Cow genome map

Conread name: rspc010_k18.y1

Conread position: 1-277
Cow position: chr3:68046073-68046349 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 177
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 196, 203

Conread position: 2-281
Cow position: chr3:62721852-62721573 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 115

Conread position: 2-517
Cow position: chr3:68045822-68046337 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 78

Conread position: 2-594
Cow position: chr3:62742830-62743401 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 176

Conread position: 3-533
Cow position: chr3:62722103-62721573 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 197

Conread position: 3-556
Cow position: chr3:62722187-62721634 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 250

Conread position: 3-560
Cow position: chr3:68027146-68027703 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 175

Conread position: 3-593
Cow position: chr3:62742916-62743484 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 23

Conread position: 3-603
Cow position: chr3:62742416-62743012 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 110

Conread position: 4-525
Cow position: chr3:68027231-68027752 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 20

Conread position: 8-554
Cow position: chr3:62742589-62743114 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 24

Conread position: 8-579
Cow position: chr3:62722264-62721695 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 14

Conread position: 8-594
Cow position: chr3:62742254-62742834 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 25

Conread position: 10-401
Cow position: chr3:77350851-77350473 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 246
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 238, 160

Conread position: 10-559
Cow position: chr3:62722348-62721799 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 107

Conread position: 11-556
Cow position: chr3:68045665-68046208 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 11

Conread position: 11-588
Cow position: chr3:68045747-68046324 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 155

Conread position: 12-559
Cow position: chr3:77351177-77350641 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 332
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 59

Conread position: 13-361
Cow position: chr3:68046003-68046349 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 215
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 184, 9

Conread position: 24-445
Cow position: chr3:68045928-68046349 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 264
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 35-560
Cow position: chr3:68027010-68027535 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 17

Conread position: 35-593
Cow position: chr3:68027094-68027652 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 201

Conread position: 36-580
Cow position: chr3:68045604-68046148 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 282

Conread position: 95-560
Cow position: chr3:62722347-62721882 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 98-565
Cow position: chr3:68026990-68027456 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 11

Conread position: 165-596
Cow position: chr3:62722361-62721931 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 21

Conread position: 185-407
Cow position: chr3:16020395-16020177 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 14

Conread position: 196-580
Cow position: chr3:68045595-68045980 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 250
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 13, 95

Conread position: 249-580
Cow position: chr3:68045565-68045896 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 315, 325

Conread position: 262-494
Cow position: chr3:16020402-16020173 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 145, 158

Conread position: 353-593
Cow position: chr3:16020395-16020159 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 219, 180

Show alignments to all cow chromosomes.