Cow genome map

Conread name: rspc012_d20.y1

Conread position: 3-447
Cow position:
Alignm length: 447
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 71

Conread position: 3-447
Cow position:
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 263

Conread position: 3-488
Cow position:
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 107

Conread position: 3-488
Cow position:
Alignm length: 498
Alignm identity: 319
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 109, 71

Conread position: 3-488
Cow position:
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 46

Conread position: 3-490
Cow position:
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 46

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 9

Conread position: 3-490
Cow position:
Alignm length: 491
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 71

Conread position: 3-490
Cow position:
Alignm length: 491
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 4-314
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 72

Conread position: 4-490
Cow position:
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 52

Conread position: 12-490
Cow position:
Alignm length: 497
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 27

Conread position: 15-487
Cow position:
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 52

Conread position: 16-490
Cow position:
Alignm length: 479
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 77

Conread position: 34-490
Cow position:
Alignm length: 458
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 12

Conread position: 36-475
Cow position:
Alignm length: 442
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 10

Conread position: 50-489
Cow position:
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 14

Conread position: 50-490
Cow position:
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 55-490
Cow position:
Alignm length: 444
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 89

Conread position: 60-335
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 206

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 118

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 79

Conread position: 70-490
Cow position:
Alignm length: 426
Alignm identity: 289
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 11, 22

Conread position: 73-368
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 37

Conread position: 75-490
Cow position:
Alignm length: 417
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 66

Conread position: 80-488
Cow position:
Alignm length: 410
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 199

Conread position: 81-490
Cow position:
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 51

Conread position: 104-490
Cow position:
Alignm length: 392
Alignm identity: 269
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 89

Conread position: 105-324
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 105-488
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 265, 146

Conread position: 133-490
Cow position:
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 132

Conread position: 136-487
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 115, 122

Conread position: 137-465
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 15

Conread position: 137-485
Cow position:
Alignm length: 354
Alignm identity: 230
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 54

Conread position: 141-382
Cow position:
Alignm length: 247
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 211

Conread position: 145-466
Cow position:
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 10

Conread position: 145-490
Cow position:
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 13

Conread position: 150-450
Cow position:
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 103

Conread position: 155-466
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 117

Conread position: 155-490
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 131

Conread position: 155-490
Cow position:
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 192

Conread position: 160-440
Cow position:
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 85

Conread position: 165-443
Cow position:
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 107

Conread position: 165-490
Cow position:
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 118

Conread position: 171-490
Cow position:
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 94

Conread position: 182-490
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 31, 45

Conread position: 206-347
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 208-466
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 70

Conread position: 223-466
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 186, 44

Conread position: 243-490
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 166, 40

Conread position: 273-440
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 136, 77

Conread position: 298-490
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 110, 49

Conread position: 346-466
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.