Cow genome map

Conread name: rspc012_d20.y1

Conread position: 1-488
Cow position:
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 66

Conread position: 3-293
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 261, 71

Conread position: 3-296
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 86, 33

Conread position: 3-308
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 3-314
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 121, 71

Conread position: 3-314
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 3-317
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 77, 276

Conread position: 3-336
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 125

Conread position: 3-448
Cow position:
Alignm length: 450
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 3-450
Cow position:
Alignm length: 449
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 3-464
Cow position:
Alignm length: 466
Alignm identity: 320
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 80, 19

Conread position: 3-466
Cow position:
Alignm length: 471
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 3-488
Cow position:
Alignm length: 488
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 71

Conread position: 3-488
Cow position:
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-489
Cow position:
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 28

Conread position: 3-490
Cow position:
Alignm length: 491
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 39

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 118

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 492
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 153

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 64

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 40

Conread position: 3-490
Cow position:
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 4-490
Cow position:
Alignm length: 507
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 70

Conread position: 12-490
Cow position:
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 62

Conread position: 12-490
Cow position:
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 62

Conread position: 12-490
Cow position:
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 61

Conread position: 15-314
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 74, 114

Conread position: 15-467
Cow position:
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 122

Conread position: 15-487
Cow position:
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 116

Conread position: 16-406
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 41

Conread position: 16-461
Cow position:
Alignm length: 449
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 31

Conread position: 34-490
Cow position:
Alignm length: 461
Alignm identity: 307
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 47, 57

Conread position: 38-490
Cow position:
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 8

Conread position: 50-309
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 50-348
Cow position:
Alignm length: 300
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 133

Conread position: 50-463
Cow position:
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 14

Conread position: 50-490
Cow position:
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 18

Conread position: 50-490
Cow position:
Alignm length: 442
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 14

Conread position: 60-328
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 213

Conread position: 60-466
Cow position:
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 60-489
Cow position:
Alignm length: 434
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 227

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 104

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 225

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 168

Conread position: 80-489
Cow position:
Alignm length: 411
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 9

Conread position: 81-490
Cow position:
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 256

Conread position: 90-490
Cow position:
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 175

Conread position: 95-482
Cow position:
Alignm length: 396
Alignm identity: 254
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 21, 10

Conread position: 104-418
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 168, 32

Conread position: 105-277
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 58

Conread position: 115-466
Cow position:
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 17

Conread position: 134-462
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 147

Conread position: 136-431
Cow position:
Alignm length: 297
Alignm identity: 194
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 272, 155

Conread position: 137-490
Cow position:
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 63

Conread position: 155-466
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 44

Conread position: 164-461
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 165-490
Cow position:
Alignm length: 338
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 102, 183

Conread position: 175-490
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 90

Conread position: 177-490
Cow position:
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 88

Conread position: 182-490
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 189, 79

Conread position: 206-440
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 203, 62

Conread position: 216-490
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 193, 45

Conread position: 232-467
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 179, 46

Conread position: 288-461
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 64

Conread position: 305-489
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 104, 42

Show alignments to all cow chromosomes.