Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-311
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               46, 53
               

               Conread position:
               3-466
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 239
               

               Conread position:
               3-466
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 9
               

               Conread position:
               3-466
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 54
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 64
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 130
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 218
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 72
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               406, 70
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 123
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 120
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               407, 79
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 116
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 277
               

               Conread position:
               7-466
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               402, 42
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 293
               

               Conread position:
               12-263
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               12-436
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               292
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               23, 119
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               397, 72
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 253
               

               Conread position:
               15-279
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               66, 118
               

               Conread position:
               15-488
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 143
               

               Conread position:
               15-490
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 114
               

               Conread position:
               34-351
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               34-489
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               47-490
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 133
               

               Conread position:
               50-231
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               52-464
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 16
               

               Conread position:
               60-415
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 214
               

               Conread position:
               60-466
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 216
               

               Conread position:
               60-466
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 192
               

               Conread position:
               60-489
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 202
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 225
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 213
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 203
               

               Conread position:
               62-489
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 199
               

               Conread position:
               62-490
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 199
               

               Conread position:
               67-490
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 206
               

               Conread position:
               68-490
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               303, 16
               

               Conread position:
               81-369
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               84-489
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 52
               

               Conread position:
               84-490
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 181
               

               Conread position:
               91-458
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               99-277
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               105-424
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               303, 118
               

               Conread position:
               105-490
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               107-487
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               259
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               114-491
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 107
               

               Conread position:
               121-457
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 144
               

               Conread position:
               132-403
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               141, 215
               

               Conread position:
               132-418
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 215
               

               Conread position:
               134-490
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               160, 129
               

               Conread position:
               140-478
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               114, 18
               

               Conread position:
               152-489
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               258, 76
               

               Conread position:
               153-493
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               179, 24
               

               Conread position:
               155-416
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 182
               

               Conread position:
               155-488
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 124
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 117
               

               Conread position:
               160-490
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 104
               

               Conread position:
               161-390
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               213, 104
               

               Conread position:
               162-464
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               105, 37
               

               Conread position:
               164-490
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 101
               

               Conread position:
               178-490
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 200
               

               Conread position:
               179-471
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 85
               

               Conread position:
               202-487
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               264-462
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               147, 7
               

               Conread position:
               351-488
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               359-490
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               50, 0
               
Show alignments to all cow chromosomes.