Cow genome map
| Conread name: | rspc010_k18.y1 |
| Conread position: | 1-406 |
| Cow position: | chr8:48406654-48406240 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 1-563 |
| Cow position: | chr8:46816433-46816995 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 199 |
| Conread position: | 1-594 |
| Cow position: | chr8:48407074-48406481 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 2-480 |
| Cow position: | chr8:48406737-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 420 |
| Conread position: | 2-534 |
| Cow position: | chr8:55581127-55581659 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 198 |
| Conread position: | 3-401 |
| Cow position: | chr8:6958026-6957629 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 224, 0 |
| Conread position: | 3-484 |
| Cow position: | chr8:55581212-55581693 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 201 |
| Conread position: | 3-564 |
| Cow position: | chr8:48407324-48406763 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 422, 405 |
| Conread position: | 3-583 |
| Cow position: | chr8:48406904-48406324 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 355 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 239, 259 |
| Conread position: | 8-282 |
| Cow position: | chr8:46817112-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 142, 157 |
| Conread position: | 8-556 |
| Cow position: | chr8:45200993-45201541 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 8-579 |
| Cow position: | chr8:48407571-48407000 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 192 |
| Conread position: | 8-594 |
| Cow position: | chr8:46815606-46816186 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 354 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 10-556 |
| Cow position: | chr8:55581051-55581597 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 194 |
| Conread position: | 10-560 |
| Cow position: | chr8:45201415-45201965 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 308 |
| Conread position: | 10-585 |
| Cow position: | chr8:48407485-48406910 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 195 |
| Conread position: | 11-319 |
| Cow position: | chr8:45201668-45201976 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 136, 141 |
| Conread position: | 11-540 |
| Cow position: | chr8:46816863-46817392 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 106 |
| Conread position: | 11-553 |
| Cow position: | chr8:46816191-46816733 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-554 |
| Cow position: | chr8:46816695-46817236 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 528, 0 |
| Conread position: | 11-555 |
| Cow position: | chr8:46816779-46817323 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 189 |
| Conread position: | 11-556 |
| Cow position: | chr8:45201248-45201793 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 225 |
| Conread position: | 11-559 |
| Cow position: | chr8:46816359-46816907 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 11-587 |
| Cow position: | chr8:46816023-46816599 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 86 |
| Conread position: | 11-596 |
| Cow position: | chr8:46816527-46817112 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 12-322 |
| Cow position: | chr8:55581389-55581699 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 12-594 |
| Cow position: | chr8:46816108-46816690 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 482, 496 |
| Conread position: | 35-555 |
| Cow position: | chr8:55580908-55581428 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 475, 461 |
| Conread position: | 35-556 |
| Cow position: | chr8:45200936-45201457 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 35-587 |
| Cow position: | chr8:45201188-45201740 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 169 |
| Conread position: | 35-594 |
| Cow position: | chr8:45201104-45201663 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 199 |
| Conread position: | 35-595 |
| Cow position: | chr8:55580992-55581552 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 169 |
| Conread position: | 36-553 |
| Cow position: | chr8:46816636-46817153 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 168 |
| Conread position: | 36-561 |
| Cow position: | chr8:45201525-45202043 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 198 |
| Conread position: | 38-587 |
| Cow position: | chr8:45201359-45201908 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 43-594 |
| Cow position: | chr8:48407620-48407069 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-580 |
| Cow position: | chr8:55580843-55581369 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 55-486 |
| Cow position: | chr8:6958058-6957628 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 119-560 |
| Cow position: | chr8:45200936-45201377 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 115 |
| Conread position: | 119-578 |
| Cow position: | chr8:48407628-48407169 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 58 |
| Conread position: | 120-535 |
| Cow position: | chr8:48406703-48406288 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 126-581 |
| Cow position: | chr8:46815883-46816341 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 131-588 |
| Cow position: | chr8:55580752-55581209 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 69, 82 |
| Conread position: | 139-542 |
| Cow position: | chr8:6958058-6957657 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 65, 61 |
| Conread position: | 180-575 |
| Cow position: | chr8:45200913-45201307 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 264 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 194-594 |
| Cow position: | chr8:55580731-55581131 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 222-555 |
| Cow position: | chr8:6958059-6957727 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 321, 275 |
| Conread position: | 307-534 |
| Cow position: | chr8:6958058-6957831 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-594 |
| Cow position: | chr8:6958060-6957855 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 185, 175 |
Show alignments to all cow chromosomes.