Cow genome map

Conread name: rspc012_d20.y1

Conread position: 2-490
Cow position:
Alignm length: 493
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 10

Conread position: 3-266
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 3-314
Cow position:
Alignm length: 312
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 3-380
Cow position:
Alignm length: 389
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 53

Conread position: 3-407
Cow position:
Alignm length: 408
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 126

Conread position: 3-407
Cow position:
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 130

Conread position: 3-409
Cow position:
Alignm length: 413
Alignm identity: 270
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 41, 66

Conread position: 3-424
Cow position:
Alignm length: 425
Alignm identity: 283
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 78, 54

Conread position: 3-436
Cow position:
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 65

Conread position: 3-440
Cow position:
Alignm length: 448
Alignm identity: 308
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 82, 9

Conread position: 3-465
Cow position:
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 71

Conread position: 3-466
Cow position:
Alignm length: 469
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 123

Conread position: 3-476
Cow position:
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 46

Conread position: 3-486
Cow position:
Alignm length: 486
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 89

Conread position: 3-487
Cow position:
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 56

Conread position: 3-488
Cow position:
Alignm length: 487
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-488
Cow position:
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 28

Conread position: 3-489
Cow position:
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 49

Conread position: 3-489
Cow position:
Alignm length: 488
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 71

Conread position: 3-490
Cow position:
Alignm length: 492
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 126

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 72

Conread position: 3-490
Cow position:
Alignm length: 488
Alignm identity: 323
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 46

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 30

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 74

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 26

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 46

Conread position: 3-490
Cow position:
Alignm length: 491
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 102

Conread position: 3-494
Cow position:
Alignm length: 494
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 53

Conread position: 4-478
Cow position:
Alignm length: 484
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 62

Conread position: 4-488
Cow position:
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 52

Conread position: 4-490
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 70

Conread position: 7-490
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 67

Conread position: 15-466
Cow position:
Alignm length: 468
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 123

Conread position: 15-488
Cow position:
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 70

Conread position: 15-489
Cow position:
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 15-490
Cow position:
Alignm length: 480
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 191

Conread position: 15-490
Cow position:
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 41

Conread position: 16-401
Cow position:
Alignm length: 392
Alignm identity: 261
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 65, 30

Conread position: 16-490
Cow position:
Alignm length: 478
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 76

Conread position: 16-490
Cow position:
Alignm length: 479
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 58

Conread position: 16-490
Cow position:
Alignm length: 487
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 16-494
Cow position:
Alignm length: 480
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 26

Conread position: 24-448
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 81

Conread position: 25-488
Cow position:
Alignm length: 475
Alignm identity: 313
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 22

Conread position: 36-348
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 63

Conread position: 36-490
Cow position:
Alignm length: 464
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 20

Conread position: 37-438
Cow position:
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 37-462
Cow position:
Alignm length: 429
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 67

Conread position: 38-476
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 38-488
Cow position:
Alignm length: 452
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 8

Conread position: 60-327
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 66

Conread position: 60-360
Cow position:
Alignm length: 303
Alignm identity: 183
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 22, 49

Conread position: 60-458
Cow position:
Alignm length: 401
Alignm identity: 270
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 190

Conread position: 60-466
Cow position:
Alignm length: 410
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 201

Conread position: 60-489
Cow position:
Alignm length: 436
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 134

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 152

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 140

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 285

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 176

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 59

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 168

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 196

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 152

Conread position: 60-490
Cow position:
Alignm length: 435
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 286

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 224

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 129

Conread position: 60-490
Cow position:
Alignm length: 438
Alignm identity: 294
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 190

Conread position: 60-490
Cow position:
Alignm length: 435
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 203

Conread position: 60-490
Cow position:
Alignm length: 438
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 289

Conread position: 60-491
Cow position:
Alignm length: 435
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 168

Conread position: 61-489
Cow position:
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 112

Conread position: 68-488
Cow position:
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 64

Conread position: 71-490
Cow position:
Alignm length: 431
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 22

Conread position: 74-319
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 6

Conread position: 79-490
Cow position:
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 186

Conread position: 81-487
Cow position:
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 17

Conread position: 84-466
Cow position:
Alignm length: 393
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 196

Conread position: 84-487
Cow position:
Alignm length: 405
Alignm identity: 248
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 91, 182

Conread position: 87-490
Cow position:
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 92-418
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 175

Conread position: 95-443
Cow position:
Alignm length: 363
Alignm identity: 232
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 158, 19

Conread position: 98-490
Cow position:
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 45

Conread position: 104-316
Cow position:
Alignm length: 213
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 104-439
Cow position:
Alignm length: 358
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 154

Conread position: 104-490
Cow position:
Alignm length: 390
Alignm identity: 265
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 28

Conread position: 105-419
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 107-297
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 167, 88

Conread position: 107-490
Cow position:
Alignm length: 391
Alignm identity: 260
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 65, 139

Conread position: 112-494
Cow position:
Alignm length: 392
Alignm identity: 267
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 107, 129

Conread position: 114-490
Cow position:
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 116-490
Cow position:
Alignm length: 376
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 295, 144

Conread position: 122-490
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 121

Conread position: 122-490
Cow position:
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 225

Conread position: 122-494
Cow position:
Alignm length: 382
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 54

Conread position: 126-490
Cow position:
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 138

Conread position: 129-490
Cow position:
Alignm length: 367
Alignm identity: 243
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 161

Conread position: 133-408
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 187, 59

Conread position: 133-466
Cow position:
Alignm length: 336
Alignm identity: 232
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 277, 105

Conread position: 134-443
Cow position:
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 110

Conread position: 136-497
Cow position:
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 273, 37

Conread position: 137-466
Cow position:
Alignm length: 346
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 130, 15

Conread position: 141-490
Cow position:
Alignm length: 351
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 131

Conread position: 145-447
Cow position:
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 129

Conread position: 145-466
Cow position:
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 13

Conread position: 150-490
Cow position:
Alignm length: 355
Alignm identity: 244
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 86, 205

Conread position: 152-443
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 250, 76

Conread position: 152-490
Cow position:
Alignm length: 340
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 131

Conread position: 153-494
Cow position:
Alignm length: 344
Alignm identity: 226
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 131

Conread position: 154-495
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 261, 42

Conread position: 155-418
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 254, 132

Conread position: 155-490
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 141, 31

Conread position: 155-490
Cow position:
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 186

Conread position: 155-490
Cow position:
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 129

Conread position: 159-440
Cow position:
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 113

Conread position: 159-494
Cow position:
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 121

Conread position: 165-335
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 165-490
Cow position:
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 34

Conread position: 172-489
Cow position:
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 93

Conread position: 176-489
Cow position:
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 92

Conread position: 186-424
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 200, 102

Conread position: 194-440
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 57, 62

Conread position: 206-490
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 115

Conread position: 273-466
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 136, 74

Conread position: 303-413
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 47

Show alignments to all cow chromosomes.