Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               2-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               406, 47
               

               Conread position:
               3-348
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 108
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 127
               

               Conread position:
               3-457
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 199
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 75
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 39
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 71
               

               Conread position:
               4-348
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               80, 285
               

               Conread position:
               4-466
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 52
               

               Conread position:
               4-489
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 70
               

               Conread position:
               7-457
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 62
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               399, 67
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               401, 67
               

               Conread position:
               8-381
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 5
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               335
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               72, 280
               

               Conread position:
               14-490
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               394, 66
               

               Conread position:
               15-365
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               74, 149
               

               Conread position:
               15-464
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 131
               

               Conread position:
               25-488
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 242
               

               Conread position:
               34-466
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 95
               

               Conread position:
               38-466
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               38-466
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               45-490
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 172
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 14
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 216
               

               Conread position:
               60-296
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 213
               

               Conread position:
               60-335
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 196
               

               Conread position:
               60-489
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               349, 81
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               60-491
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               68-488
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 21
               

               Conread position:
               74-490
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 189
               

               Conread position:
               81-447
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 120
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 256
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               29, 135
               

               Conread position:
               92-488
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               271
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               117, 217
               

               Conread position:
               94-466
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               94-488
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               95-487
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               99-437
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               135, 10
               

               Conread position:
               104-348
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               104-443
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               161, 54
               

               Conread position:
               104-445
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 245
               

               Conread position:
               105-423
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               106-482
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               159, 201
               

               Conread position:
               115-481
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               116-326
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 172
               

               Conread position:
               121-409
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               125-369
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               127-424
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               127-490
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               129-375
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               129-488
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               132-490
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 214
               

               Conread position:
               133-447
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               275, 146
               

               Conread position:
               145-490
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 209
               

               Conread position:
               147-440
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               147-490
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               150-490
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 100
               

               Conread position:
               152-365
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               152-489
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 96
               

               Conread position:
               155-408
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 72
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 108
               

               Conread position:
               159-462
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 192
               

               Conread position:
               160-490
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 22
               

               Conread position:
               173-373
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               176-490
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 46
               

               Conread position:
               177-418
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               231, 88
               

               Conread position:
               211-490
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 71
               

               Conread position:
               231-461
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               179, 37
               

               Conread position:
               259-490
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               13, 84
               

               Conread position:
               293-490
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               116, 54
               
Show alignments to all cow chromosomes.