Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               3-335
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-456
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 108
               

               Conread position:
               3-457
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 214
               

               Conread position:
               3-467
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 64
               

               Conread position:
               3-476
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 90
               

               Conread position:
               3-482
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-488
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 66
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 65
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               406, 79
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               4-298
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               78, 108
               

               Conread position:
               4-466
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 78
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 263
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 86
               

               Conread position:
               10-440
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               10-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 209
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 278
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 62
               

               Conread position:
               15-490
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 114
               

               Conread position:
               16-462
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 86
               

               Conread position:
               16-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 271
               

               Conread position:
               16-490
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               33-490
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 13
               

               Conread position:
               46-490
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               362, 18
               

               Conread position:
               50-466
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 14
               

               Conread position:
               50-466
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               294
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               50-488
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               60-439
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               22, 201
               

               Conread position:
               60-487
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 146
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 172
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 224
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               60-491
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 126
               

               Conread position:
               68-466
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               270
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               340, 13
               

               Conread position:
               70-490
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 77
               

               Conread position:
               70-490
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               75-489
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 192
               

               Conread position:
               81-236
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               81-486
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 55
               

               Conread position:
               81-489
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 51
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 126
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               84-490
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               324, 31
               

               Conread position:
               91-489
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 129
               

               Conread position:
               96-489
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 183
               

               Conread position:
               98-320
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               102-321
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               163, 178
               

               Conread position:
               104-418
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               68, 163
               

               Conread position:
               104-464
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               56, 137
               

               Conread position:
               105-276
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               160, 110
               

               Conread position:
               105-490
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               115-478
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               293, 17
               

               Conread position:
               116-382
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 123
               

               Conread position:
               129-478
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               136-481
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               141, 43
               

               Conread position:
               136-488
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               277, 74
               

               Conread position:
               137-443
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               49, 40
               

               Conread position:
               145-490
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               106, 146
               

               Conread position:
               145-490
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 127
               

               Conread position:
               145-490
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 109
               

               Conread position:
               147-435
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               114, 78
               

               Conread position:
               147-447
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 117
               

               Conread position:
               150-490
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 20
               

               Conread position:
               152-321
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               155-462
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 110
               

               Conread position:
               155-488
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 117
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 117
               

               Conread position:
               158-494
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               251, 52
               

               Conread position:
               162-488
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 189
               

               Conread position:
               169-490
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 96
               

               Conread position:
               170-328
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               170-490
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 95
               

               Conread position:
               172-490
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 41
               

               Conread position:
               248-443
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               254-490
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               154, 24
               

               Conread position:
               298-464
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 38
               
Show alignments to all cow chromosomes.