Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-259
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               3-259
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               79, 12
               

               Conread position:
               3-395
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-487
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               382, 71
               

               Conread position:
               3-489
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               328
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               77, 125
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 61
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 139
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 69
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               368, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 77
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               382, 8
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 8
               

               Conread position:
               7-275
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 132
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 24
               

               Conread position:
               11-490
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 62
               

               Conread position:
               16-490
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               60-487
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 283
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 284
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 196
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 76
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 202
               

               Conread position:
               61-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 170
               

               Conread position:
               80-380
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               93, 148
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 184
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 184
               

               Conread position:
               84-490
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               91-250
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               110, 116
               

               Conread position:
               94-490
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 179
               

               Conread position:
               95-490
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 165
               

               Conread position:
               104-466
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               145, 37
               

               Conread position:
               104-487
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               194, 38
               

               Conread position:
               104-490
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 161
               

               Conread position:
               106-435
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               174, 257
               

               Conread position:
               115-440
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 138
               

               Conread position:
               128-443
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               28, 141
               

               Conread position:
               129-348
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               138-494
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               141-490
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               145-440
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 10
               

               Conread position:
               146-490
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 58
               

               Conread position:
               147-490
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 76
               

               Conread position:
               149-490
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               152-440
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 149
               

               Conread position:
               152-484
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               113, 147
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 117
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               254, 41
               

               Conread position:
               164-490
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               97, 115
               

               Conread position:
               264-466
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               264-488
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               146, 83
               

               Conread position:
               264-490
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               145, 73
               

               Conread position:
               270-490
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               139, 18
               
Show alignments to all cow chromosomes.