Cow genome map


           Conread name:
           rspc010_k18.y1
        

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               280, 0
               

               Conread position:
               1-555
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-560
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               348
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               1-560
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 87
               

               Conread position:
               1-560
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 203
               

               Conread position:
               1-587
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 199
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               3-322
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               196, 201
               

               Conread position:
               3-407
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               3-485
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-518
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 201
               

               Conread position:
               3-548
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               329
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               83, 68
               

               Conread position:
               3-551
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 72
               

               Conread position:
               3-560
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               349
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               177, 173
               

               Conread position:
               3-560
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 231
               

               Conread position:
               3-575
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 201
               

               Conread position:
               3-576
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 201
               

               Conread position:
               3-586
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               5-557
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 70
               

               Conread position:
               7-534
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 158
               

               Conread position:
               7-569
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               358
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               8-560
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               508, 497
               

               Conread position:
               9-283
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               9-453
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               190, 195
               

               Conread position:
               9-553
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 192
               

               Conread position:
               9-555
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               334
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               88, 77
               

               Conread position:
               9-580
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 191
               

               Conread position:
               10-362
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-385
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 77
               

               Conread position:
               10-560
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 224
               

               Conread position:
               11-459
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 11
               

               Conread position:
               11-555
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 187
               

               Conread position:
               11-575
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 117
               

               Conread position:
               11-577
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               533, 11
               

               Conread position:
               11-577
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-579
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 160
               

               Conread position:
               11-593
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 193
               

               Conread position:
               12-371
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               289, 278
               

               Conread position:
               12-553
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 192
               

               Conread position:
               12-559
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 192
               

               Conread position:
               12-597
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 188
               

               Conread position:
               13-439
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 9
               

               Conread position:
               15-580
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 8
               

               Conread position:
               22-594
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               24-548
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               24-555
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 176
               

               Conread position:
               29-559
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 172
               

               Conread position:
               29-560
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-485
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               167, 66
               

               Conread position:
               30-589
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               35-361
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               164, 169
               

               Conread position:
               35-370
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               35-446
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               164, 169
               

               Conread position:
               35-451
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               179, 120
               

               Conread position:
               35-553
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               35-553
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               373, 388
               

               Conread position:
               35-556
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 53
               

               Conread position:
               35-559
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               477, 482
               

               Conread position:
               35-560
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               35-580
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               331
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 31
               

               Conread position:
               36-492
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               40, 132
               

               Conread position:
               36-518
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 168
               

               Conread position:
               36-559
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 168
               

               Conread position:
               36-560
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 168
               

               Conread position:
               36-593
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               42-576
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 29
               

               Conread position:
               63-580
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-580
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 195
               

               Conread position:
               97-594
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 6
               

               Conread position:
               99-534
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               290
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               107-559
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               107-577
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 93
               

               Conread position:
               107-580
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               309
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               114-530
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               119-556
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               85, 11
               

               Conread position:
               120-597
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               168-559
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               17, 170
               

               Conread position:
               175-594
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 247
               

               Conread position:
               179-588
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               191-578
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               197-577
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               249-559
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 257
               

               Conread position:
               264-580
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 80
               

               Conread position:
               275-595
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               86, 76
               

               Conread position:
               299-587
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               244, 240
               

               Conread position:
               329-560
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               333-560
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               83, 72
               
Show alignments to all cow chromosomes.