Cow genome map

Conread name: rspc010_k18.y1

Conread position: 1-304
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 198, 203

Conread position: 1-392
Cow position:
Alignm length: 400
Alignm identity: 264
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 82

Conread position: 1-553
Cow position:
Alignm length: 558
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 2-556
Cow position:
Alignm length: 561
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 110

Conread position: 2-559
Cow position:
Alignm length: 559
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 541, 332

Conread position: 2-560
Cow position:
Alignm length: 561
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 31

Conread position: 3-285
Cow position:
Alignm length: 285
Alignm identity: 179
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 196, 201

Conread position: 3-438
Cow position:
Alignm length: 440
Alignm identity: 284
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 196, 201

Conread position: 3-451
Cow position:
Alignm length: 449
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-475
Cow position:
Alignm length: 475
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 75

Conread position: 3-490
Cow position:
Alignm length: 493
Alignm identity: 314
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 5

Conread position: 3-542
Cow position:
Alignm length: 542
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 400

Conread position: 3-554
Cow position:
Alignm length: 555
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 3-559
Cow position:
Alignm length: 562
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 72

Conread position: 7-583
Cow position:
Alignm length: 579
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 25

Conread position: 8-537
Cow position:
Alignm length: 533
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 150

Conread position: 9-259
Cow position:
Alignm length: 252
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 171, 160

Conread position: 10-365
Cow position:
Alignm length: 358
Alignm identity: 240
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 140, 152

Conread position: 10-376
Cow position:
Alignm length: 368
Alignm identity: 229
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 270, 281

Conread position: 10-440
Cow position:
Alignm length: 435
Alignm identity: 265
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 53

Conread position: 10-459
Cow position:
Alignm length: 452
Alignm identity: 285
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 189, 194

Conread position: 10-580
Cow position:
Alignm length: 573
Alignm identity: 343
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 187, 194

Conread position: 11-376
Cow position:
Alignm length: 368
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 189

Conread position: 11-445
Cow position:
Alignm length: 437
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 193

Conread position: 11-598
Cow position:
Alignm length: 592
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 110

Conread position: 12-392
Cow position:
Alignm length: 383
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 226

Conread position: 12-534
Cow position:
Alignm length: 525
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 225

Conread position: 22-361
Cow position:
Alignm length: 341
Alignm identity: 219
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 229, 233

Conread position: 22-529
Cow position:
Alignm length: 509
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 306

Conread position: 35-476
Cow position:
Alignm length: 444
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 196

Conread position: 35-554
Cow position:
Alignm length: 524
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 130

Conread position: 36-349
Cow position:
Alignm length: 317
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 45

Conread position: 36-368
Cow position:
Alignm length: 335
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 161, 168

Conread position: 36-492
Cow position:
Alignm length: 458
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 45

Conread position: 36-580
Cow position:
Alignm length: 549
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 198

Conread position: 41-387
Cow position:
Alignm length: 349
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 76

Conread position: 43-587
Cow position:
Alignm length: 547
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 36

Conread position: 48-559
Cow position:
Alignm length: 517
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 25

Conread position: 48-580
Cow position:
Alignm length: 538
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 34

Conread position: 55-445
Cow position:
Alignm length: 394
Alignm identity: 254
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 8

Conread position: 55-565
Cow position:
Alignm length: 516
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 8

Conread position: 57-583
Cow position:
Alignm length: 533
Alignm identity: 335
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 142, 147

Conread position: 95-553
Cow position:
Alignm length: 463
Alignm identity: 296
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 22

Conread position: 112-560
Cow position:
Alignm length: 451
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 88

Conread position: 126-448
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 82, 74

Conread position: 126-559
Cow position:
Alignm length: 437
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 74

Conread position: 131-594
Cow position:
Alignm length: 466
Alignm identity: 285
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 74

Conread position: 132-560
Cow position:
Alignm length: 431
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 68

Conread position: 132-578
Cow position:
Alignm length: 449
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 186

Conread position: 139-529
Cow position:
Alignm length: 393
Alignm identity: 256
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 126, 116

Conread position: 140-553
Cow position:
Alignm length: 416
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 19

Conread position: 190-587
Cow position:
Alignm length: 400
Alignm identity: 243
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 38

Conread position: 209-581
Cow position:
Alignm length: 376
Alignm identity: 240
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 207, 195

Conread position: 210-578
Cow position:
Alignm length: 370
Alignm identity: 244
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 206, 195

Conread position: 216-587
Cow position:
Alignm length: 375
Alignm identity: 239
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 211, 189

Conread position: 222-546
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 127, 122

Conread position: 252-580
Cow position:
Alignm length: 333
Alignm identity: 217
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 5, 25

Conread position: 262-559
Cow position:
Alignm length: 300
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 187, 193

Conread position: 279-559
Cow position:
Alignm length: 282
Alignm identity: 183
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 229, 210

Conread position: 279-577
Cow position:
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 263, 255

Conread position: 285-578
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 129, 121

Conread position: 288-559
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 300-598
Cow position:
Alignm length: 300
Alignm identity: 187
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 243, 239

Conread position: 307-580
Cow position:
Alignm length: 275
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 237, 229

Conread position: 332-596
Cow position:
Alignm length: 266
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 168, 157

Conread position: 347-596
Cow position:
Alignm length: 250
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.