Cow genome map
| Conread name: | rspc010_k18.y1 |
| Conread position: | 1-277 |
| Cow position: | chr3:68046073-68046349 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 196, 203 |
| Conread position: | 2-281 |
| Cow position: | chr3:62721852-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 122, 115 |
| Conread position: | 2-517 |
| Cow position: | chr3:68045822-68046337 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 2-594 |
| Cow position: | chr3:62742830-62743401 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 176 |
| Conread position: | 3-533 |
| Cow position: | chr3:62722103-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 197 |
| Conread position: | 3-556 |
| Cow position: | chr3:62722187-62721634 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 250 |
| Conread position: | 3-560 |
| Cow position: | chr3:68027146-68027703 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 175 |
| Conread position: | 3-593 |
| Cow position: | chr3:62742916-62743484 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 3-603 |
| Cow position: | chr3:62742416-62743012 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 110 |
| Conread position: | 4-525 |
| Cow position: | chr3:68027231-68027752 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 8-554 |
| Cow position: | chr3:62742589-62743114 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 24 |
| Conread position: | 8-579 |
| Cow position: | chr3:62722264-62721695 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 8-594 |
| Cow position: | chr3:62742254-62742834 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 10-401 |
| Cow position: | chr3:77350851-77350473 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 238, 160 |
| Conread position: | 10-559 |
| Cow position: | chr3:62722348-62721799 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 107 |
| Conread position: | 11-556 |
| Cow position: | chr3:68045665-68046208 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 11 |
| Conread position: | 11-588 |
| Cow position: | chr3:68045747-68046324 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 155 |
| Conread position: | 12-559 |
| Cow position: | chr3:77351177-77350641 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 13-361 |
| Cow position: | chr3:68046003-68046349 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 184, 9 |
| Conread position: | 24-445 |
| Cow position: | chr3:68045928-68046349 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-560 |
| Cow position: | chr3:68027010-68027535 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 35-593 |
| Cow position: | chr3:68027094-68027652 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 201 |
| Conread position: | 36-580 |
| Cow position: | chr3:68045604-68046148 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 282 |
| Conread position: | 95-560 |
| Cow position: | chr3:62722347-62721882 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 98-565 |
| Cow position: | chr3:68026990-68027456 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 165-596 |
| Cow position: | chr3:62722361-62721931 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 185-407 |
| Cow position: | chr3:16020395-16020177 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 196-580 |
| Cow position: | chr3:68045595-68045980 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 249-580 |
| Cow position: | chr3:68045565-68045896 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 315, 325 |
| Conread position: | 262-494 |
| Cow position: | chr3:16020402-16020173 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 145, 158 |
| Conread position: | 353-593 |
| Cow position: | chr3:16020395-16020159 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 219, 180 |
Show alignments to all cow chromosomes.