Cow genome map

Conread name: rspc012_d20.y1

Conread position: 2-490
Cow position:
Alignm length: 491
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 181

Conread position: 3-437
Cow position:
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 63

Conread position: 3-447
Cow position:
Alignm length: 448
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 123

Conread position: 3-447
Cow position:
Alignm length: 450
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 11

Conread position: 3-462
Cow position:
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 262

Conread position: 3-464
Cow position:
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 52

Conread position: 3-466
Cow position:
Alignm length: 468
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 91

Conread position: 3-487
Cow position:
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 71

Conread position: 3-487
Cow position:
Alignm length: 495
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 271

Conread position: 3-488
Cow position:
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 71

Conread position: 3-489
Cow position:
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-489
Cow position:
Alignm length: 502
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 182

Conread position: 3-490
Cow position:
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 96

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 501
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 46

Conread position: 3-490
Cow position:
Alignm length: 491
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 11

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 509
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 362

Conread position: 3-490
Cow position:
Alignm length: 499
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 90

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 46

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 130

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 122

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 69

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-491
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 4-314
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 121

Conread position: 4-447
Cow position:
Alignm length: 446
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 123

Conread position: 4-490
Cow position:
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 27

Conread position: 7-490
Cow position:
Alignm length: 498
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 163

Conread position: 7-495
Cow position:
Alignm length: 490
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 71

Conread position: 7-495
Cow position:
Alignm length: 510
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 285

Conread position: 11-489
Cow position:
Alignm length: 483
Alignm identity: 296
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 58, 34

Conread position: 12-335
Cow position:
Alignm length: 324
Alignm identity: 223
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 12-436
Cow position:
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 71

Conread position: 12-489
Cow position:
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 219

Conread position: 13-490
Cow position:
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 70

Conread position: 15-299
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 15-306
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 37, 54

Conread position: 15-394
Cow position:
Alignm length: 384
Alignm identity: 258
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 44

Conread position: 15-464
Cow position:
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 47

Conread position: 15-466
Cow position:
Alignm length: 456
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 99

Conread position: 34-277
Cow position:
Alignm length: 246
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 35

Conread position: 34-490
Cow position:
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 95

Conread position: 38-490
Cow position:
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 12

Conread position: 50-489
Cow position:
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 14

Conread position: 50-490
Cow position:
Alignm length: 444
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 14

Conread position: 55-488
Cow position:
Alignm length: 436
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 148

Conread position: 56-490
Cow position:
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 19

Conread position: 60-466
Cow position:
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 60-487
Cow position:
Alignm length: 438
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 201

Conread position: 60-490
Cow position:
Alignm length: 440
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 213

Conread position: 60-490
Cow position:
Alignm length: 437
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 80

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 86

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 118

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 202

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 203

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 168

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 286
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 29, 201

Conread position: 74-484
Cow position:
Alignm length: 425
Alignm identity: 279
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 10, 57

Conread position: 80-466
Cow position:
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 33

Conread position: 80-488
Cow position:
Alignm length: 411
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 58

Conread position: 80-490
Cow position:
Alignm length: 415
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 147

Conread position: 80-490
Cow position:
Alignm length: 412
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 192

Conread position: 81-489
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 184

Conread position: 81-490
Cow position:
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 62

Conread position: 81-496
Cow position:
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 126

Conread position: 84-371
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 0

Conread position: 92-466
Cow position:
Alignm length: 381
Alignm identity: 262
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 127, 8

Conread position: 100-435
Cow position:
Alignm length: 337
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 309, 179

Conread position: 104-464
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 279, 124

Conread position: 104-466
Cow position:
Alignm length: 368
Alignm identity: 245
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 115, 122

Conread position: 104-488
Cow position:
Alignm length: 387
Alignm identity: 250
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 274, 92

Conread position: 104-489
Cow position:
Alignm length: 389
Alignm identity: 253
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 26

Conread position: 105-490
Cow position:
Alignm length: 389
Alignm identity: 251
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 32

Conread position: 105-490
Cow position:
Alignm length: 389
Alignm identity: 265
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 32, 26

Conread position: 105-490
Cow position:
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 162

Conread position: 105-490
Cow position:
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 13

Conread position: 106-487
Cow position:
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 20

Conread position: 114-272
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 114-404
Cow position:
Alignm length: 293
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 5

Conread position: 114-466
Cow position:
Alignm length: 357
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 114-490
Cow position:
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 56

Conread position: 122-368
Cow position:
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 167

Conread position: 122-490
Cow position:
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 143

Conread position: 122-490
Cow position:
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 142

Conread position: 129-443
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 138, 57

Conread position: 132-490
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 74

Conread position: 134-490
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 275, 37

Conread position: 134-490
Cow position:
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 28

Conread position: 135-466
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 9

Conread position: 138-402
Cow position:
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 39

Conread position: 138-422
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 7

Conread position: 138-437
Cow position:
Alignm length: 305
Alignm identity: 201
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 113, 75

Conread position: 139-490
Cow position:
Alignm length: 353
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 16

Conread position: 142-488
Cow position:
Alignm length: 351
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 69

Conread position: 142-490
Cow position:
Alignm length: 350
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 130

Conread position: 145-459
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 93

Conread position: 146-418
Cow position:
Alignm length: 275
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 69

Conread position: 147-490
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 118

Conread position: 147-491
Cow position:
Alignm length: 347
Alignm identity: 239
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 17, 56

Conread position: 150-455
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 259, 43

Conread position: 152-490
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 120

Conread position: 155-435
Cow position:
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 123

Conread position: 155-467
Cow position:
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 117

Conread position: 155-490
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 136

Conread position: 155-490
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 112, 159

Conread position: 156-488
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 109

Conread position: 159-408
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 130, 0

Conread position: 160-489
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 123

Conread position: 162-466
Cow position:
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 28

Conread position: 165-490
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 50

Conread position: 169-447
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 189

Conread position: 172-334
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 176-490
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 232, 105

Conread position: 177-490
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 232, 27

Conread position: 288-490
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 63

Conread position: 298-466
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 8

Conread position: 349-488
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.