Cow genome map

Conread name: rspc012_d20.y1

Conread position: 2-489
Cow position:
Alignm length: 491
Alignm identity: 335
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 80, 29

Conread position: 3-368
Cow position:
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 71

Conread position: 3-447
Cow position:
Alignm length: 446
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-447
Cow position:
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 61

Conread position: 3-489
Cow position:
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 71

Conread position: 3-489
Cow position:
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 52

Conread position: 3-489
Cow position:
Alignm length: 488
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 70

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 3-490
Cow position:
Alignm length: 508
Alignm identity: 339
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 127

Conread position: 3-490
Cow position:
Alignm length: 492
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 71

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 68

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 69

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 69

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 74

Conread position: 4-447
Cow position:
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 117

Conread position: 7-385
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 42

Conread position: 7-490
Cow position:
Alignm length: 487
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 67

Conread position: 12-436
Cow position:
Alignm length: 430
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 118

Conread position: 12-490
Cow position:
Alignm length: 489
Alignm identity: 308
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 70, 115

Conread position: 14-490
Cow position:
Alignm length: 481
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 60

Conread position: 15-425
Cow position:
Alignm length: 421
Alignm identity: 274
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 39

Conread position: 38-490
Cow position:
Alignm length: 458
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 91

Conread position: 40-495
Cow position:
Alignm length: 461
Alignm identity: 294
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 30

Conread position: 50-488
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 8

Conread position: 55-490
Cow position:
Alignm length: 438
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 128

Conread position: 55-490
Cow position:
Alignm length: 439
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 149

Conread position: 58-303
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 31, 208

Conread position: 60-368
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 22, 195

Conread position: 60-459
Cow position:
Alignm length: 402
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 60-466
Cow position:
Alignm length: 409
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 53

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 213

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 224

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 140

Conread position: 60-490
Cow position:
Alignm length: 438
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 172

Conread position: 60-490
Cow position:
Alignm length: 435
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 55

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 60-491
Cow position:
Alignm length: 435
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 168

Conread position: 61-490
Cow position:
Alignm length: 445
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 223

Conread position: 68-489
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 32

Conread position: 81-371
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 185

Conread position: 81-407
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 81-490
Cow position:
Alignm length: 411
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 184

Conread position: 82-395
Cow position:
Alignm length: 314
Alignm identity: 200
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 93-488
Cow position:
Alignm length: 403
Alignm identity: 260
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 260

Conread position: 94-347
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 95-348
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 50

Conread position: 104-470
Cow position:
Alignm length: 378
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 28

Conread position: 106-490
Cow position:
Alignm length: 386
Alignm identity: 264
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 303, 115

Conread position: 122-490
Cow position:
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 144

Conread position: 132-436
Cow position:
Alignm length: 306
Alignm identity: 213
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 277, 87

Conread position: 134-462
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 275, 100

Conread position: 137-421
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 135, 8

Conread position: 137-490
Cow position:
Alignm length: 355
Alignm identity: 249
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 271, 15

Conread position: 147-440
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 123

Conread position: 150-490
Cow position:
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 114

Conread position: 152-369
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 126, 201

Conread position: 185-438
Cow position:
Alignm length: 258
Alignm identity: 181
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 161, 68

Conread position: 186-443
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 139

Conread position: 223-490
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 186, 120

Conread position: 251-489
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 157, 91

Conread position: 275-490
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 134, 13

Show alignments to all cow chromosomes.