Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               2-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               3-476
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-494
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 99
               

               Conread position:
               4-487
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               308
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               92, 130
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 184
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 71
               

               Conread position:
               7-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 126
               

               Conread position:
               12-344
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               15-490
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               328
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               74, 118
               

               Conread position:
               16-439
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               25-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               321
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               31-486
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               45-490
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               363, 15
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               293
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               60-489
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               280
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               32, 224
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 224
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 202
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 278
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 200
               

               Conread position:
               93-490
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 257
               

               Conread position:
               99-490
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               53, 181
               

               Conread position:
               104-466
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               83, 54
               

               Conread position:
               120-443
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 179
               

               Conread position:
               136-373
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               141-308
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               151-487
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 114
               

               Conread position:
               153-491
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               104, 114
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 117
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 117
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 133
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 125
               

               Conread position:
               159-490
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               108, 58
               

               Conread position:
               160-427
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               248, 91
               

               Conread position:
               174-394
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               177-466
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 95
               

               Conread position:
               272-490
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               16, 79
               
Show alignments to all cow chromosomes.