Cow genome map
| Conread name: | rspc010_k18.y1 |
| Conread position: | 1-445 |
| Cow position: | chr28:7757888-7758332 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 81 |
| Conread position: | 1-461 |
| Cow position: | chr28:9253155-9253615 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 1-556 |
| Cow position: | chr28:7810400-7810946 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 344 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 156, 135 |
| Conread position: | 1-560 |
| Cow position: | chr28:11334085-11333526 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 332 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 65, 86 |
| Conread position: | 2-349 |
| Cow position: | chr28:33210281-33210629 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 3-389 |
| Cow position: | chr28:7810561-7810947 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 194, 201 |
| Conread position: | 3-491 |
| Cow position: | chr28:9299037-9299511 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 76, 68 |
| Conread position: | 3-531 |
| Cow position: | chr28:34679588-34679070 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 335 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 5-484 |
| Cow position: | chr28:34696051-34696531 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 170 |
| Conread position: | 7-532 |
| Cow position: | chr28:9253077-9253602 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 227 |
| Conread position: | 7-546 |
| Cow position: | chr28:7757558-7758097 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 7-575 |
| Cow position: | chr28:7757474-7758042 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 7-587 |
| Cow position: | chr28:7757726-7758306 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 7-597 |
| Cow position: | chr28:7758146-7758720 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 341 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 61, 76 |
| Conread position: | 8-446 |
| Cow position: | chr28:9299280-9299716 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 145, 157 |
| Conread position: | 10-559 |
| Cow position: | chr28:9252911-9253461 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 10-560 |
| Cow position: | chr28:7810325-7810866 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 65 |
| Conread position: | 11-485 |
| Cow position: | chr28:9298712-9299183 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 76, 60 |
| Conread position: | 11-529 |
| Cow position: | chr28:7757814-7758332 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 72 |
| Conread position: | 11-596 |
| Cow position: | chr28:9290066-9290645 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 64 |
| Conread position: | 12-494 |
| Cow position: | chr28:7758387-7758869 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 299 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 28-490 |
| Cow position: | chr28:9299216-9299675 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 169, 176 |
| Conread position: | 35-554 |
| Cow position: | chr28:11334135-11333616 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 313, 302 |
| Conread position: | 35-556 |
| Cow position: | chr28:7757418-7757939 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 35-574 |
| Cow position: | chr28:7757670-7758209 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 35-594 |
| Cow position: | chr28:7757334-7757893 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 36-580 |
| Cow position: | chr28:9253022-9253566 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 37-575 |
| Cow position: | chr28:9298988-9299511 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 160, 49 |
| Conread position: | 42-409 |
| Cow position: | chr28:9290345-9290709 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 209, 29 |
| Conread position: | 43-542 |
| Cow position: | chr28:7758334-7758831 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 288 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 55-587 |
| Cow position: | chr28:7810286-7810809 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 335 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 443, 230 |
| Conread position: | 86-473 |
| Cow position: | chr28:7810560-7810947 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 157, 148 |
| Conread position: | 86-587 |
| Cow position: | chr28:34679589-34679098 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 103-556 |
| Cow position: | chr28:11334151-11333698 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 114-555 |
| Cow position: | chr28:9298564-9299002 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 54, 92 |
| Conread position: | 120-523 |
| Cow position: | chr28:33210231-33210635 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 340, 0 |
| Conread position: | 120-560 |
| Cow position: | chr28:9252938-9253378 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 84 |
| Conread position: | 127-587 |
| Cow position: | chr28:7758334-7758793 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 81, 74 |
| Conread position: | 165-560 |
| Cow position: | chr28:34679594-34679198 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 80, 35 |
| Conread position: | 222-470 |
| Cow position: | chr28:7810285-7810533 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 110, 96 |
Show alignments to all cow chromosomes.