Cow genome map


           Conread name:
           rspc010_k18.y1
        

               Conread position:
               1-485
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 203
               

               Conread position:
               1-578
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 51
               

               Conread position:
               1-587
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               356
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               196, 203
               

               Conread position:
               2-556
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 170
               

               Conread position:
               2-560
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               483, 413
               

               Conread position:
               2-574
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               176, 170
               

               Conread position:
               3-474
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 72
               

               Conread position:
               3-497
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-556
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 287
               

               Conread position:
               3-559
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-560
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 201
               

               Conread position:
               3-576
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               492, 478
               

               Conread position:
               3-576
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 249
               

               Conread position:
               3-576
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 250
               

               Conread position:
               3-578
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-578
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               3-594
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 250
               

               Conread position:
               4-567
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 77
               

               Conread position:
               5-550
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               192, 16
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               331
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               8-560
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 232
               

               Conread position:
               9-511
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-547
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               307
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               534, 529
               

               Conread position:
               10-560
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               325
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               171, 166
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               349
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               189, 193
               

               Conread position:
               11-577
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 193
               

               Conread position:
               12-386
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               12-388
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               12-451
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               55, 68
               

               Conread position:
               12-451
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               12-464
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               12-482
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               151, 158
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-495
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               286
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               169, 164
               

               Conread position:
               12-553
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               325
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               192, 188
               

               Conread position:
               12-555
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               334
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               236, 226
               

               Conread position:
               12-558
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               138, 158
               

               Conread position:
               12-559
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               345
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               86, 79
               

               Conread position:
               12-559
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               504, 495
               

               Conread position:
               12-576
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               348
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               54, 73
               

               Conread position:
               12-577
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               12-577
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               420, 415
               

               Conread position:
               12-579
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-579
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               340
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               12-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               352
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               24, 20
               

               Conread position:
               12-580
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 154
               

               Conread position:
               12-580
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               339
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               185, 193
               

               Conread position:
               12-580
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               342
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               138, 154
               

               Conread position:
               12-580
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               337
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               108, 103
               

               Conread position:
               12-586
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 69
               

               Conread position:
               12-587
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               12-595
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               21-578
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               345
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               53, 59
               

               Conread position:
               22-534
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               313
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               52, 61
               

               Conread position:
               22-578
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               337
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               160, 153
               

               Conread position:
               22-578
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               331
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               326, 312
               

               Conread position:
               29-578
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               328
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 82
               

               Conread position:
               29-579
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               30-554
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               35-322
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               230, 217
               

               Conread position:
               35-480
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               169, 161
               

               Conread position:
               35-484
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               169, 165
               

               Conread position:
               35-534
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               315
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               35-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               35-554
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               323
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               44, 33
               

               Conread position:
               35-559
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               35-559
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               398, 392
               

               Conread position:
               35-559
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               35-560
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-594
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               335
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               115, 103
               

               Conread position:
               36-496
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               121, 135
               

               Conread position:
               36-556
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 122
               

               Conread position:
               36-580
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               326
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 67
               

               Conread position:
               36-595
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               342
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               168, 164
               

               Conread position:
               39-580
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               321
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               304, 280
               

               Conread position:
               42-547
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               391, 387
               

               Conread position:
               57-490
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               208, 198
               

               Conread position:
               86-507
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               179, 169
               

               Conread position:
               87-587
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 163
               

               Conread position:
               95-579
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-586
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 109
               

               Conread position:
               96-593
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               104-599
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               296
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               93, 108
               

               Conread position:
               105-587
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               112-451
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 92
               

               Conread position:
               140-586
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               105, 94
               

               Conread position:
               165-494
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 90
               

               Conread position:
               198-508
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               50, 6
               

               Conread position:
               256-579
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 108
               

               Conread position:
               339-578
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.