Cow genome map

Conread name: rspc012_d20.y1

Conread position: 3-288
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 3-299
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 86, 41

Conread position: 3-402
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 367, 74

Conread position: 3-411
Cow position:
Alignm length: 409
Alignm identity: 280
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 3-442
Cow position:
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 123

Conread position: 3-458
Cow position:
Alignm length: 458
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 115

Conread position: 3-462
Cow position:
Alignm length: 464
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 105

Conread position: 3-462
Cow position:
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 74

Conread position: 3-462
Cow position:
Alignm length: 468
Alignm identity: 301
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 96

Conread position: 3-478
Cow position:
Alignm length: 478
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 46

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 41

Conread position: 3-490
Cow position:
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 32

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 71

Conread position: 3-490
Cow position:
Alignm length: 491
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 263

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 71

Conread position: 3-494
Cow position:
Alignm length: 494
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 72

Conread position: 4-318
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 76, 215

Conread position: 7-447
Cow position:
Alignm length: 453
Alignm identity: 305
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 73

Conread position: 7-490
Cow position:
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 50

Conread position: 7-490
Cow position:
Alignm length: 507
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 287

Conread position: 7-490
Cow position:
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 258

Conread position: 11-435
Cow position:
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 28

Conread position: 12-208
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 12-443
Cow position:
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 18

Conread position: 12-464
Cow position:
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 259

Conread position: 12-490
Cow position:
Alignm length: 481
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 121

Conread position: 12-490
Cow position:
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 63

Conread position: 12-490
Cow position:
Alignm length: 486
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 37

Conread position: 12-490
Cow position:
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 63

Conread position: 15-277
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 54

Conread position: 15-490
Cow position:
Alignm length: 481
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 116

Conread position: 16-307
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 65, 28

Conread position: 16-455
Cow position:
Alignm length: 443
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 138

Conread position: 16-457
Cow position:
Alignm length: 448
Alignm identity: 289
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 326, 75

Conread position: 18-489
Cow position:
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 39-490
Cow position:
Alignm length: 453
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 21

Conread position: 40-490
Cow position:
Alignm length: 452
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 20

Conread position: 45-490
Cow position:
Alignm length: 447
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 15

Conread position: 50-490
Cow position:
Alignm length: 443
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 50-490
Cow position:
Alignm length: 442
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 14

Conread position: 50-490
Cow position:
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 50-490
Cow position:
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 14

Conread position: 55-490
Cow position:
Alignm length: 438
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 218

Conread position: 55-490
Cow position:
Alignm length: 438
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 59-490
Cow position:
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 10

Conread position: 60-299
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 69

Conread position: 60-335
Cow position:
Alignm length: 278
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 168

Conread position: 60-418
Cow position:
Alignm length: 362
Alignm identity: 250
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 156

Conread position: 60-436
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 203

Conread position: 60-488
Cow position:
Alignm length: 432
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 167

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 152

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 60-490
Cow position:
Alignm length: 435
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 84

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 202

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 224

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 6

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 60-490
Cow position:
Alignm length: 432
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 60-490
Cow position:
Alignm length: 443
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 189

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 278

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 43

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 201

Conread position: 60-490
Cow position:
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 221

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 202

Conread position: 61-490
Cow position:
Alignm length: 434
Alignm identity: 289
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 22, 29

Conread position: 64-490
Cow position:
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 64-490
Cow position:
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 75

Conread position: 77-488
Cow position:
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 195

Conread position: 80-490
Cow position:
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 192

Conread position: 80-490
Cow position:
Alignm length: 413
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 147

Conread position: 81-490
Cow position:
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 61

Conread position: 81-490
Cow position:
Alignm length: 411
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 93

Conread position: 81-490
Cow position:
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 184

Conread position: 84-488
Cow position:
Alignm length: 407
Alignm identity: 276
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 286, 45

Conread position: 91-490
Cow position:
Alignm length: 401
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 318, 37

Conread position: 93-440
Cow position:
Alignm length: 349
Alignm identity: 227
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 317, 65

Conread position: 94-466
Cow position:
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 47

Conread position: 94-466
Cow position:
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 39

Conread position: 94-490
Cow position:
Alignm length: 404
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 163

Conread position: 94-490
Cow position:
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 110

Conread position: 102-488
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 104-382
Cow position:
Alignm length: 279
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 233, 0

Conread position: 104-443
Cow position:
Alignm length: 351
Alignm identity: 232
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 238, 25

Conread position: 104-489
Cow position:
Alignm length: 387
Alignm identity: 260
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 306, 37

Conread position: 104-490
Cow position:
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 163

Conread position: 105-490
Cow position:
Alignm length: 392
Alignm identity: 248
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 68, 153

Conread position: 106-487
Cow position:
Alignm length: 383
Alignm identity: 253
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 303, 120

Conread position: 107-490
Cow position:
Alignm length: 385
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 165

Conread position: 114-490
Cow position:
Alignm length: 385
Alignm identity: 262
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 25

Conread position: 128-466
Cow position:
Alignm length: 341
Alignm identity: 231
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 281, 106

Conread position: 133-346
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 62

Conread position: 134-406
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 131, 0

Conread position: 138-402
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 27

Conread position: 138-418
Cow position:
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 146, 111

Conread position: 138-438
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 62, 7

Conread position: 145-462
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 110

Conread position: 145-464
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 9, 121

Conread position: 145-488
Cow position:
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 100

Conread position: 146-490
Cow position:
Alignm length: 351
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 123

Conread position: 147-490
Cow position:
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 197

Conread position: 152-440
Cow position:
Alignm length: 293
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 43

Conread position: 153-490
Cow position:
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 256, 45

Conread position: 155-490
Cow position:
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 133

Conread position: 155-490
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 117

Conread position: 155-490
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 69

Conread position: 155-490
Cow position:
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 110

Conread position: 155-490
Cow position:
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 55

Conread position: 156-313
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 156-440
Cow position:
Alignm length: 286
Alignm identity: 171
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 253, 127

Conread position: 159-490
Cow position:
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 113

Conread position: 162-490
Cow position:
Alignm length: 331
Alignm identity: 233
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 131, 75

Conread position: 165-487
Cow position:
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 46

Conread position: 165-490
Cow position:
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 100

Conread position: 169-466
Cow position:
Alignm length: 299
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 240, 103

Conread position: 172-490
Cow position:
Alignm length: 322
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 234, 81

Conread position: 173-489
Cow position:
Alignm length: 321
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 104, 26

Conread position: 176-466
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 233, 30

Conread position: 194-490
Cow position:
Alignm length: 298
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 216, 85

Conread position: 216-486
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 193, 51

Conread position: 239-488
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 169, 25

Conread position: 253-443
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 156, 97

Conread position: 259-490
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 95

Conread position: 283-490
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 64

Conread position: 284-490
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 65

Conread position: 304-490
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 107, 47

Show alignments to all cow chromosomes.