Cow genome map
| Conread name: | rspc012_d20.y1 |
| Conread position: | 2-490 |
| Cow position: | chr20:27868690-27869162 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 10 |
| Conread position: | 3-309 |
| Cow position: | chr20:35118744-35119033 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 3-337 |
| Cow position: | chr20:13681587-13681277 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 3-435 |
| Cow position: | chr20:11276791-11276386 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 126 |
| Conread position: | 3-464 |
| Cow position: | chr20:3252638-3252194 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 79 |
| Conread position: | 3-489 |
| Cow position: | chr20:23798369-23798847 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 52 |
| Conread position: | 3-490 |
| Cow position: | chr20:5534440-5534904 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 71 |
| Conread position: | 3-490 |
| Cow position: | chr20:7116978-7116504 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 63 |
| Conread position: | 3-490 |
| Cow position: | chr20:15064241-15064734 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 352 |
| Conread position: | 3-490 |
| Cow position: | chr20:21913831-21914291 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 45 |
| Conread position: | 3-490 |
| Cow position: | chr20:23470168-23469694 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 71 |
| Conread position: | 4-490 |
| Cow position: | chr20:10103058-10102584 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 4-490 |
| Cow position: | chr20:21393061-21393528 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 8 |
| Conread position: | 7-490 |
| Cow position: | chr20:18316091-18315619 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 94 |
| Conread position: | 12-490 |
| Cow position: | chr20:30683840-30684300 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 65 |
| Conread position: | 14-318 |
| Cow position: | chr20:15291551-15291843 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 15-490 |
| Cow position: | chr20:28160271-28160745 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 36-490 |
| Cow position: | chr20:20755917-20755458 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 38-490 |
| Cow position: | chr20:12439243-12438796 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 40-385 |
| Cow position: | chr20:8004993-8004653 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 24 |
| Conread position: | 60-364 |
| Cow position: | chr20:31123943-31124244 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 22, 168 |
| Conread position: | 60-490 |
| Cow position: | chr20:822295-822732 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 60-490 |
| Cow position: | chr20:19437502-19437923 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 68-490 |
| Cow position: | chr20:2791801-2791381 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 243, 46 |
| Conread position: | 81-348 |
| Cow position: | chr20:29947745-29948011 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 81-425 |
| Cow position: | chr20:2676679-2677016 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 81-490 |
| Cow position: | chr20:25851426-25851025 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 62 |
| Conread position: | 84-490 |
| Cow position: | chr20:13762473-13762867 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 7 |
| Conread position: | 94-464 |
| Cow position: | chr20:5483767-5484131 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 98-488 |
| Cow position: | chr20:8994240-8993855 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 126, 112 |
| Conread position: | 104-466 |
| Cow position: | chr20:20905599-20905246 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 276, 182 |
| Conread position: | 104-490 |
| Cow position: | chr20:22206118-22206513 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 33 |
| Conread position: | 124-436 |
| Cow position: | chr20:3032534-3032840 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 136-443 |
| Cow position: | chr20:24614165-24614465 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 16 |
| Conread position: | 145-424 |
| Cow position: | chr20:8371264-8370995 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 49 |
| Conread position: | 147-490 |
| Cow position: | chr20:10846450-10846113 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 59 |
| Conread position: | 148-490 |
| Cow position: | chr20:5561089-5560750 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 79 |
| Conread position: | 152-489 |
| Cow position: | chr20:4800014-4799687 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 77 |
| Conread position: | 152-490 |
| Cow position: | chr20:15098238-15097913 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 21, 128 |
| Conread position: | 156-490 |
| Cow position: | chr20:8313796-8313471 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 36 |
| Conread position: | 161-490 |
| Cow position: | chr20:3270362-3270669 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 247, 111 |
| Conread position: | 164-490 |
| Cow position: | chr20:28593393-28593711 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 35 |
| Conread position: | 165-490 |
| Cow position: | chr20:28565957-28565631 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 100 |
| Conread position: | 175-487 |
| Cow position: | chr20:22718026-22717733 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 251-490 |
| Cow position: | chr20:19192399-19192163 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 158, 32 |
| Conread position: | 255-490 |
| Cow position: | chr20:35119058-35119289 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 153, 23 |
Show alignments to all cow chromosomes.