Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               2-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               406, 26
               

               Conread position:
               3-464
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 46
               

               Conread position:
               3-466
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               388, 79
               

               Conread position:
               3-488
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 92
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 223
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-494
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 71
               

               Conread position:
               4-252
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 113
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 300
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 283
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               407, 76
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               401, 42
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               394, 70
               

               Conread position:
               12-440
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 60
               

               Conread position:
               12-487
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 62
               

               Conread position:
               15-293
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               74, 54
               

               Conread position:
               15-335
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               33-490
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               36-466
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               50-466
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               53-489
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 227
               

               Conread position:
               55-490
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 198
               

               Conread position:
               60-296
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 213
               

               Conread position:
               60-407
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 196
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 78
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 140
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 140
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 220
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               60-524
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 201
               

               Conread position:
               60-543
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 220
               

               Conread position:
               61-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 205
               

               Conread position:
               62-320
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 145
               

               Conread position:
               64-490
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 164
               

               Conread position:
               68-490
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 197
               

               Conread position:
               80-490
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               6, 201
               

               Conread position:
               81-365
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               81-450
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 8
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 184
               

               Conread position:
               82-466
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               104-422
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 119
               

               Conread position:
               104-488
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 181
               

               Conread position:
               114-488
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               114-488
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 56
               

               Conread position:
               129-490
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               279, 63
               

               Conread position:
               134-432
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 138
               

               Conread position:
               134-466
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 137
               

               Conread position:
               134-490
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 154
               

               Conread position:
               137-309
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               139-490
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               146-424
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               147-308
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 50
               

               Conread position:
               152-490
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 121
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 123
               

               Conread position:
               155-491
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 74
               

               Conread position:
               160-473
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 80
               

               Conread position:
               162-490
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               105, 37
               

               Conread position:
               164-490
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 114
               

               Conread position:
               176-490
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 116
               

               Conread position:
               189-490
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 89
               

               Conread position:
               191-489
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               269-490
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               140, 68
               

               Conread position:
               271-447
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               140, 25
               

               Conread position:
               290-490
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               81, 33
               
Show alignments to all cow chromosomes.