Cow genome map


           Conread name:
           rspc010_k18.y1
        

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               149, 156
               

               Conread position:
               1-450
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               285
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               203, 198
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 166
               

               Conread position:
               1-554
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 168
               

               Conread position:
               1-555
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 82
               

               Conread position:
               1-559
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 146
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 250
               

               Conread position:
               1-596
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 199
               

               Conread position:
               1-596
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 199
               

               Conread position:
               2-368
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               228, 234
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 198
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 198
               

               Conread position:
               2-560
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               492, 506
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-371
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               3-469
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 76
               

               Conread position:
               3-542
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 114
               

               Conread position:
               3-575
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 197
               

               Conread position:
               3-587
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 241
               

               Conread position:
               3-594
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 256
               

               Conread position:
               5-575
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 201
               

               Conread position:
               5-580
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               338
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               226, 0
               

               Conread position:
               8-361
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               119, 110
               

               Conread position:
               8-556
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 168
               

               Conread position:
               8-559
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 14
               

               Conread position:
               8-559
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 14
               

               Conread position:
               8-597
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 192
               

               Conread position:
               9-293
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               144, 161
               

               Conread position:
               9-560
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 191
               

               Conread position:
               10-492
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               10-555
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               10-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               10-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               11-209
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               11-357
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               11-406
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               11-546
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               337
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               11-555
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 223
               

               Conread position:
               11-587
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               337
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 76
               

               Conread position:
               11-597
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               365
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               149, 170
               

               Conread position:
               12-288
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               187, 192
               

               Conread position:
               12-406
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               164, 156
               

               Conread position:
               12-485
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               301
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               229, 238
               

               Conread position:
               12-495
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               188, 193
               

               Conread position:
               12-497
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               164, 156
               

               Conread position:
               12-542
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 222
               

               Conread position:
               12-545
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 188
               

               Conread position:
               12-553
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 222
               

               Conread position:
               12-559
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 253
               

               Conread position:
               12-560
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               349
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               56, 71
               

               Conread position:
               12-580
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 78
               

               Conread position:
               13-495
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               13-553
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 221
               

               Conread position:
               15-441
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 63
               

               Conread position:
               15-529
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               304
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               188, 181
               

               Conread position:
               15-557
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               333
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 73
               

               Conread position:
               22-560
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               23-485
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               299
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               23-560
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 50
               

               Conread position:
               24-599
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 221
               

               Conread position:
               29-551
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               150, 137
               

               Conread position:
               30-558
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               323
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               149, 137
               

               Conread position:
               30-560
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               337
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               35-451
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               268
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               162, 170
               

               Conread position:
               35-481
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               69, 64
               

               Conread position:
               35-509
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               69, 64
               

               Conread position:
               35-553
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               71, 42
               

               Conread position:
               35-556
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               336
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               71, 42
               

               Conread position:
               35-556
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               35-557
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               35-559
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               330
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               136, 115
               

               Conread position:
               35-559
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               461, 472
               

               Conread position:
               35-581
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 214
               

               Conread position:
               35-587
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 164
               

               Conread position:
               36-490
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               229, 224
               

               Conread position:
               36-493
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               275
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               36-534
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               306
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               37, 43
               

               Conread position:
               36-556
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               330
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               36-559
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 164
               

               Conread position:
               36-578
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               342
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               57, 48
               

               Conread position:
               36-580
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               340
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               110, 133
               

               Conread position:
               37-578
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               38-580
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 162
               

               Conread position:
               45-566
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               310
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               55-580
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               361, 369
               

               Conread position:
               78-565
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 123
               

               Conread position:
               80-569
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 154
               

               Conread position:
               95-580
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               103-559
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 102
               

               Conread position:
               103-559
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               105-595
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               99, 95
               

               Conread position:
               113-558
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               117-553
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 82
               

               Conread position:
               120-593
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 80
               

               Conread position:
               124-595
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 88
               

               Conread position:
               130-559
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               118, 104
               

               Conread position:
               165-587
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               379, 371
               

               Conread position:
               181-594
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               237, 224
               

               Conread position:
               199-580
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               264-589
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               298-597
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               346-581
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.