Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-417
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               292
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               81, 269
               

               Conread position:
               3-488
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 66
               

               Conread position:
               3-489
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               403, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 70
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 123
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 126
               

               Conread position:
               4-488
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 70
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 268
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 158
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 177
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 47
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 274
               

               Conread position:
               15-490
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               16-270
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               16-432
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 72
               

               Conread position:
               50-407
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               50-488
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 14
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               60-296
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 215
               

               Conread position:
               60-311
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               60-364
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 168
               

               Conread position:
               60-456
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               22, 280
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 283
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 200
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 207
               

               Conread position:
               62-458
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 121
               

               Conread position:
               68-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 75
               

               Conread position:
               74-443
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               182, 6
               

               Conread position:
               80-489
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 119
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 131
               

               Conread position:
               94-490
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               95-424
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               170, 19
               

               Conread position:
               106-490
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               365, 162
               

               Conread position:
               115-488
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               129-320
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               134-464
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 144
               

               Conread position:
               134-490
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 117
               

               Conread position:
               138-328
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               139-490
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 127
               

               Conread position:
               145-463
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               145-466
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 84
               

               Conread position:
               147-490
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 118
               

               Conread position:
               149-490
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               155-487
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 189
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 109
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 190
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 31
               

               Conread position:
               172-466
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 100
               

               Conread position:
               174-490
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 109
               
Show alignments to all cow chromosomes.