Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-275
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 98
               

               Conread position:
               3-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 57
               

               Conread position:
               3-318
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-348
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               66, 50
               

               Conread position:
               3-407
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-407
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               46, 53
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               3-488
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               406, 262
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               347, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               406, 79
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 74
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 70
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 70
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               406, 12
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               4-488
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 45
               

               Conread position:
               7-487
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 281
               

               Conread position:
               7-489
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               401, 67
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 77
               

               Conread position:
               15-488
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               328
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               40, 249
               

               Conread position:
               33-490
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               375, 13
               

               Conread position:
               40-490
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 24
               

               Conread position:
               50-466
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 14
               

               Conread position:
               50-466
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 14
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 14
               

               Conread position:
               60-336
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               29, 200
               

               Conread position:
               60-407
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 168
               

               Conread position:
               60-408
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               60-466
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               60-486
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 224
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 295
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 202
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 287
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 208
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 224
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 142
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 202
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 6
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 225
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 213
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 283
               

               Conread position:
               67-442
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               75-488
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 59
               

               Conread position:
               75-488
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 59
               

               Conread position:
               81-246
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-399
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               286
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               152, 223
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 103
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 183
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 190
               

               Conread position:
               82-489
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 183
               

               Conread position:
               88-487
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 20
               

               Conread position:
               89-488
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 176
               

               Conread position:
               91-487
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               91-490
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 252
               

               Conread position:
               92-440
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               73, 169
               

               Conread position:
               96-490
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 169
               

               Conread position:
               104-435
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               302, 24
               

               Conread position:
               104-488
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 22
               

               Conread position:
               106-275
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               160, 12
               

               Conread position:
               106-422
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               106-464
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               270, 68
               

               Conread position:
               106-489
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 180
               

               Conread position:
               114-314
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               114-349
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               223, 148
               

               Conread position:
               114-489
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               114-489
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 152
               

               Conread position:
               114-490
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 152
               

               Conread position:
               122-434
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               15, 225
               

               Conread position:
               122-488
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 246
               

               Conread position:
               133-348
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               134-466
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 138
               

               Conread position:
               134-490
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               155, 68
               

               Conread position:
               138-424
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               142-402
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               123, 83
               

               Conread position:
               147-385
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 125
               

               Conread position:
               148-440
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               265, 11
               

               Conread position:
               150-489
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               258, 86
               

               Conread position:
               152-490
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               257, 38
               

               Conread position:
               153-490
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 130
               

               Conread position:
               154-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               156-458
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               252, 123
               

               Conread position:
               162-447
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 190
               

               Conread position:
               165-462
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               166-490
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 97
               

               Conread position:
               271-488
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               99, 16
               
Show alignments to all cow chromosomes.