• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rspc010_k18.y1
        

               
Conread position:
               
1-323
               

               
Cow position:
               
chr18:51765271-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr18:56494151-56494506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
203, 199
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr18:42792531-42792891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
196, 203
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr18:41198386-41198752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:44184327-44183954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr18:52011968-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
215, 199
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr18:42959824-42959402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr18:49032487-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr18:43022428-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr18:44240400-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr18:49032403-49031957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
143, 168
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:54993379-54993870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr18:51368211-51367687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 199
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr18:40075162-40075690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr18:52428444-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
492, 496
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr18:52433625-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
492, 496
               

               
Conread position:
               
1-555
               

               
Cow position:
               
chr18:51752196-51751642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
1-556
               

               
Cow position:
               
chr18:43093615-43093060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
1-558
               

               
Cow position:
               
chr18:44154144-44153605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 162
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr18:44253584-44253040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 207
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr18:49021541-49022097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
199, 31
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr18:52447079-52447637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 280
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr18:41197630-41198189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 203
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr18:42791271-42791830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
1-577
               

               
Cow position:
               
chr18:44239980-44240556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 321
               

               
Conread position:
               
1-578
               

               
Cow position:
               
chr18:42744410-42743833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 204
               

               
Conread position:
               
1-578
               

               
Cow position:
               
chr18:42837713-42837136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-580
               

               
Cow position:
               
chr18:41197882-41198461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
1-580
               

               
Cow position:
               
chr18:52447751-52448331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:42744578-42743992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-588
               

               
Cow position:
               
chr18:44398300-44397713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 199
               

               
Conread position:
               
1-590
               

               
Cow position:
               
chr18:41197798-41198387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:43022680-43022087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 159
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:43022932-43022339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 159
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:52428192-52428785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 157
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:52433373-52433966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 169
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:52447163-52447756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
543, 538
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:52447415-52448008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 156
               

               
Conread position:
               
1-596
               

               
Cow position:
               
chr18:42675350-42674755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 96
               

               
Conread position:
               
1-597
               

               
Cow position:
               
chr18:40324577-40323981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 248
               

               
Conread position:
               
1-604
               

               
Cow position:
               
chr18:44253416-44252834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr18:43168268-43168543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
195, 202
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr18:43093026-43092752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:43119763-43119441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 265
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr18:56316273-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
408, 397
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr18:56128093-56128582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:55523448-55523939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
2-494
               

               
Cow position:
               
chr18:52447920-52448413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 155
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr18:54979952-54980503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr18:52428277-52428830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr18:52433458-52434011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
2-556
               

               
Cow position:
               
chr18:40086374-40085830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 73
               

               
Conread position:
               
2-559
               

               
Cow position:
               
chr18:52447332-52447889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
2-560
               

               
Cow position:
               
chr18:54993128-54993686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
2-577
               

               
Cow position:
               
chr18:42985588-42985013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
2-581
               

               
Cow position:
               
chr18:52428361-52428940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-581
               

               
Cow position:
               
chr18:52433542-52434121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-588
               

               
Cow position:
               
chr18:49032906-49032320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
515, 511
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr18:44184914-44184323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 409
               

               
Conread position:
               
2-594
               

               
Cow position:
               
chr18:52428025-52428617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
2-594
               

               
Cow position:
               
chr18:52447584-52448176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 198
               

               
Conread position:
               
2-594
               

               
Cow position:
               
chr18:52447668-52448260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 198
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr18:40075416-40075699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
193, 201
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr18:43048587-43048231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 163
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr18:42837459-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 202
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr18:42674760-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr18:55066717-55066347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr18:43174795-43174430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 0
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr18:42827545-42827953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
194, 201
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:44253092-44252698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:51812323-51811919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 146
               

               
Conread position:
               
3-450
               

               
Cow position:
               
chr18:41948703-41948258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 202
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:42837543-42837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 71
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:44397962-44397514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 197
               

               
Conread position:
               
3-463
               

               
Cow position:
               
chr18:14453963-14453503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
194, 202
               

               
Conread position:
               
3-484
               

               
Cow position:
               
chr18:51367706-51367225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 194
               

               
Conread position:
               
3-485
               

               
Cow position:
               
chr18:50295245-50295727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
201, 197
               

               
Conread position:
               
3-490
               

               
Cow position:
               
chr18:53636071-53635584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-490
               

               
Cow position:
               
chr18:55523617-55524104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
121, 114
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr18:40324407-40323919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 114
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr18:40324743-40324254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr18:51969566-51970044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
201, 43
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr18:53509463-53509952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
162, 170
               

               
Conread position:
               
3-529
               

               
Cow position:
               
chr18:43168017-43168543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 201
               

               
Conread position:
               
3-531
               

               
Cow position:
               
chr18:42674928-42674400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 197
               

               
Conread position:
               
3-532
               

               
Cow position:
               
chr18:50048998-50048469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
94, 80
               

               
Conread position:
               
3-534
               

               
Cow position:
               
chr18:41948871-41948340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 202
               

               
Conread position:
               
3-534
               

               
Cow position:
               
chr18:42837627-42837096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-534
               

               
Cow position:
               
chr18:42984999-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 315
               

               
Conread position:
               
3-534
               

               
Cow position:
               
chr18:44240318-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 201
               

               
Conread position:
               
3-534
               

               
Cow position:
               
chr18:55066885-55066354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 114
               

               
Conread position:
               
3-537
               

               
Cow position:
               
chr18:55067053-55066519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
3-539
               

               
Cow position:
               
chr18:49032569-49032034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 385
               

               
Conread position:
               
3-542
               

               
Cow position:
               
chr18:42744324-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 197
               

               
Conread position:
               
3-546
               

               
Cow position:
               
chr18:49022619-49023161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
3-551
               

               
Cow position:
               
chr18:51874120-51874660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
196, 41
               

               
Conread position:
               
3-552
               

               
Cow position:
               
chr18:54968013-54968561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
3-553
               

               
Cow position:
               
chr18:44184577-44184027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
3-553
               

               
Cow position:
               
chr18:50022433-50021877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
3-553
               

               
Cow position:
               
chr18:53559815-53560365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
3-553
               

               
Cow position:
               
chr18:53586522-53585972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 114
               

               
Conread position:
               
3-556
               

               
Cow position:
               
chr18:51969482-51970024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
201, 132
               

               
Conread position:
               
3-557
               

               
Cow position:
               
chr18:43120014-43119460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 168
               

               
Conread position:
               
3-559
               

               
Cow position:
               
chr18:42675096-42674540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 202
               

               
Conread position:
               
3-559
               

               
Cow position:
               
chr18:51400589-51401145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 241
               

               
Conread position:
               
3-559
               

               
Cow position:
               
chr18:53610494-53609938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
240, 234
               

               
Conread position:
               
3-559
               

               
Cow position:
               
chr18:55066969-55066413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
3-559
               

               
Cow position:
               
chr18:56248102-56247536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 197
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr18:42960242-42959694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 0
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr18:43093853-43093308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr18:43120098-43119541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr18:44253914-44253362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr18:53498026-53498586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr18:54967428-54967982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr18:54992961-54993518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr18:55018273-55018832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr18:43175047-43174488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 502
               

               
Conread position:
               
3-565
               

               
Cow position:
               
chr18:42985251-42984689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 249
               

               
Conread position:
               
3-565
               

               
Cow position:
               
chr18:44398382-44397820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 197
               

               
Conread position:
               
3-574
               

               
Cow position:
               
chr18:52012468-52011899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 22
               

               
Conread position:
               
3-575
               

               
Cow position:
               
chr18:51789752-51789180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
3-575
               

               
Cow position:
               
chr18:53525749-53526320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
201, 197
               

               
Conread position:
               
3-575
               

               
Cow position:
               
chr18:54980121-54980691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
3-576
               

               
Cow position:
               
chr18:42744492-42743919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 202
               

               
Conread position:
               
3-576
               

               
Cow position:
               
chr18:52012386-52011813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
343, 333
               

               
Conread position:
               
3-577
               

               
Cow position:
               
chr18:40324659-40324085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 114
               

               
Conread position:
               
3-577
               

               
Cow position:
               
chr18:42675012-42674438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 505
               

               
Conread position:
               
3-577
               

               
Cow position:
               
chr18:43022762-43022188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-577
               

               
Cow position:
               
chr18:44240066-44240640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-577
               

               
Cow position:
               
chr18:53525833-53526407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
3-577
               

               
Cow position:
               
chr18:53559731-53560305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
3-578
               

               
Cow position:
               
chr18:43167933-43168508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-578
               

               
Cow position:
               
chr18:51789836-51789261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 167
               

               
Conread position:
               
3-579
               

               
Cow position:
               
chr18:41948955-41948379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-579
               

               
Cow position:
               
chr18:42959990-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 237
               

               
Conread position:
               
3-579
               

               
Cow position:
               
chr18:44239814-44240390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-579
               

               
Cow position:
               
chr18:51789332-51788756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 163
               

               
Conread position:
               
3-579
               

               
Cow position:
               
chr18:51812575-51811999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 163
               

               
Conread position:
               
3-580
               

               
Cow position:
               
chr18:40086207-40085637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 157
               

               
Conread position:
               
3-580
               

               
Cow position:
               
chr18:40306226-40306803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
196, 201
               

               
Conread position:
               
3-580
               

               
Cow position:
               
chr18:53586942-53586365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
3-581
               

               
Cow position:
               
chr18:43175383-43174805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 399
               

               
Conread position:
               
3-581
               

               
Cow position:
               
chr18:44154311-44153739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
3-581
               

               
Cow position:
               
chr18:44398214-44397636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
541, 536
               

               
Conread position:
               
3-584
               

               
Cow position:
               
chr18:44398130-44397549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 197
               

               
Conread position:
               
3-587
               

               
Cow position:
               
chr18:43120266-43119682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-587
               

               
Cow position:
               
chr18:43175131-43174547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
541, 536
               

               
Conread position:
               
3-587
               

               
Cow position:
               
chr18:43175467-43174883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-587
               

               
Cow position:
               
chr18:51765689-51765105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
170, 157
               

               
Conread position:
               
3-587
               

               
Cow position:
               
chr18:51789416-51788832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 166
               

               
Conread position:
               
3-587
               

               
Cow position:
               
chr18:52446997-52447581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 287
               

               
Conread position:
               
3-588
               

               
Cow position:
               
chr18:56330046-56329461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
194, 202
               

               
Conread position:
               
3-589
               

               
Cow position:
               
chr18:40086541-40085962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
3-591
               

               
Cow position:
               
chr18:53509295-53509882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
201, 197
               

               
Conread position:
               
3-593
               

               
Cow position:
               
chr18:51789500-51788910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
3-593
               

               
Cow position:
               
chr18:51812659-51812069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 173
               

               
Conread position:
               
3-593
               

               
Cow position:
               
chr18:56247672-56247092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 180
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:41949207-41948616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 202
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:41949291-41948700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:42985167-42984576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 165
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:43175215-43174624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 334
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:43175551-43174960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:43175707-43175128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:44239898-44240489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
561, 565
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:44240150-44240741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 164
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:51368042-51367451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 232
               

               
Conread position:
               
3-596
               

               
Cow position:
               
chr18:42675180-42674587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 197
               

               
Conread position:
               
3-596
               

               
Cow position:
               
chr18:42675432-42674839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
3-596
               

               
Cow position:
               
chr18:50848812-50849405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
3-597
               

               
Cow position:
               
chr18:41949039-41948445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-599
               

               
Cow position:
               
chr18:51874036-51874625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr18:43048670-43048251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 349
               

               
Conread position:
               
4-492
               

               
Cow position:
               
chr18:55008451-55008937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
4-503
               

               
Cow position:
               
chr18:41948786-41948289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 201
               

               
Conread position:
               
4-530
               

               
Cow position:
               
chr18:44398045-44397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 196
               

               
Conread position:
               
4-556
               

               
Cow position:
               
chr18:49032652-49032100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 196
               

               
Conread position:
               
4-559
               

               
Cow position:
               
chr18:42837794-42837239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-576
               

               
Cow position:
               
chr18:50848140-50848713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
4-576
               

               
Cow position:
               
chr18:52427859-52428431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
4-577
               

               
Cow position:
               
chr18:43023096-43022524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 8
               

               
Conread position:
               
4-589
               

               
Cow position:
               
chr18:40086878-40086291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 103
               

               
Conread position:
               
4-593
               

               
Cow position:
               
chr18:40306563-40307152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 93
               

               
Conread position:
               
4-594
               

               
Cow position:
               
chr18:52433208-52433798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr18:14453143-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
201, 193
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr18:14453707-14453322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
198, 191
               

               
Conread position:
               
7-448
               

               
Cow position:
               
chr18:49022875-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
137, 158
               

               
Conread position:
               
7-490
               

               
Cow position:
               
chr18:50271522-50272005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
7-530
               

               
Cow position:
               
chr18:43093273-43092752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
7-553
               

               
Cow position:
               
chr18:42790941-42791487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
7-556
               

               
Cow position:
               
chr18:50271606-50272154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
190, 198
               

               
Conread position:
               
7-559
               

               
Cow position:
               
chr18:51812991-51812439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
7-560
               

               
Cow position:
               
chr18:50099036-50099589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
190, 198
               

               
Conread position:
               
7-575
               

               
Cow position:
               
chr18:55018193-55018761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
7-576
               

               
Cow position:
               
chr18:52427778-52428347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 162
               

               
Conread position:
               
7-576
               

               
Cow position:
               
chr18:52427946-52428515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 154
               

               
Conread position:
               
7-580
               

               
Cow position:
               
chr18:56329538-56328965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
7-588
               

               
Cow position:
               
chr18:40306734-40307315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
7-594
               

               
Cow position:
               
chr18:42985331-42984744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
7-594
               

               
Cow position:
               
chr18:52433127-52433714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 162
               

               
Conread position:
               
8-131
               

               
Cow position:
               
chr18:43053313-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr18:56329201-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
339, 328
               

               
Conread position:
               
8-448
               

               
Cow position:
               
chr18:14453310-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
8-448
               

               
Cow position:
               
chr18:40306903-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 157
               

               
Conread position:
               
8-492
               

               
Cow position:
               
chr18:33092960-33092476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 192
               

               
Conread position:
               
8-492
               

               
Cow position:
               
chr18:56434032-56434507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
164, 65
               

               
Conread position:
               
8-545
               

               
Cow position:
               
chr18:40324486-40323950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 44
               

               
Conread position:
               
8-556
               

               
Cow position:
               
chr18:51752021-51751477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
196, 192
               

               
Conread position:
               
8-559
               

               
Cow position:
               
chr18:33064372-33063821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 232
               

               
Conread position:
               
8-560
               

               
Cow position:
               
chr18:40306315-40306867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
200, 191
               

               
Conread position:
               
8-565
               

               
Cow position:
               
chr18:49032816-49032259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 192
               

               
Conread position:
               
8-565
               

               
Cow position:
               
chr18:49033320-49032763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
200, 192
               

               
Conread position:
               
8-576
               

               
Cow position:
               
chr18:52432960-52433528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 301
               

               
Conread position:
               
8-577
               

               
Cow position:
               
chr18:33064540-33063971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 233
               

               
Conread position:
               
8-577
               

               
Cow position:
               
chr18:40075001-40075570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
8-579
               

               
Cow position:
               
chr18:42694071-42693499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 150
               

               
Conread position:
               
8-580
               

               
Cow position:
               
chr18:42744655-42744083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 397
               

               
Conread position:
               
8-580
               

               
Cow position:
               
chr18:42837874-42837302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 409
               

               
Conread position:
               
8-588
               

               
Cow position:
               
chr18:56329621-56329041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
8-593
               

               
Cow position:
               
chr18:44253993-44253412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
8-594
               

               
Cow position:
               
chr18:52427611-52428197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 301
               

               
Conread position:
               
9-465
               

               
Cow position:
               
chr18:44184403-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
9-484
               

               
Cow position:
               
chr18:52012044-52011569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
9-493
               

               
Cow position:
               
chr18:51789158-51788674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
188, 196
               

               
Conread position:
               
9-518
               

               
Cow position:
               
chr18:51812401-51811894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
188, 196
               

               
Conread position:
               
9-547
               

               
Cow position:
               
chr18:33064119-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 82
               

               
Conread position:
               
9-556
               

               
Cow position:
               
chr18:33064203-33063656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 166
               

               
Conread position:
               
9-559
               

               
Cow position:
               
chr18:33064287-33063737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 237
               

               
Conread position:
               
9-560
               

               
Cow position:
               
chr18:33064455-33063904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 151
               

               
Conread position:
               
9-562
               

               
Cow position:
               
chr18:51368624-51368070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 192
               

               
Conread position:
               
9-581
               

               
Cow position:
               
chr18:52012212-52011640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
287, 281
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr18:41198479-41198792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
10-451
               

               
Cow position:
               
chr18:56329283-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
398, 413
               

               
Conread position:
               
10-484
               

               
Cow position:
               
chr18:56494076-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
194, 190
               

               
Conread position:
               
10-491
               

               
Cow position:
               
chr18:54967183-54967664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
10-492
               

               
Cow position:
               
chr18:53559990-53560472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
10-544
               

               
Cow position:
               
chr18:1418066-1418601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 190
               

               
Conread position:
               
10-556
               

               
Cow position:
               
chr18:51367866-51367321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 62
               

               
Conread position:
               
10-556
               

               
Cow position:
               
chr18:56329703-56329157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
187, 195
               

               
Conread position:
               
10-559
               

               
Cow position:
               
chr18:44154219-44153677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 236
               

               
Conread position:
               
10-560
               

               
Cow position:
               
chr18:1417814-1418364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
100, 110
               

               
Conread position:
               
10-560
               

               
Cow position:
               
chr18:40075087-40075637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
10-560
               

               
Cow position:
               
chr18:43093522-43092972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 195
               

               
Conread position:
               
10-560
               

               
Cow position:
               
chr18:50083430-50083980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
10-560
               

               
Cow position:
               
chr18:50099543-50100093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 106
               

               
Conread position:
               
10-575
               

               
Cow position:
               
chr18:55018028-55018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
10-577
               

               
Cow position:
               
chr18:53586599-53586032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
10-578
               

               
Cow position:
               
chr18:54979708-54980275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
10-580
               

               
Cow position:
               
chr18:42675590-42675023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
10-580
               

               
Cow position:
               
chr18:55008707-55009277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
10-586
               

               
Cow position:
               
chr18:53560242-53560814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
10-587
               

               
Cow position:
               
chr18:51367950-51367374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 155
               

               
Conread position:
               
10-594
               

               
Cow position:
               
chr18:43120175-43119591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 308
               

               
Conread position:
               
11-215
               

               
Cow position:
               
chr18:43053394-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-322
               

               
Cow position:
               
chr18:51839160-51838849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-323
               

               
Cow position:
               
chr18:51367530-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-324
               

               
Cow position:
               
chr18:56128942-56129253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
11-327
               

               
Cow position:
               
chr18:44253000-44252694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
11-372
               

               
Cow position:
               
chr18:43022334-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 162
               

               
Conread position:
               
11-404
               

               
Cow position:
               
chr18:53610066-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 96
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr18:33092705-33092315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
137, 151
               

               
Conread position:
               
11-448
               

               
Cow position:
               
chr18:50295421-50295858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
11-459
               

               
Cow position:
               
chr18:41198312-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 193
               

               
Conread position:
               
11-479
               

               
Cow position:
               
chr18:43119922-43119454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
466, 460
               

               
Conread position:
               
11-485
               

               
Cow position:
               
chr18:50099292-50099766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
11-491
               

               
Cow position:
               
chr18:55018113-55018593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
11-492
               

               
Cow position:
               
chr18:53560159-53560640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
11-492
               

               
Cow position:
               
chr18:55008792-55009273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-511
               

               
Cow position:
               
chr18:51874205-51874705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
188, 193
               

               
Conread position:
               
11-522
               

               
Cow position:
               
chr18:42959898-42959397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 146
               

               
Conread position:
               
11-532
               

               
Cow position:
               
chr18:42791029-42791550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 164
               

               
Conread position:
               
11-534
               

               
Cow position:
               
chr18:44184485-44183962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
11-542
               

               
Cow position:
               
chr18:41198228-41198758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 193
               

               
Conread position:
               
11-545
               

               
Cow position:
               
chr18:53635391-53634860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
193, 189
               

               
Conread position:
               
11-546
               

               
Cow position:
               
chr18:50099628-50100162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
11-547
               

               
Cow position:
               
chr18:50848400-50848936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
11-551
               

               
Cow position:
               
chr18:50848904-50849444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
11-552
               

               
Cow position:
               
chr18:56247580-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
11-553
               

               
Cow position:
               
chr18:42791617-42792159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
11-553
               

               
Cow position:
               
chr18:50848736-50849278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
11-554
               

               
Cow position:
               
chr18:43093353-43092811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
11-554
               

               
Cow position:
               
chr18:50848568-50849111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
11-555
               

               
Cow position:
               
chr18:33093041-33092497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 163
               

               
Conread position:
               
11-559
               

               
Cow position:
               
chr18:33064621-33064073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 146
               

               
Conread position:
               
11-559
               

               
Cow position:
               
chr18:44184821-44184273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-559
               

               
Cow position:
               
chr18:44253335-44252798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
472, 225
               

               
Conread position:
               
11-560
               

               
Cow position:
               
chr18:41197556-41198105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
11-560
               

               
Cow position:
               
chr18:41197724-41198273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 220
               

               
Conread position:
               
11-560
               

               
Cow position:
               
chr18:42791113-42791662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
11-560
               

               
Cow position:
               
chr18:42791701-42792250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
11-560
               

               
Cow position:
               
chr18:50021999-50021447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
145, 159
               

               
Conread position:
               
11-560
               

               
Cow position:
               
chr18:50059138-50058589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
186, 193
               

               
Conread position:
               
11-560
               

               
Cow position:
               
chr18:51368453-51367904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 103
               

               
Conread position:
               
11-575
               

               
Cow position:
               
chr18:54967016-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
11-575
               

               
Cow position:
               
chr18:54979541-54980104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
11-578
               

               
Cow position:
               
chr18:42985411-42984844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
11-578
               

               
Cow position:
               
chr18:44184737-44184170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-580
               

               
Cow position:
               
chr18:43175291-43174722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 410
               

               
Conread position:
               
11-580
               

               
Cow position:
               
chr18:51766017-51765448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 193
               

               
Conread position:
               
11-580
               

               
Cow position:
               
chr18:51969088-51969637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
186, 158
               

               
Conread position:
               
11-580
               

               
Cow position:
               
chr18:54992801-54993370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
11-587
               

               
Cow position:
               
chr18:42792037-42792613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 193
               

               
Conread position:
               
11-587
               

               
Cow position:
               
chr18:44184653-44184077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
532, 528
               

               
Conread position:
               
11-588
               

               
Cow position:
               
chr18:43120501-43119933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 57
               

               
Conread position:
               
11-594
               

               
Cow position:
               
chr18:42960150-42959576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 279
               

               
Conread position:
               
11-594
               

               
Cow position:
               
chr18:42985075-42984492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 157
               

               
Conread position:
               
11-594
               

               
Cow position:
               
chr18:43022586-43022003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-594
               

               
Cow position:
               
chr18:43022838-43022255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-594
               

               
Cow position:
               
chr18:44240242-44240825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-594
               

               
Cow position:
               
chr18:52427698-52428281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 242
               

               
Conread position:
               
11-594
               

               
Cow position:
               
chr18:52433047-52433630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 242
               

               
Conread position:
               
11-595
               

               
Cow position:
               
chr18:51812819-51812235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 189
               

               
Conread position:
               
11-596
               

               
Cow position:
               
chr18:42792205-42792790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 253
               

               
Conread position:
               
11-606
               

               
Cow position:
               
chr18:53560075-53560667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr18:43168362-43168564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
12-369
               

               
Cow position:
               
chr18:42984822-42984465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
12-389
               

               
Cow position:
               
chr18:50058717-50058344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
12-406
               

               
Cow position:
               
chr18:51839243-51838849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
192, 188
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:50849073-50849468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 117
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:51367613-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
108, 101
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:51765344-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
192, 188
               

               
Conread position:
               
12-477
               

               
Cow position:
               
chr18:14453222-14452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
12-484
               

               
Cow position:
               
chr18:50848653-50849125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 325
               

               
Conread position:
               
12-485
               

               
Cow position:
               
chr18:50083516-50083989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
200, 188
               

               
Conread position:
               
12-491
               

               
Cow position:
               
chr18:56434195-56434674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
12-532
               

               
Cow position:
               
chr18:51752269-51751749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 192
               

               
Conread position:
               
12-534
               

               
Cow position:
               
chr18:43022501-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-542
               

               
Cow position:
               
chr18:42792374-42792903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
187, 192
               

               
Conread position:
               
12-547
               

               
Cow position:
               
chr18:42791786-42792321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
12-553
               

               
Cow position:
               
chr18:42791870-42792411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 192
               

               
Conread position:
               
12-553
               

               
Cow position:
               
chr18:49032980-49032439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-554
               

               
Cow position:
               
chr18:1417984-1418526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
12-554
               

               
Cow position:
               
chr18:42791366-42791908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 76
               

               
Conread position:
               
12-554
               

               
Cow position:
               
chr18:42792290-42792832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 192
               

               
Conread position:
               
12-555
               

               
Cow position:
               
chr18:42791198-42791741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
12-556
               

               
Cow position:
               
chr18:42675255-42674711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 193
               

               
Conread position:
               
12-556
               

               
Cow position:
               
chr18:43093928-43093396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
12-556
               

               
Cow position:
               
chr18:55017862-55018406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
12-557
               

               
Cow position:
               
chr18:49032728-49032183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
12-559
               

               
Cow position:
               
chr18:33064704-33064157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
12-559
               

               
Cow position:
               
chr18:51812482-51811935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
12-560
               

               
Cow position:
               
chr18:33064872-33064324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
160, 148
               

               
Conread position:
               
12-560
               

               
Cow position:
               
chr18:54993474-54994019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
12-574
               

               
Cow position:
               
chr18:56128439-56129001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
12-575
               

               
Cow position:
               
chr18:51752101-51751537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
12-575
               

               
Cow position:
               
chr18:56434111-56434673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 105
               

               
Conread position:
               
12-576
               

               
Cow position:
               
chr18:40086703-40086138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
12-577
               

               
Cow position:
               
chr18:53587017-53586452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 72
               

               
Conread position:
               
12-578
               

               
Cow position:
               
chr18:54993054-54993619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
12-579
               

               
Cow position:
               
chr18:41949114-41948547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-579
               

               
Cow position:
               
chr18:55017778-55018345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
12-580
               

               
Cow position:
               
chr18:51765848-51765280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
12-581
               

               
Cow position:
               
chr18:51789575-51789006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 158
               

               
Conread position:
               
12-583
               

               
Cow position:
               
chr18:53559908-53560479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
111, 105
               

               
Conread position:
               
12-587
               

               
Cow position:
               
chr18:52447258-52447833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 109
               

               
Conread position:
               
12-589
               

               
Cow position:
               
chr18:51812734-51812157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 188
               

               
Conread position:
               
12-590
               

               
Cow position:
               
chr18:43093436-43092858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 188
               

               
Conread position:
               
12-596
               

               
Cow position:
               
chr18:40306403-40306986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
13-556
               

               
Cow position:
               
chr18:41198064-41198605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
13-576
               

               
Cow position:
               
chr18:52427532-52428095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
530, 523
               

               
Conread position:
               
13-587
               

               
Cow position:
               
chr18:50048736-50048168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
13-597
               

               
Cow position:
               
chr18:52432881-52433465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
530, 523
               

               
Conread position:
               
14-560
               

               
Cow position:
               
chr18:42960315-42959769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 304
               

               
Conread position:
               
14-576
               

               
Cow position:
               
chr18:44154470-44153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 483
               

               
Conread position:
               
16-587
               

               
Cow position:
               
chr18:44398453-44397882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
17-577
               

               
Cow position:
               
chr18:53498124-53498687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
17-594
               

               
Cow position:
               
chr18:52446927-52447504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
438, 432
               

               
Conread position:
               
19-548
               

               
Cow position:
               
chr18:53498300-53498826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
105, 98
               

               
Conread position:
               
22-535
               

               
Cow position:
               
chr18:54967111-54967624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
22-547
               

               
Cow position:
               
chr18:56316209-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
287, 281
               

               
Conread position:
               
22-559
               

               
Cow position:
               
chr18:53635716-53635179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
128, 145
               

               
Conread position:
               
22-560
               

               
Cow position:
               
chr18:52012115-52011577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 230
               

               
Conread position:
               
22-560
               

               
Cow position:
               
chr18:55008635-55009173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
22-590
               

               
Cow position:
               
chr18:51839485-51838917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
23-560
               

               
Cow position:
               
chr18:43120414-43119877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
23-588
               

               
Cow position:
               
chr18:49033389-49032824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
174, 182
               

               
Conread position:
               
24-395
               

               
Cow position:
               
chr18:44153635-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
24-551
               

               
Cow position:
               
chr18:51789227-51788701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
24-579
               

               
Cow position:
               
chr18:43022993-43022438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
520, 515
               

               
Conread position:
               
24-579
               

               
Cow position:
               
chr18:51765752-51765197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 176
               

               
Conread position:
               
24-580
               

               
Cow position:
               
chr18:51765920-51765364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
24-589
               

               
Cow position:
               
chr18:51969335-51969889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 180
               

               
Conread position:
               
24-594
               

               
Cow position:
               
chr18:43120329-43119759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 297
               

               
Conread position:
               
28-590
               

               
Cow position:
               
chr18:43094161-43093614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
29-480
               

               
Cow position:
               
chr18:43048729-43048281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 0
               

               
Conread position:
               
29-556
               

               
Cow position:
               
chr18:43093671-43093144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 118
               

               
Conread position:
               
29-580
               

               
Cow position:
               
chr18:41949349-41948798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 176
               

               
Conread position:
               
29-587
               

               
Cow position:
               
chr18:44154368-44153817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 139
               

               
Conread position:
               
29-594
               

               
Cow position:
               
chr18:14454021-14453456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 171
               

               
Conread position:
               
29-597
               

               
Cow position:
               
chr18:40086937-40086367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 163
               

               
Conread position:
               
30-554
               

               
Cow position:
               
chr18:43167876-43168400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
30-580
               

               
Cow position:
               
chr18:50049139-50048589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
30-587
               

               
Cow position:
               
chr18:50848335-50848892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 146
               

               
Conread position:
               
32-592
               

               
Cow position:
               
chr18:33093104-33092544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 223
               

               
Conread position:
               
33-485
               

               
Cow position:
               
chr18:50245745-50246196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
33-496
               

               
Cow position:
               
chr18:54967289-54967749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
33-575
               

               
Cow position:
               
chr18:54967790-54968330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
33-575
               

               
Cow position:
               
chr18:54992906-54993448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 16
               

               
Conread position:
               
33-576
               

               
Cow position:
               
chr18:56433890-56434423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
35-299
               

               
Cow position:
               
chr18:43053454-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
35-410
               

               
Cow position:
               
chr18:50083875-50084249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
139, 145
               

               
Conread position:
               
35-451
               

               
Cow position:
               
chr18:50099904-50100320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 134
               

               
Conread position:
               
35-478
               

               
Cow position:
               
chr18:50030977-50030532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
35-483
               

               
Cow position:
               
chr18:53610126-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
35-485
               

               
Cow position:
               
chr18:50099736-50100186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
145, 115
               

               
Conread position:
               
35-491
               

               
Cow position:
               
chr18:56128798-56129253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr18:42693707-42693250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
313, 302
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr18:50098980-50099437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
124, 110
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr18:50849012-50849469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
35-529
               

               
Cow position:
               
chr18:50246334-50246828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
35-542
               

               
Cow position:
               
chr18:42827409-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 131
               

               
Conread position:
               
35-553
               

               
Cow position:
               
chr18:50271466-50271984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
111, 136
               

               
Conread position:
               
35-554
               

               
Cow position:
               
chr18:49022735-49023254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
35-556
               

               
Cow position:
               
chr18:51400705-51401226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 164
               

               
Conread position:
               
35-556
               

               
Cow position:
               
chr18:56247724-56247211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 119
               

               
Conread position:
               
35-559
               

               
Cow position:
               
chr18:50049222-50048694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 169
               

               
Conread position:
               
35-559
               

               
Cow position:
               
chr18:51368261-51367738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 133
               

               
Conread position:
               
35-559
               

               
Cow position:
               
chr18:51368345-51367821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 165
               

               
Conread position:
               
35-559
               

               
Cow position:
               
chr18:52012270-52011746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
230, 217
               

               
Conread position:
               
35-560
               

               
Cow position:
               
chr18:41198168-41198693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 369
               

               
Conread position:
               
35-560
               

               
Cow position:
               
chr18:43167797-43168322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 278
               

               
Conread position:
               
35-560
               

               
Cow position:
               
chr18:50059198-50058673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
35-560
               

               
Cow position:
               
chr18:50246166-50246691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
35-563
               

               
Cow position:
               
chr18:50059282-50058754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
373, 387
               

               
Conread position:
               
35-565
               

               
Cow position:
               
chr18:49033041-49032511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
35-574
               

               
Cow position:
               
chr18:53610378-53609839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 138
               

               
Conread position:
               
35-575
               

               
Cow position:
               
chr18:50048882-50048343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
162, 168
               

               
Conread position:
               
35-575
               

               
Cow position:
               
chr18:53635451-53634913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
35-577
               

               
Cow position:
               
chr18:44239762-44240304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 287
               

               
Conread position:
               
35-578
               

               
Cow position:
               
chr18:33064933-33064390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 214
               

               
Conread position:
               
35-578
               

               
Cow position:
               
chr18:42744712-42744169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 170
               

               
Conread position:
               
35-578
               

               
Cow position:
               
chr18:42837931-42837388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-578
               

               
Cow position:
               
chr18:50059534-50058991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
162, 169
               

               
Conread position:
               
35-578
               

               
Cow position:
               
chr18:53635871-53635328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 49
               

               
Conread position:
               
35-579
               

               
Cow position:
               
chr18:53635619-53635075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
35-579
               

               
Cow position:
               
chr18:56128546-56129090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
35-580
               

               
Cow position:
               
chr18:49022317-49022860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
169, 161
               

               
Conread position:
               
35-580
               

               
Cow position:
               
chr18:51367758-51367213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
35-580
               

               
Cow position:
               
chr18:56329762-56329217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
509, 501
               

               
Conread position:
               
35-586
               

               
Cow position:
               
chr18:51839388-51838837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
35-589
               

               
Cow position:
               
chr18:51812879-51812325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:40324879-40324320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 165
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:49033209-49032650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:50059030-50058473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:56329426-56328867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
211, 219
               

               
Conread position:
               
35-596
               

               
Cow position:
               
chr18:40324795-40324234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 165
               

               
Conread position:
               
35-604
               

               
Cow position:
               
chr18:44153781-44153226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
36-532
               

               
Cow position:
               
chr18:49022820-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
107, 100
               

               
Conread position:
               
36-532
               

               
Cow position:
               
chr18:50295362-50295858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
144, 114
               

               
Conread position:
               
36-548
               

               
Cow position:
               
chr18:42791978-42792490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 135
               

               
Conread position:
               
36-549
               

               
Cow position:
               
chr18:42791474-42791987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
36-559
               

               
Cow position:
               
chr18:42960536-42960022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
36-559
               

               
Cow position:
               
chr18:50083708-50084231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
168, 164
               

               
Conread position:
               
36-560
               

               
Cow position:
               
chr18:54979650-54980174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
141, 132
               

               
Conread position:
               
36-580
               

               
Cow position:
               
chr18:50083288-50083832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
161, 168
               

               
Conread position:
               
37-560
               

               
Cow position:
               
chr18:40306175-40306699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
5, 471
               

               
Conread position:
               
37-581
               

               
Cow position:
               
chr18:56247808-56247270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
38-302
               

               
Cow position:
               
chr18:51873708-51873972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 137
               

               
Conread position:
               
38-555
               

               
Cow position:
               
chr18:33065014-33064497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
38-578
               

               
Cow position:
               
chr18:51766074-51765534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
38-592
               

               
Cow position:
               
chr18:50848511-50849065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
130, 141
               

               
Conread position:
               
39-532
               

               
Cow position:
               
chr18:56494021-56494514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
203, 195
               

               
Conread position:
               
39-556
               

               
Cow position:
               
chr18:41197500-41198017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 195
               

               
Conread position:
               
39-560
               

               
Cow position:
               
chr18:56493853-56494374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
39-575
               

               
Cow position:
               
chr18:56433980-56434505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
39-577
               

               
Cow position:
               
chr18:53610542-53610004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
221, 226
               

               
Conread position:
               
39-578
               

               
Cow position:
               
chr18:51813043-51812504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
39-580
               

               
Cow position:
               
chr18:56493937-56494478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
42-553
               

               
Cow position:
               
chr18:40074951-40075462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
42-575
               

               
Cow position:
               
chr18:55008571-55009103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
43-589
               

               
Cow position:
               
chr18:51789628-51789082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 157
               

               
Conread position:
               
46-484
               

               
Cow position:
               
chr18:53636112-53635674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
158, 154
               

               
Conread position:
               
46-484
               

               
Cow position:
               
chr18:56128053-56128491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
301, 290
               

               
Conread position:
               
46-557
               

               
Cow position:
               
chr18:43175592-43175081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-593
               

               
Cow position:
               
chr18:51839545-51838998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
380, 386
               

               
Conread position:
               
54-575
               

               
Cow position:
               
chr18:54992676-54993196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
55-493
               

               
Cow position:
               
chr18:22634665-22635103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
55-579
               

               
Cow position:
               
chr18:55067085-55066561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
55-580
               

               
Cow position:
               
chr18:43093726-43093204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
55-580
               

               
Cow position:
               
chr18:53509263-53509788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
55-580
               

               
Cow position:
               
chr18:53525717-53526242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
57-559
               

               
Cow position:
               
chr18:51400307-51400809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
57-560
               

               
Cow position:
               
chr18:50059596-50059093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
140, 148
               

               
Conread position:
               
57-586
               

               
Cow position:
               
chr18:53559701-53560230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
75-378
               

               
Cow position:
               
chr18:56264922-56264622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
122, 150
               

               
Conread position:
               
84-532
               

               
Cow position:
               
chr18:49022616-49023064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
167, 156
               

               
Conread position:
               
86-581
               

               
Cow position:
               
chr18:51765438-51764943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-587
               

               
Cow position:
               
chr18:51874035-51874529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
462, 114
               

               
Conread position:
               
87-560
               

               
Cow position:
               
chr18:52446759-52447218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
87-575
               

               
Cow position:
               
chr18:43023098-43022610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
87-580
               

               
Cow position:
               
chr18:53498026-53498523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
87-586
               

               
Cow position:
               
chr18:56316106-56316605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
110, 118
               

               
Conread position:
               
91-597
               

               
Cow position:
               
chr18:41949371-41948865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
95-490
               

               
Cow position:
               
chr18:50059306-50058911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 110
               

               
Conread position:
               
95-560
               

               
Cow position:
               
chr18:42790945-42791410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 109
               

               
Conread position:
               
95-587
               

               
Cow position:
               
chr18:42837955-42837463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
95-587
               

               
Cow position:
               
chr18:43120669-43120186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
163, 150
               

               
Conread position:
               
95-587
               

               
Cow position:
               
chr18:50848148-50848640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
96-487
               

               
Cow position:
               
chr18:50271779-50272169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
228, 239
               

               
Conread position:
               
96-494
               

               
Cow position:
               
chr18:55523458-55523856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
96-560
               

               
Cow position:
               
chr18:43167774-43168238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
101, 109
               

               
Conread position:
               
96-575
               

               
Cow position:
               
chr18:56316199-56316677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
234, 223
               

               
Conread position:
               
96-576
               

               
Cow position:
               
chr18:40086954-40086472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
96-577
               

               
Cow position:
               
chr18:40074921-40075402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
96-577
               

               
Cow position:
               
chr18:51765512-51765031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
96-580
               

               
Cow position:
               
chr18:1417984-1418468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
96-580
               

               
Cow position:
               
chr18:51752269-51751785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 80
               

               
Conread position:
               
96-594
               

               
Cow position:
               
chr18:44254073-44253579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 175
               

               
Conread position:
               
97-555
               

               
Cow position:
               
chr18:14454037-14453579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
107, 103
               

               
Conread position:
               
97-575
               

               
Cow position:
               
chr18:44239740-44240217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
98-559
               

               
Cow position:
               
chr18:33093122-33092661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 246
               

               
Conread position:
               
98-593
               

               
Cow position:
               
chr18:42960315-42959820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 107
               

               
Conread position:
               
103-537
               

               
Cow position:
               
chr18:43048739-43048307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 285
               

               
Conread position:
               
103-587
               

               
Cow position:
               
chr18:51368781-51368297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
104-559
               

               
Cow position:
               
chr18:33065032-33064577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
104-587
               

               
Cow position:
               
chr18:44154464-44153979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 483
               

               
Conread position:
               
105-490
               

               
Cow position:
               
chr18:56248245-56247868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
105-597
               

               
Cow position:
               
chr18:52427540-52428032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 204
               

               
Conread position:
               
106-575
               

               
Cow position:
               
chr18:54967696-54968162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
106-575
               

               
Cow position:
               
chr18:54993400-54993868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
107-532
               

               
Cow position:
               
chr18:14453295-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
109-563
               

               
Cow position:
               
chr18:43094165-43093714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
112-575
               

               
Cow position:
               
chr18:56128791-56129252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 92
               

               
Conread position:
               
117-580
               

               
Cow position:
               
chr18:51368601-51368136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
119-383
               

               
Cow position:
               
chr18:43053454-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-588
               

               
Cow position:
               
chr18:49033377-49032908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 81
               

               
Conread position:
               
119-588
               

               
Cow position:
               
chr18:56330182-56329713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 86
               

               
Conread position:
               
119-592
               

               
Cow position:
               
chr18:42791641-42792114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
93, 81
               

               
Conread position:
               
119-596
               

               
Cow position:
               
chr18:51400537-51401014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
121-594
               

               
Cow position:
               
chr18:40306175-40306649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 80
               

               
Conread position:
               
121-597
               

               
Cow position:
               
chr18:44398433-44397956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
122-595
               

               
Cow position:
               
chr18:51766074-51765601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
75, 91
               

               
Conread position:
               
123-580
               

               
Cow position:
               
chr18:51752326-51751869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-580
               

               
Cow position:
               
chr18:51813043-51812586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 115
               

               
Conread position:
               
123-581
               

               
Cow position:
               
chr18:51789884-51789426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
123-596
               

               
Cow position:
               
chr18:41197501-41197973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 5
               

               
Conread position:
               
125-588
               

               
Cow position:
               
chr18:51839550-51839087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
127-490
               

               
Cow position:
               
chr18:50295201-50295564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
130-490
               

               
Cow position:
               
chr18:53636112-53635752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
133-589
               

               
Cow position:
               
chr18:51813114-51812661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
224, 72
               

               
Conread position:
               
141-575
               

               
Cow position:
               
chr18:50059596-50059162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 59
               

               
Conread position:
               
150-587
               

               
Cow position:
               
chr18:42837984-42837547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 362
               

               
Conread position:
               
164-594
               

               
Cow position:
               
chr18:43023105-43022675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
165-577
               

               
Cow position:
               
chr18:40086969-40086561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 189
               

               
Conread position:
               
165-578
               

               
Cow position:
               
chr18:44154487-44154071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 174
               

               
Conread position:
               
165-578
               

               
Cow position:
               
chr18:44184919-44184506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
166-594
               

               
Cow position:
               
chr18:44239725-44240153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
169-556
               

               
Cow position:
               
chr18:54979447-54979834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
171-580
               

               
Cow position:
               
chr18:42985587-42985178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
171-580
               

               
Cow position:
               
chr18:53587110-53586701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
173-495
               

               
Cow position:
               
chr18:56330209-56329890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
175-492
               

               
Cow position:
               
chr18:50059730-50059413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr18:1417814-1418211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
178-597
               

               
Cow position:
               
chr18:40324985-40324569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
180-560
               

               
Cow position:
               
chr18:42827470-42827850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
314, 322
               

               
Conread position:
               
180-560
               

               
Cow position:
               
chr18:50271443-50271823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
181-579
               

               
Cow position:
               
chr18:14454037-14453639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-595
               

               
Cow position:
               
chr18:52427532-52427945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 19
               

               
Conread position:
               
185-587
               

               
Cow position:
               
chr18:43048741-43048339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
187-556
               

               
Cow position:
               
chr18:42744728-42744359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
188-560
               

               
Cow position:
               
chr18:50098965-50099337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
189-588
               

               
Cow position:
               
chr18:53610140-53609741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
190-492
               

               
Cow position:
               
chr18:53509230-53509532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
190-492
               

               
Cow position:
               
chr18:53525684-53525986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
198-558
               

               
Cow position:
               
chr18:33065105-33064746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
203-465
               

               
Cow position:
               
chr18:43053454-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-588
               

               
Cow position:
               
chr18:42827409-42827794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
206-470
               

               
Cow position:
               
chr18:51873708-51873972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
207-586
               

               
Cow position:
               
chr18:51752326-51751947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 137
               

               
Conread position:
               
207-597
               

               
Cow position:
               
chr18:41197500-41197890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 197
               

               
Conread position:
               
211-588
               

               
Cow position:
               
chr18:50295201-50295578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
288, 302
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr18:51400298-51400636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
198, 190
               

               
Conread position:
               
234-597
               

               
Cow position:
               
chr18:42744762-42744402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
236-587
               

               
Cow position:
               
chr18:51873657-51874005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
237-556
               

               
Cow position:
               
chr18:51766124-51765808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
306, 38
               

               
Conread position:
               
243-559
               

               
Cow position:
               
chr18:56248275-56247966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
246-577
               

               
Cow position:
               
chr18:52012477-52012148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
298, 30
               

               
Conread position:
               
250-553
               

               
Cow position:
               
chr18:56330219-56329916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-597
               

               
Cow position:
               
chr18:44254087-44253744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 87
               

               
Conread position:
               
255-485
               

               
Cow position:
               
chr18:40087412-40087182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
116, 124
               

               
Conread position:
               
260-560
               

               
Cow position:
               
chr18:42790942-42791242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
168, 172
               

               
Conread position:
               
260-560
               

               
Cow position:
               
chr18:53636066-53635766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
260-597
               

               
Cow position:
               
chr18:42837958-42837621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
264-580
               

               
Cow position:
               
chr18:40074921-40075237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
275-575
               

               
Cow position:
               
chr18:14453295-14452996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
285-551
               

               
Cow position:
               
chr18:43053456-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
298-595
               

               
Cow position:
               
chr18:51839545-51839248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 121
               

               
Conread position:
               
308-590
               

               
Cow position:
               
chr18:51766137-51765858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
178, 55
               

               
Conread position:
               
339-593
               

               
Cow position:
               
chr18:42837963-42837709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-595
               

               
Cow position:
               
chr18:44184913-44184657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
177, 168
               

               
Conread position:
               
415-595
               

               
Cow position:
               
chr18:44184921-44184741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
422-579
               

               
Cow position:
               
chr18:41949376-41949219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.