Cow genome map
Conread name: | rspc010_k18.y1 |
Conread position: | 1-299 |
Cow position: | chr19:23597420-23597716 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 192 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 280, 0 |
Conread position: | 1-555 |
Cow position: | chr19:23613823-23614377 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-560 |
Cow position: | chr19:14959680-14959132 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 348 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 43, 28 |
Conread position: | 1-560 |
Cow position: | chr19:23613487-23614046 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 87 |
Conread position: | 1-560 |
Cow position: | chr19:23614411-23614970 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 203 |
Conread position: | 1-587 |
Cow position: | chr19:14940043-14940629 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 199 |
Conread position: | 2-437 |
Cow position: | chr19:43570084-43569653 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 3-322 |
Cow position: | chr19:23650115-23650434 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 217 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 196, 201 |
Conread position: | 3-407 |
Cow position: | chr19:14916020-14916419 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 253 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 61, 72 |
Conread position: | 3-485 |
Cow position: | chr19:23649947-23650429 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-518 |
Cow position: | chr19:23614581-23615096 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 201 |
Conread position: | 3-548 |
Cow position: | chr19:23649863-23650408 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 329 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 83, 68 |
Conread position: | 3-551 |
Cow position: | chr19:23597170-23597718 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 72 |
Conread position: | 3-560 |
Cow position: | chr19:14960084-14959543 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 349 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 177, 173 |
Conread position: | 3-560 |
Cow position: | chr19:23613657-23614214 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 231 |
Conread position: | 3-575 |
Cow position: | chr19:23613741-23614312 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 201 |
Conread position: | 3-576 |
Cow position: | chr19:23597086-23597659 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 201 |
Conread position: | 3-586 |
Cow position: | chr19:14940381-14940964 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 5-557 |
Cow position: | chr19:43570249-43569699 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 70 |
Conread position: | 7-534 |
Cow position: | chr19:14960414-14959889 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 158 |
Conread position: | 7-569 |
Cow position: | chr19:14959828-14959283 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 358 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 90, 13 |
Conread position: | 8-560 |
Cow position: | chr19:23613410-23613962 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 508, 497 |
Conread position: | 9-283 |
Cow position: | chr19:14959101-14958827 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 176 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 37, 24 |
Conread position: | 9-453 |
Cow position: | chr19:23650037-23650481 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 282 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 190, 195 |
Conread position: | 9-553 |
Cow position: | chr19:14940219-14940763 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 192 |
Conread position: | 9-555 |
Cow position: | chr19:14959422-14958891 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 334 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 88, 77 |
Conread position: | 9-580 |
Cow position: | chr19:23649785-23650356 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 191 |
Conread position: | 10-362 |
Cow position: | chr19:23614756-23615108 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 226 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-385 |
Cow position: | chr19:20635401-20635026 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 243 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 69, 77 |
Conread position: | 10-560 |
Cow position: | chr19:23614084-23614634 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 224 |
Conread position: | 11-459 |
Cow position: | chr19:14960158-14959714 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 11 |
Conread position: | 11-555 |
Cow position: | chr19:23649451-23649995 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 187 |
Conread position: | 11-575 |
Cow position: | chr19:14940305-14940868 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 117 |
Conread position: | 11-577 |
Cow position: | chr19:14940139-14940703 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 533, 11 |
Conread position: | 11-577 |
Cow position: | chr19:23614505-23615071 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-579 |
Cow position: | chr19:14940473-14941041 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 160 |
Conread position: | 11-593 |
Cow position: | chr19:20677596-20678178 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 193 |
Conread position: | 12-371 |
Cow position: | chr19:14948401-14948042 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 222 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 289, 278 |
Conread position: | 12-553 |
Cow position: | chr19:23613918-23614459 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 192 |
Conread position: | 12-559 |
Cow position: | chr19:23649704-23650251 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 192 |
Conread position: | 12-597 |
Cow position: | chr19:23613582-23614167 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 188 |
Conread position: | 13-439 |
Cow position: | chr19:14940645-14941069 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 9 |
Conread position: | 15-580 |
Cow position: | chr19:23614175-23614738 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 8 |
Conread position: | 22-594 |
Cow position: | chr19:20677859-20678431 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 11 |
Conread position: | 24-548 |
Cow position: | chr19:20678281-20678802 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 9 |
Conread position: | 24-555 |
Cow position: | chr19:20635639-20635108 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 176 |
Conread position: | 29-559 |
Cow position: | chr19:14939986-14940517 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 172 |
Conread position: | 29-560 |
Cow position: | chr19:20677446-20677977 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-485 |
Cow position: | chr19:14948466-14948012 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 279 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 167, 66 |
Conread position: | 30-589 |
Cow position: | chr19:20677951-20678510 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 54 |
Conread position: | 35-361 |
Cow position: | chr19:14940749-14941075 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 213 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 164, 169 |
Conread position: | 35-370 |
Cow position: | chr19:14959153-14958824 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 220 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 35-446 |
Cow position: | chr19:23614697-23615108 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 263 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 164, 169 |
Conread position: | 35-451 |
Cow position: | chr19:14959237-14958827 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 259 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 179, 120 |
Conread position: | 35-553 |
Cow position: | chr19:20677536-20678054 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 49 |
Conread position: | 35-553 |
Cow position: | chr19:23649559-23650077 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 373, 388 |
Conread position: | 35-556 |
Cow position: | chr19:23649643-23650164 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 53 |
Conread position: | 35-559 |
Cow position: | chr19:20635544-20635020 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 477, 482 |
Conread position: | 35-560 |
Cow position: | chr19:20678124-20678649 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 49 |
Conread position: | 35-580 |
Cow position: | chr19:23649307-23649852 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 331 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 45, 31 |
Conread position: | 36-492 |
Cow position: | chr19:14915967-14916420 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 298 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 40, 132 |
Conread position: | 36-518 |
Cow position: | chr19:14940582-14941064 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 168 |
Conread position: | 36-559 |
Cow position: | chr19:23613354-23613877 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 168 |
Conread position: | 36-560 |
Cow position: | chr19:23614026-23614550 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 168 |
Conread position: | 36-593 |
Cow position: | chr19:20678041-20678598 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 51 |
Conread position: | 42-576 |
Cow position: | chr19:20678215-20678746 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 29 |
Conread position: | 63-580 |
Cow position: | chr19:23597062-23597579 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 95-580 |
Cow position: | chr19:14960410-14959927 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 195 |
Conread position: | 97-594 |
Cow position: | chr19:43570398-43569912 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 6 |
Conread position: | 99-534 |
Cow position: | chr19:14959257-14958828 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 290 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 21, 13 |
Conread position: | 107-559 |
Cow position: | chr19:20677440-20677892 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 284 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 107-577 |
Cow position: | chr19:20635640-20635170 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 93 |
Conread position: | 107-580 |
Cow position: | chr19:14915955-14916424 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 309 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 55, 13 |
Conread position: | 114-530 |
Cow position: | chr19:14948466-14948051 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 258 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 90, 62 |
Conread position: | 119-556 |
Cow position: | chr19:20635711-20635275 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 274 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 85, 11 |
Conread position: | 120-597 |
Cow position: | chr19:23613354-23613831 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 168-559 |
Cow position: | chr19:23596833-23597222 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 234 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 17, 170 |
Conread position: | 175-594 |
Cow position: | chr19:14960414-14959997 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 247 |
Conread position: | 179-588 |
Cow position: | chr19:23649285-23649692 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 241 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 85, 19 |
Conread position: | 191-578 |
Cow position: | chr19:20677440-20677827 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 243 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 197-577 |
Cow position: | chr19:14939986-14940367 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 249-559 |
Cow position: | chr19:14960424-14960116 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 257 |
Conread position: | 264-580 |
Cow position: | chr19:14948484-14948169 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 202 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 108, 80 |
Conread position: | 275-595 |
Cow position: | chr19:20635640-20635320 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 212 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 86, 76 |
Conread position: | 299-587 |
Cow position: | chr19:14940005-14940293 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 188 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 244, 240 |
Conread position: | 329-560 |
Cow position: | chr19:23613311-23613542 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 159 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 42, 22 |
Conread position: | 333-560 |
Cow position: | chr19:14960424-14960197 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 162 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 83, 72 |
Show alignments to all cow chromosomes.