Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 43
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 65
               

               Conread position:
               3-348
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 78
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 66
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-494
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               74, 268
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 70
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 70
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 75
               

               Conread position:
               7-440
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               75, 292
               

               Conread position:
               12-473
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 125
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               336
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               70, 263
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 59
               

               Conread position:
               16-490
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               315
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               67, 87
               

               Conread position:
               25-490
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 194
               

               Conread position:
               36-464
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 31
               

               Conread position:
               44-486
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               307
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               60-466
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 196
               

               Conread position:
               60-486
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               56, 29
               

               Conread position:
               60-489
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 278
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 203
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 174
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               62-490
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               104-486
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 124
               

               Conread position:
               104-490
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 55
               

               Conread position:
               104-490
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 89
               

               Conread position:
               105-488
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               10, 248
               

               Conread position:
               106-490
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               117-490
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               129-400
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               132-400
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               214, 101
               

               Conread position:
               133-497
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               204, 104
               

               Conread position:
               134-490
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               275, 65
               

               Conread position:
               136-499
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               77, 91
               

               Conread position:
               139-466
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               179, 53
               

               Conread position:
               140-490
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               145-466
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               145-486
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               146-490
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 9
               

               Conread position:
               150-490
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 5
               

               Conread position:
               152-331
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               155-386
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 78
               

               Conread position:
               155-440
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               205, 45
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 150
               

               Conread position:
               165-444
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 99
               

               Conread position:
               165-489
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 100
               

               Conread position:
               216-440
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               193, 11
               

               Conread position:
               242-488
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               169, 27
               

               Conread position:
               300-487
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 52
               
Show alignments to all cow chromosomes.