Cow genome map
| Conread name: | rspc012_d20.y1 |
| Conread position: | 2-490 |
| Cow position: | chr1:34688840-34689296 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 97 |
| Conread position: | 3-309 |
| Cow position: | chr1:94659365-94659660 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 299, 46 |
| Conread position: | 3-314 |
| Cow position: | chr1:72079970-72080265 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-348 |
| Cow position: | chr1:11863790-11863441 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 66, 127 |
| Conread position: | 3-408 |
| Cow position: | chr1:72119648-72120030 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 3-466 |
| Cow position: | chr1:55324039-55323583 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 3-466 |
| Cow position: | chr1:101149341-101149771 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 54 |
| Conread position: | 3-487 |
| Cow position: | chr1:18244899-18244422 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 170 |
| Conread position: | 3-487 |
| Cow position: | chr1:62245162-62244690 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 71 |
| Conread position: | 3-488 |
| Cow position: | chr1:79637454-79636971 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 12 |
| Conread position: | 3-488 |
| Cow position: | chr1:93854009-93854479 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 68 |
| Conread position: | 3-489 |
| Cow position: | chr1:42735945-42736416 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 71 |
| Conread position: | 3-490 |
| Cow position: | chr1:3386518-3386046 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 71 |
| Conread position: | 3-490 |
| Cow position: | chr1:22000464-21999995 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 71 |
| Conread position: | 3-490 |
| Cow position: | chr1:25180543-25180070 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 46 |
| Conread position: | 3-490 |
| Cow position: | chr1:33550410-33550879 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 3-490 |
| Cow position: | chr1:40514005-40513540 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 41 |
| Conread position: | 3-490 |
| Cow position: | chr1:55775646-55776114 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 46 |
| Conread position: | 3-490 |
| Cow position: | chr1:56194443-56193971 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 3-490 |
| Cow position: | chr1:57367644-57367172 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 45 |
| Conread position: | 3-490 |
| Cow position: | chr1:58335324-58335797 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 71 |
| Conread position: | 3-490 |
| Cow position: | chr1:62806315-62805845 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 46 |
| Conread position: | 3-490 |
| Cow position: | chr1:63606295-63605821 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 71 |
| Conread position: | 3-490 |
| Cow position: | chr1:69402481-69402953 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 46 |
| Conread position: | 3-490 |
| Cow position: | chr1:69922975-69922504 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 71 |
| Conread position: | 3-490 |
| Cow position: | chr1:76753161-76752692 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 71 |
| Conread position: | 3-490 |
| Cow position: | chr1:86699732-86699257 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 71 |
| Conread position: | 3-490 |
| Cow position: | chr1:87244296-87244754 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 3-490 |
| Cow position: | chr1:97227220-97226745 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 3-490 |
| Cow position: | chr1:100597894-100597421 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 46 |
| Conread position: | 3-490 |
| Cow position: | chr1:102435540-102435066 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 46 |
| Conread position: | 4-490 |
| Cow position: | chr1:62925088-62925574 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 130 |
| Conread position: | 4-490 |
| Cow position: | chr1:85881241-85881703 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 8 |
| Conread position: | 7-490 |
| Cow position: | chr1:67835665-67835178 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 327 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 80, 269 |
| Conread position: | 12-490 |
| Cow position: | chr1:17013264-17012775 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 262 |
| Conread position: | 15-243 |
| Cow position: | chr1:40907620-40907845 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 111 |
| Conread position: | 15-369 |
| Cow position: | chr1:37420474-37420135 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 49 |
| Conread position: | 15-466 |
| Cow position: | chr1:8824555-8824996 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 15-473 |
| Cow position: | chr1:67286006-67286432 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 111 |
| Conread position: | 15-490 |
| Cow position: | chr1:13253931-13253477 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 59 |
| Conread position: | 15-490 |
| Cow position: | chr1:31366594-31366116 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 16-443 |
| Cow position: | chr1:67902936-67902508 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 16-488 |
| Cow position: | chr1:20828379-20828848 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 118 |
| Conread position: | 16-489 |
| Cow position: | chr1:89740728-89740285 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 30-490 |
| Cow position: | chr1:33711566-33712024 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 45 |
| Conread position: | 36-443 |
| Cow position: | chr1:5318286-5318674 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 276 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 263, 14 |
| Conread position: | 44-490 |
| Cow position: | chr1:25549581-25550024 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 17 |
| Conread position: | 50-490 |
| Cow position: | chr1:72980807-72981228 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 14 |
| Conread position: | 50-490 |
| Cow position: | chr1:85781255-85780817 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 50-490 |
| Cow position: | chr1:88130286-88130719 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 14 |
| Conread position: | 59-490 |
| Cow position: | chr1:21086942-21087374 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 60-336 |
| Cow position: | chr1:97560252-97560526 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 60-338 |
| Cow position: | chr1:30284059-30283792 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 60-348 |
| Cow position: | chr1:58223834-58224116 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 203 |
| Conread position: | 60-371 |
| Cow position: | chr1:8027609-8027301 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 284 |
| Conread position: | 60-380 |
| Cow position: | chr1:99995560-99995243 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 21, 224 |
| Conread position: | 60-407 |
| Cow position: | chr1:52172938-52172594 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 206 |
| Conread position: | 60-433 |
| Cow position: | chr1:30023657-30023287 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 60-440 |
| Cow position: | chr1:53198325-53198704 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 284 |
| Conread position: | 60-475 |
| Cow position: | chr1:87449486-87449899 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 60-487 |
| Cow position: | chr1:56162864-56163284 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 201 |
| Conread position: | 60-488 |
| Cow position: | chr1:91898542-91898957 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 60-489 |
| Cow position: | chr1:33850793-33851239 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 60-489 |
| Cow position: | chr1:56722665-56723115 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 213 |
| Conread position: | 60-489 |
| Cow position: | chr1:89425124-89425547 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 60-489 |
| Cow position: | chr1:91719105-91718674 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 286 |
| Conread position: | 60-490 |
| Cow position: | chr1:13449724-13450169 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 206 |
| Conread position: | 60-490 |
| Cow position: | chr1:17037018-17036597 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 196 |
| Conread position: | 60-490 |
| Cow position: | chr1:18880851-18880432 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 60-490 |
| Cow position: | chr1:28872611-28873038 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 205 |
| Conread position: | 60-490 |
| Cow position: | chr1:31395956-31396374 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 60-490 |
| Cow position: | chr1:39543304-39543732 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 213 |
| Conread position: | 60-490 |
| Cow position: | chr1:40052892-40053316 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 221 |
| Conread position: | 60-490 |
| Cow position: | chr1:40685152-40684730 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 213 |
| Conread position: | 60-490 |
| Cow position: | chr1:43019665-43020084 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 17 |
| Conread position: | 60-490 |
| Cow position: | chr1:55276946-55276525 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 201 |
| Conread position: | 60-490 |
| Cow position: | chr1:56489380-56489801 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 196 |
| Conread position: | 60-490 |
| Cow position: | chr1:59210601-59210178 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 213 |
| Conread position: | 60-490 |
| Cow position: | chr1:61308544-61308963 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 60-490 |
| Cow position: | chr1:71563034-71562617 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 179 |
| Conread position: | 60-490 |
| Cow position: | chr1:79336261-79335844 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 60-490 |
| Cow position: | chr1:79921194-79920766 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 168 |
| Conread position: | 60-490 |
| Cow position: | chr1:80359632-80359209 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 200 |
| Conread position: | 60-490 |
| Cow position: | chr1:82564040-82564464 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 60-490 |
| Cow position: | chr1:82652177-82652597 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 60-490 |
| Cow position: | chr1:86548589-86548173 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 201 |
| Conread position: | 61-459 |
| Cow position: | chr1:76623410-76623018 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 204 |
| Conread position: | 61-490 |
| Cow position: | chr1:11292571-11292143 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 213 |
| Conread position: | 61-490 |
| Cow position: | chr1:76546004-76545582 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 121 |
| Conread position: | 62-404 |
| Cow position: | chr1:88759101-88759441 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 20, 212 |
| Conread position: | 62-490 |
| Cow position: | chr1:57656094-57656509 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 207 |
| Conread position: | 62-490 |
| Cow position: | chr1:85791233-85791648 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 81-462 |
| Cow position: | chr1:1461770-1461394 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 51 |
| Conread position: | 81-490 |
| Cow position: | chr1:5501533-5501936 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 91 |
| Conread position: | 81-490 |
| Cow position: | chr1:49974633-49974230 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 197 |
| Conread position: | 81-490 |
| Cow position: | chr1:57567505-57567911 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 184 |
| Conread position: | 81-490 |
| Cow position: | chr1:72187317-72186912 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 185 |
| Conread position: | 81-490 |
| Cow position: | chr1:77163336-77163740 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 169, 155 |
| Conread position: | 81-490 |
| Cow position: | chr1:79457412-79457007 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 184 |
| Conread position: | 91-466 |
| Cow position: | chr1:76703799-76703440 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 16 |
| Conread position: | 93-490 |
| Cow position: | chr1:63501027-63501419 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 39, 195 |
| Conread position: | 94-466 |
| Cow position: | chr1:62854263-62853905 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 182 |
| Conread position: | 94-490 |
| Cow position: | chr1:82919080-82918701 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 38 |
| Conread position: | 102-281 |
| Cow position: | chr1:79108689-79108864 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 102-488 |
| Cow position: | chr1:18014614-18014231 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 205 |
| Conread position: | 104-440 |
| Cow position: | chr1:20988347-20988671 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 229, 163 |
| Conread position: | 104-489 |
| Cow position: | chr1:86608782-86609154 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 177 |
| Conread position: | 104-490 |
| Cow position: | chr1:17942234-17941850 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 230 |
| Conread position: | 105-441 |
| Cow position: | chr1:84148994-84149324 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 105-443 |
| Cow position: | chr1:68219269-68218929 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 108-380 |
| Cow position: | chr1:30058134-30058399 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 113-344 |
| Cow position: | chr1:3934566-3934348 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 114-487 |
| Cow position: | chr1:68607960-68607590 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 151 |
| Conread position: | 129-404 |
| Cow position: | chr1:8330413-8330149 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 132-443 |
| Cow position: | chr1:102555698-102556000 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 69, 77 |
| Conread position: | 132-490 |
| Cow position: | chr1:89771070-89770722 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 42 |
| Conread position: | 132-493 |
| Cow position: | chr1:69287950-69287600 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 141 |
| Conread position: | 134-490 |
| Cow position: | chr1:28801818-28801459 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 138 |
| Conread position: | 139-466 |
| Cow position: | chr1:30027916-30027606 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 270, 10 |
| Conread position: | 139-490 |
| Cow position: | chr1:101858369-101858023 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 135 |
| Conread position: | 142-490 |
| Cow position: | chr1:69766088-69766423 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 118 |
| Conread position: | 144-296 |
| Cow position: | chr1:102548825-102548973 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 145-419 |
| Cow position: | chr1:28722411-28722682 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 264, 133 |
| Conread position: | 145-490 |
| Cow position: | chr1:38414431-38414761 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 54 |
| Conread position: | 146-463 |
| Cow position: | chr1:87968969-87969281 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 147-284 |
| Cow position: | chr1:37455334-37455470 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 147-484 |
| Cow position: | chr1:98661670-98661341 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 107 |
| Conread position: | 147-490 |
| Cow position: | chr1:52233476-52233151 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 148-466 |
| Cow position: | chr1:59933169-59933489 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 116, 44 |
| Conread position: | 152-464 |
| Cow position: | chr1:18406572-18406255 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 202 |
| Conread position: | 153-422 |
| Cow position: | chr1:46835010-46835267 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 161, 52 |
| Conread position: | 155-437 |
| Cow position: | chr1:13645351-13645639 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 111, 200 |
| Conread position: | 155-440 |
| Cow position: | chr1:40953340-40953621 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 51 |
| Conread position: | 155-466 |
| Cow position: | chr1:42290033-42290332 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 66 |
| Conread position: | 155-490 |
| Cow position: | chr1:69536532-69536863 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 198 |
| Conread position: | 155-490 |
| Cow position: | chr1:72656612-72656942 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 109 |
| Conread position: | 155-490 |
| Cow position: | chr1:89809997-89809661 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 187 |
| Conread position: | 155-490 |
| Cow position: | chr1:89900072-89899741 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 117 |
| Conread position: | 155-490 |
| Cow position: | chr1:97123462-97123793 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 117 |
| Conread position: | 159-441 |
| Cow position: | chr1:25887498-25887244 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 145, 46 |
| Conread position: | 160-490 |
| Cow position: | chr1:52918973-52918659 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 186, 99 |
| Conread position: | 164-466 |
| Cow position: | chr1:59674127-59674426 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 124 |
| Conread position: | 165-437 |
| Cow position: | chr1:57661181-57661449 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 243, 21 |
| Conread position: | 165-490 |
| Cow position: | chr1:88635017-88635332 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 107 |
| Conread position: | 173-490 |
| Cow position: | chr1:78359845-78360147 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 116 |
| Conread position: | 174-490 |
| Cow position: | chr1:87207775-87207456 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 93, 187 |
| Conread position: | 177-489 |
| Cow position: | chr1:54366161-54365864 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 184-490 |
| Cow position: | chr1:33895336-33895640 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 158 |
| Conread position: | 204-490 |
| Cow position: | chr1:56144652-56144377 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 204, 74 |
| Conread position: | 205-498 |
| Cow position: | chr1:13879816-13880106 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 226-466 |
| Cow position: | chr1:40307771-40308001 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 183, 41 |
| Conread position: | 233-449 |
| Cow position: | chr1:29361715-29361928 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 176, 50 |
| Conread position: | 240-461 |
| Cow position: | chr1:99349306-99349087 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 257-489 |
| Cow position: | chr1:78289610-78289841 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 94 |
| Conread position: | 283-490 |
| Cow position: | chr1:22864162-22863957 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 126, 59 |
| Conread position: | 288-498 |
| Cow position: | chr1:82407579-82407374 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 63 |
Show alignments to all cow chromosomes.