 
| Conread position: | 36-184 | 
| Cow position: | chr6:62224520-62224665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 36-185 | 
| Cow position: | chr6:12669194-12669343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 36-185 | 
| Cow position: | chr6:55196311-55196461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 36-185 | 
| Cow position: | chr6:62805741-62805890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-186 | 
| Cow position: | chr6:19045721-19045873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 74, 57 | 
| Conread position: | 36-187 | 
| Cow position: | chr6:64432037-64432180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 138, 56 | 
| Conread position: | 36-189 | 
| Cow position: | chr6:24536433-24536277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 36-189 | 
| Cow position: | chr6:62724654-62724807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-195 | 
| Cow position: | chr6:10176203-10176044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-195 | 
| Cow position: | chr6:18440379-18440224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 36-195 | 
| Cow position: | chr6:31928735-31928894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 134, 56 | 
| Conread position: | 36-195 | 
| Cow position: | chr6:55548435-55548279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 36-206 | 
| Cow position: | chr6:57467695-57467863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 135, 56 | 
| Conread position: | 37-176 | 
| Cow position: | chr6:8187090-8186951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 134, 49 | 
| Conread position: | 37-176 | 
| Cow position: | chr6:15058476-15058610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 37-184 | 
| Cow position: | chr6:29851468-29851612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 133, 52 | 
| Conread position: | 37-195 | 
| Cow position: | chr6:23381569-23381411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 134, 55 | 
| Conread position: | 42-150 | 
| Cow position: | chr6:50984327-50984434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 58, 37 | 
| Conread position: | 42-159 | 
| Cow position: | chr6:61644754-61644638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 42-164 | 
| Cow position: | chr6:57143592-57143471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 42-169 | 
| Cow position: | chr6:61884070-61883945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 42-173 | 
| Cow position: | chr6:2585047-2585173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 42-173 | 
| Cow position: | chr6:41733737-41733867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 42-174 | 
| Cow position: | chr6:30895887-30895758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 42-175 | 
| Cow position: | chr6:21052345-21052211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 129, 0 | 
| Conread position: | 42-176 | 
| Cow position: | chr6:12099582-12099454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 131, 51 | 
| Conread position: | 42-176 | 
| Cow position: | chr6:19936465-19936332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 129, 29 | 
| Conread position: | 42-176 | 
| Cow position: | chr6:45159953-45159819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 129, 44 | 
| Conread position: | 42-176 | 
| Cow position: | chr6:67574492-67574626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 129, 50 | 
| Conread position: | 42-178 | 
| Cow position: | chr6:16016138-16016273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 129, 34 | 
| Conread position: | 42-178 | 
| Cow position: | chr6:28088943-28088809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 129, 34 | 
| Conread position: | 42-181 | 
| Cow position: | chr6:28562064-28561929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 42-186 | 
| Cow position: | chr6:21467163-21467026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 42-189 | 
| Cow position: | chr6:24110386-24110533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 129, 50 | 
| Conread position: | 42-195 | 
| Cow position: | chr6:22876826-22876673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 129, 50 | 
| Conread position: | 42-195 | 
| Cow position: | chr6:33302499-33302650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 129, 60 | 
| Conread position: | 42-206 | 
| Cow position: | chr6:17172930-17173094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 133, 50 | 
| Conread position: | 42-210 | 
| Cow position: | chr6:66947717-66947550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 127, 50 | 
| Conread position: | 42-214 | 
| Cow position: | chr6:36225213-36225380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 129, 69 | 
| Conread position: | 42-225 | 
| Cow position: | chr6:47355927-47356112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 55, 41 | 
| Conread position: | 42-231 | 
| Cow position: | chr6:65264441-65264259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 129, 54 | 
| Conread position: | 42-235 | 
| Cow position: | chr6:49685922-49686116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 129, 50 | 
| Conread position: | 43-176 | 
| Cow position: | chr6:54820937-54821070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 128, 49 | 
| Conread position: | 43-181 | 
| Cow position: | chr6:11246873-11247009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 130, 33 | 
| Conread position: | 43-192 | 
| Cow position: | chr6:50682196-50682049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 44-154 | 
| Cow position: | chr6:17404665-17404779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 61, 48 | 
| Conread position: | 44-169 | 
| Cow position: | chr6:13742092-13742215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 44-176 | 
| Cow position: | chr6:17313840-17313974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 44-181 | 
| Cow position: | chr6:66434058-66434195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 126, 48 | 
| Conread position: | 44-182 | 
| Cow position: | chr6:4760098-4760235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 70, 43 | 
| Conread position: | 44-185 | 
| Cow position: | chr6:54828216-54828075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 127, 48 | 
| Conread position: | 44-189 | 
| Cow position: | chr6:51648931-51649076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 127, 51 | 
| Conread position: | 45-160 | 
| Cow position: | chr6:19695914-19696028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 46-164 | 
| Cow position: | chr6:5985743-5985619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 47-184 | 
| Cow position: | chr6:53138830-53138694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 124, 45 | 
| Conread position: | 48-184 | 
| Cow position: | chr6:21184114-21183979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 123, 44 | 
| Conread position: | 48-186 | 
| Cow position: | chr6:14263780-14263646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 55-176 | 
| Cow position: | chr6:65831478-65831599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 118, 38 | 
| Conread position: | 58-181 | 
| Cow position: | chr6:456831-456709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 113, 35 | 
| Conread position: | 58-181 | 
| Cow position: | chr6:16700372-16700495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 113, 34 | 
| Conread position: | 61-186 | 
| Cow position: | chr6:19681840-19681963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 110, 14 | 
| Conread position: | 64-185 | 
| Cow position: | chr6:16738739-16738860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 107, 22 | 
| Conread position: | 68-164 | 
| Cow position: | chr6:11894876-11894781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 97 | 
| Alignm identity: | 82 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 24, 0 | 
Show alignments to all cow chromosomes.
