Cow genome map
| Conread name: | rspc012_d20.y1 |
| Conread position: | 2-490 |
| Cow position: | chr25:13780518-13780983 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 3-476 |
| Cow position: | chr25:18302254-18302730 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 3-490 |
| Cow position: | chr25:8674411-8674869 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 46 |
| Conread position: | 3-490 |
| Cow position: | chr25:18890532-18890061 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 46 |
| Conread position: | 3-490 |
| Cow position: | chr25:26278758-26279219 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 46 |
| Conread position: | 3-494 |
| Cow position: | chr25:18092494-18092976 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 4-487 |
| Cow position: | chr25:33991581-33991107 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 308 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 92, 130 |
| Conread position: | 4-490 |
| Cow position: | chr25:18276360-18275870 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 184 |
| Conread position: | 4-490 |
| Cow position: | chr25:22146978-22147448 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 71 |
| Conread position: | 7-486 |
| Cow position: | chr25:17561119-17560662 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 126 |
| Conread position: | 12-344 |
| Cow position: | chr25:34014854-34014536 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 15-490 |
| Cow position: | chr25:18172816-18173316 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 328 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 74, 118 |
| Conread position: | 16-439 |
| Cow position: | chr25:23346198-23345804 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 83, 58 |
| Conread position: | 25-490 |
| Cow position: | chr25:12760122-12759642 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 321 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 31-486 |
| Cow position: | chr25:17563406-17562971 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 45-490 |
| Cow position: | chr25:34347476-34347038 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 15 |
| Conread position: | 50-490 |
| Cow position: | chr25:25506168-25506604 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 60-488 |
| Cow position: | chr25:11933992-11933574 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 293 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 60-489 |
| Cow position: | chr25:26921757-26922181 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 280 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 32, 224 |
| Conread position: | 60-490 |
| Cow position: | chr25:17590017-17589595 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 224 |
| Conread position: | 60-490 |
| Cow position: | chr25:19916615-19917037 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 60-490 |
| Cow position: | chr25:20777372-20776944 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 278 |
| Conread position: | 60-490 |
| Cow position: | chr25:32579511-32579919 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 60-490 |
| Cow position: | chr25:35362893-35362469 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 200 |
| Conread position: | 93-490 |
| Cow position: | chr25:26866783-26867179 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 257 |
| Conread position: | 99-490 |
| Cow position: | chr25:19288780-19288401 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 53, 181 |
| Conread position: | 104-466 |
| Cow position: | chr25:18255783-18255433 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 83, 54 |
| Conread position: | 120-443 |
| Cow position: | chr25:18411694-18411380 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 179 |
| Conread position: | 136-373 |
| Cow position: | chr25:20493965-20494198 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 141-308 |
| Cow position: | chr25:32979150-32978984 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 151-487 |
| Cow position: | chr25:20629195-20629528 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 114 |
| Conread position: | 153-491 |
| Cow position: | chr25:21901702-21902021 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 114 |
| Conread position: | 155-490 |
| Cow position: | chr25:11375724-11375394 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 117 |
| Conread position: | 155-490 |
| Cow position: | chr25:14015799-14016124 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 117 |
| Conread position: | 155-490 |
| Cow position: | chr25:17469071-17468742 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 133 |
| Conread position: | 155-490 |
| Cow position: | chr25:18028006-18027672 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 125 |
| Conread position: | 159-490 |
| Cow position: | chr25:18060967-18060633 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 108, 58 |
| Conread position: | 160-427 |
| Cow position: | chr25:24171662-24171917 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 248, 91 |
| Conread position: | 174-394 |
| Cow position: | chr25:12943796-12943583 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 177-466 |
| Cow position: | chr25:34656801-34656515 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 95 |
| Conread position: | 272-490 |
| Cow position: | chr25:36240284-36240500 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 16, 79 |
Show alignments to all cow chromosomes.