Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-227
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-325
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 81
               

               Conread position:
               3-348
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 71
               

               Conread position:
               3-407
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 126
               

               Conread position:
               3-489
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 139
               

               Conread position:
               3-489
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 56
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               4-488
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 209
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 62
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 102
               

               Conread position:
               8-490
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 5
               

               Conread position:
               9-490
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               76, 13
               

               Conread position:
               14-490
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               15-488
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 28
               

               Conread position:
               16-313
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               16-462
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               50-320
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               54-463
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               55-490
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               60-335
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 162
               

               Conread position:
               60-408
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               60-457
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 109
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               226, 70
               

               Conread position:
               60-489
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 216
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 213
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 213
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 213
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               70-490
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 203
               

               Conread position:
               80-402
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               133, 184
               

               Conread position:
               81-489
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 31
               

               Conread position:
               97-441
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               104-417
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               288, 17
               

               Conread position:
               104-490
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 247
               

               Conread position:
               105-487
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               106-490
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               288, 116
               

               Conread position:
               107-326
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               109-443
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               109-490
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 34
               

               Conread position:
               122-441
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               287, 14
               

               Conread position:
               132-443
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               229, 101
               

               Conread position:
               133-490
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               275, 58
               

               Conread position:
               136-490
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 19
               

               Conread position:
               138-407
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               145-401
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               147-490
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               262, 114
               

               Conread position:
               155-324
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               155-382
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               155-447
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 117
               

               Conread position:
               157-490
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               165-488
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               241, 100
               

               Conread position:
               168-415
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               158, 97
               

               Conread position:
               175-490
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               223-425
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               186, 11
               

               Conread position:
               228-490
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               181, 55
               

               Conread position:
               228-490
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               181, 55
               

               Conread position:
               323-489
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               349-490
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 0
               
Show alignments to all cow chromosomes.