Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-247
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-488
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-489
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 45
               

               Conread position:
               3-489
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 66
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 161
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 70
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 44
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 77
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 52
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 8
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 219
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 251
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 352
               

               Conread position:
               12-487
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 62
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 65
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 62
               

               Conread position:
               15-466
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 49
               

               Conread position:
               16-489
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 65
               

               Conread position:
               39-265
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               46-348
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               50-489
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 14
               

               Conread position:
               60-275
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               22, 202
               

               Conread position:
               60-363
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               22, 167
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 213
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 283
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 201
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 131
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 202
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 224
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 140
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 157
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               61-490
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 213
               

               Conread position:
               81-466
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 94
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 9
               

               Conread position:
               81-498
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               88-490
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 16
               

               Conread position:
               95-490
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               99-490
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               266
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               103-464
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               104-286
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               92, 103
               

               Conread position:
               104-440
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               305, 21
               

               Conread position:
               105-490
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               170, 241
               

               Conread position:
               105-490
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 118
               

               Conread position:
               106-319
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               106-396
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               106-443
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               106-488
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               29, 161
               

               Conread position:
               114-307
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               129-476
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 136
               

               Conread position:
               134-488
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 154
               

               Conread position:
               134-490
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 129
               

               Conread position:
               136-368
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               145-490
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               152-306
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               152-440
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               153-490
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 58
               

               Conread position:
               155-466
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 117
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 182
               

               Conread position:
               156-447
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               253, 84
               

               Conread position:
               160-435
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               76, 36
               

               Conread position:
               174-466
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               235, 64
               

               Conread position:
               175-489
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               233, 165
               

               Conread position:
               231-439
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               178, 34
               

               Conread position:
               240-407
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               97, 0
               
Show alignments to all cow chromosomes.