Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-385
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               368, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 45
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 19
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 71
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               80, 103
               

               Conread position:
               7-489
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 234
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               402, 35
               

               Conread position:
               12-335
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               15-487
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 111
               

               Conread position:
               18-489
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               35, 51
               

               Conread position:
               28-490
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               37-373
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               38-466
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               39-490
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               369, 25
               

               Conread position:
               49-489
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 231
               

               Conread position:
               50-488
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 94
               

               Conread position:
               60-466
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 224
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 221
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 213
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 144
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 214
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               21, 140
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 167
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 167
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               298
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               22, 295
               

               Conread position:
               61-346
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               21, 200
               

               Conread position:
               62-489
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 200
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 78
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 44
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               82-490
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               85-440
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               91-466
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 189
               

               Conread position:
               102-326
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 154
               

               Conread position:
               105-275
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               146, 152
               

               Conread position:
               105-464
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               139, 38
               

               Conread position:
               114-488
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 151
               

               Conread position:
               118-488
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 185
               

               Conread position:
               121-439
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 238
               

               Conread position:
               127-443
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 163
               

               Conread position:
               127-490
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               134-385
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               215, 0
               

               Conread position:
               134-440
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 97
               

               Conread position:
               137-326
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               137-490
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 124
               

               Conread position:
               139-408
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               144-490
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 110
               

               Conread position:
               145-488
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               146-368
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               147-488
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               155-466
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               198, 44
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 63
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 126
               

               Conread position:
               168-490
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               241, 37
               

               Conread position:
               174-312
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               193-393
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               136, 155
               

               Conread position:
               223-490
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               226-490
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               185, 56
               

               Conread position:
               278-462
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               287-490
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               120, 20
               
Show alignments to all cow chromosomes.