Cow genome map


           Conread name:
           rspc010_k18.y1
        

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               207, 199
               

               Conread position:
               2-219
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 86
               

               Conread position:
               2-409
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               346, 341
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 97
               

               Conread position:
               2-560
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 198
               

               Conread position:
               2-580
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 31
               

               Conread position:
               2-586
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 0
               

               Conread position:
               2-588
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 316
               

               Conread position:
               3-553
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 197
               

               Conread position:
               3-556
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 94
               

               Conread position:
               3-559
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               3-560
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 0
               

               Conread position:
               3-575
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 197
               

               Conread position:
               7-556
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               8-406
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               10-407
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               189, 194
               

               Conread position:
               10-556
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               10-557
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               343
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               10, 16
               

               Conread position:
               10-580
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 194
               

               Conread position:
               11-323
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               11-531
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 189
               

               Conread position:
               11-543
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 193
               

               Conread position:
               11-548
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               11-551
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 6
               

               Conread position:
               11-555
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 73
               

               Conread position:
               11-556
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               347
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               188, 195
               

               Conread position:
               11-560
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 189
               

               Conread position:
               11-575
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               532, 60
               

               Conread position:
               11-587
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 86
               

               Conread position:
               11-593
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               11-596
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 106
               

               Conread position:
               11-598
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               12-551
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 105
               

               Conread position:
               15-580
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 7
               

               Conread position:
               23-406
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               97, 91
               

               Conread position:
               24-490
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               29-559
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               29-589
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 132
               

               Conread position:
               35-350
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               142, 134
               

               Conread position:
               35-453
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 165
               

               Conread position:
               35-497
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 128
               

               Conread position:
               35-551
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               142, 131
               

               Conread position:
               35-554
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               373, 384
               

               Conread position:
               35-555
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 82
               

               Conread position:
               35-559
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               321
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               63, 42
               

               Conread position:
               35-560
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               323
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               140, 163
               

               Conread position:
               35-560
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               61, 51
               

               Conread position:
               35-560
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               35-560
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               329
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               35-578
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               335
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               147, 135
               

               Conread position:
               35-595
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               36-531
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               161, 169
               

               Conread position:
               36-554
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 63
               

               Conread position:
               36-556
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               36-580
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               38-449
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               277
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               161, 166
               

               Conread position:
               38-560
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 54
               

               Conread position:
               38-575
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               338
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               139, 128
               

               Conread position:
               38-578
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               339
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               38-578
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               334
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               82, 77
               

               Conread position:
               38-580
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               347
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               47, 59
               

               Conread position:
               39-560
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               42-494
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 42
               

               Conread position:
               44-556
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               48-587
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 152
               

               Conread position:
               85-559
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 120
               

               Conread position:
               95-491
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               102, 110
               

               Conread position:
               95-597
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               102, 110
               

               Conread position:
               103-590
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               308
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               113-560
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 53
               

               Conread position:
               119-560
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               425, 420
               

               Conread position:
               120-449
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               84, 80
               

               Conread position:
               120-560
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               284
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               8, 81
               

               Conread position:
               147-605
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               172-560
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               179-560
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               319, 310
               

               Conread position:
               181-555
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               114, 104
               

               Conread position:
               196-556
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 54
               

               Conread position:
               198-593
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               61, 6
               

               Conread position:
               204-556
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               216-594
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.