Cow genome map
| Conread name: | rspc012_d20.y1 |
| Conread position: | 3-206 |
| Cow position: | chr12:22121160-22121355 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 121 |
| Conread position: | 3-447 |
| Cow position: | chr12:42860378-42859948 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 46 |
| Conread position: | 3-485 |
| Cow position: | chr12:2281973-2282451 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 102 |
| Conread position: | 3-488 |
| Cow position: | chr12:6407205-6406740 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 71 |
| Conread position: | 3-490 |
| Cow position: | chr12:11097678-11098151 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 71 |
| Conread position: | 3-490 |
| Cow position: | chr12:27933505-27933036 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 71 |
| Conread position: | 4-490 |
| Cow position: | chr12:8678680-8678213 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 45 |
| Conread position: | 4-490 |
| Cow position: | chr12:22206302-22205837 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 67 |
| Conread position: | 12-488 |
| Cow position: | chr12:25101618-25101154 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 62 |
| Conread position: | 12-490 |
| Cow position: | chr12:20998682-20998212 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 59 |
| Conread position: | 15-490 |
| Cow position: | chr12:21197275-21197736 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 42 |
| Conread position: | 50-462 |
| Cow position: | chr12:15951773-15951380 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 50-488 |
| Cow position: | chr12:1401968-1402398 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 52-440 |
| Cow position: | chr12:1137067-1137446 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 51 |
| Conread position: | 60-488 |
| Cow position: | chr12:21255167-21254748 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 133 |
| Conread position: | 60-490 |
| Cow position: | chr12:3360395-3360813 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 224 |
| Conread position: | 60-490 |
| Cow position: | chr12:21426187-21426603 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 60-490 |
| Cow position: | chr12:26141295-26141723 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 168 |
| Conread position: | 60-490 |
| Cow position: | chr12:32653029-32653454 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 200 |
| Conread position: | 60-490 |
| Cow position: | chr12:37558041-37558464 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 213 |
| Conread position: | 60-490 |
| Cow position: | chr12:43031892-43031474 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 60-495 |
| Cow position: | chr12:21207179-21207609 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 201 |
| Conread position: | 92-377 |
| Cow position: | chr12:26947754-26947460 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 107-439 |
| Cow position: | chr12:2840055-2839737 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 114-443 |
| Cow position: | chr12:1868005-1868328 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 161, 56 |
| Conread position: | 121-490 |
| Cow position: | chr12:22026303-22026661 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 115, 39 |
| Conread position: | 134-462 |
| Cow position: | chr12:22332176-22332503 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 91 |
| Conread position: | 136-440 |
| Cow position: | chr12:21941338-21941635 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 132 |
| Conread position: | 145-488 |
| Cow position: | chr12:45261171-45261522 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 145-490 |
| Cow position: | chr12:8310754-8311095 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 10 |
| Conread position: | 147-490 |
| Cow position: | chr12:28766441-28766111 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 261, 24 |
| Conread position: | 152-490 |
| Cow position: | chr12:2373-2708 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 120 |
| Conread position: | 155-447 |
| Cow position: | chr12:21901531-21901813 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 126 |
| Conread position: | 165-488 |
| Cow position: | chr12:14663022-14662704 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 102 |
| Conread position: | 165-489 |
| Cow position: | chr12:48404638-48404953 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 103 |
| Conread position: | 204-385 |
| Cow position: | chr12:42420783-42420606 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 283-447 |
| Cow position: | chr12:601346-601184 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 125, 64 |
Show alignments to all cow chromosomes.