Cow genome map
| Conread name: | rspc010_k18.y1 |
| Conread position: | 1-389 |
| Cow position: | chr17:22498921-22498533 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 116 |
| Conread position: | 1-483 |
| Cow position: | chr17:22452159-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 180 |
| Conread position: | 2-553 |
| Cow position: | chr17:22552461-22551910 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 174 |
| Conread position: | 3-531 |
| Cow position: | chr17:22589710-22589182 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 194, 202 |
| Conread position: | 3-553 |
| Cow position: | chr17:22552040-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 202 |
| Conread position: | 3-556 |
| Cow position: | chr17:22452325-22451772 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 196 |
| Conread position: | 3-587 |
| Cow position: | chr17:22552628-22552044 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 366 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 4-398 |
| Cow position: | chr17:22451987-22451594 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 196, 8 |
| Conread position: | 7-552 |
| Cow position: | chr17:22499083-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 311 |
| Conread position: | 7-586 |
| Cow position: | chr17:22499419-22498840 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-587 |
| Cow position: | chr17:22552204-22551624 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 76 |
| Conread position: | 8-590 |
| Cow position: | chr17:22552708-22552125 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 45 |
| Conread position: | 10-560 |
| Cow position: | chr17:22553041-22552491 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 10-564 |
| Cow position: | chr17:22499164-22498610 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 190 |
| Conread position: | 10-578 |
| Cow position: | chr17:22499248-22498680 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-554 |
| Cow position: | chr17:22452401-22451858 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 189 |
| Conread position: | 11-559 |
| Cow position: | chr17:22552536-22551988 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 170 |
| Conread position: | 11-560 |
| Cow position: | chr17:22589954-22589405 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 334 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 186, 194 |
| Conread position: | 11-565 |
| Cow position: | chr17:22552368-22551814 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 12-473 |
| Cow position: | chr17:22498994-22498533 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 188 |
| Conread position: | 12-553 |
| Cow position: | chr17:22552871-22552330 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 334 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 169, 164 |
| Conread position: | 12-559 |
| Cow position: | chr17:22552283-22551736 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 63 |
| Conread position: | 12-589 |
| Cow position: | chr17:22590121-22589544 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 351 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 14-553 |
| Cow position: | chr17:22590201-22589664 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 326 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 110, 8 |
| Conread position: | 29-560 |
| Cow position: | chr17:22473416-22473948 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 29-595 |
| Cow position: | chr17:22473169-22473730 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 34-555 |
| Cow position: | chr17:22590015-22589494 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 324 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 170, 166 |
| Conread position: | 35-403 |
| Cow position: | chr17:22452041-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 35-481 |
| Cow position: | chr17:22452209-22451763 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 220, 229 |
| Conread position: | 35-546 |
| Cow position: | chr17:22552932-22552422 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 162, 170 |
| Conread position: | 35-560 |
| Cow position: | chr17:22552092-22551567 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 170 |
| Conread position: | 35-560 |
| Cow position: | chr17:22552764-22552239 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 141 |
| Conread position: | 35-580 |
| Cow position: | chr17:22473338-22473883 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 35-597 |
| Cow position: | chr17:22589846-22589284 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 335 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 49, 63 |
| Conread position: | 36-492 |
| Cow position: | chr17:22589761-22589305 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 47 |
| Conread position: | 36-553 |
| Cow position: | chr17:22590265-22589748 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 323 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 116, 111 |
| Conread position: | 43-578 |
| Cow position: | chr17:22473262-22473797 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 191 |
| Conread position: | 83-553 |
| Cow position: | chr17:22452413-22451943 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 122 |
| Conread position: | 96-577 |
| Cow position: | chr17:22590289-22589808 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 97-560 |
| Cow position: | chr17:22553122-22552659 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 294 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 110, 100 |
| Conread position: | 119-594 |
| Cow position: | chr17:22499391-22498916 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 81 |
| Conread position: | 165-578 |
| Cow position: | chr17:22590304-22589891 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 170-577 |
| Cow position: | chr17:22499424-22499017 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-559 |
| Cow position: | chr17:22452401-22452021 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 203-590 |
| Cow position: | chr17:22553100-22552713 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 262-580 |
| Cow position: | chr17:22452402-22452084 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 33, 26 |
Show alignments to all cow chromosomes.