Cow genome map


           Conread name:
           rspc012_d20.y1
        

               Conread position:
               3-279
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               3-327
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 263
               

               Conread position:
               3-347
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               3-385
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               368, 71
               

               Conread position:
               3-467
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-487
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               320
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               216, 71
               

               Conread position:
               3-487
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 63
               

               Conread position:
               3-488
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 122
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 68
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 9
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 46
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               405, 71
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-490
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 123
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 64
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 45
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 135
               

               Conread position:
               4-490
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 18
               

               Conread position:
               6-447
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               305
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               75, 132
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               7-490
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               329
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               75, 263
               

               Conread position:
               12-490
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 121
               

               Conread position:
               14-490
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               394, 60
               

               Conread position:
               15-236
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               15-273
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               6, 117
               

               Conread position:
               15-385
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               15-488
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               393, 59
               

               Conread position:
               15-490
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               22-494
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 42
               

               Conread position:
               31-490
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               33-488
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               37-388
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               38-376
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               38-490
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               370, 8
               

               Conread position:
               50-447
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               359, 91
               

               Conread position:
               50-488
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 14
               

               Conread position:
               50-489
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 14
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 14
               

               Conread position:
               50-490
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 14
               

               Conread position:
               60-376
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 201
               

               Conread position:
               60-489
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 225
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 209
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               297
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 140
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 200
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               60-490
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 206
               

               Conread position:
               81-247
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-490
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 184
               

               Conread position:
               85-488
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               86-464
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               11, 191
               

               Conread position:
               91-439
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               263, 132
               

               Conread position:
               94-440
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               102-424
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               104-326
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               104-466
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 66
               

               Conread position:
               105-373
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               105-458
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 109
               

               Conread position:
               114-489
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 27
               

               Conread position:
               114-490
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 156
               

               Conread position:
               115-419
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               115-490
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 249
               

               Conread position:
               122-466
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               129-490
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               279, 208
               

               Conread position:
               133-488
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 25
               

               Conread position:
               136-490
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 128
               

               Conread position:
               136-493
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               126, 59
               

               Conread position:
               137-348
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               138-422
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               270, 115
               

               Conread position:
               141-440
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               225, 0
               

               Conread position:
               146-462
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 81
               

               Conread position:
               147-490
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 118
               

               Conread position:
               150-444
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 78
               

               Conread position:
               152-440
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               153-403
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               153-483
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 128
               

               Conread position:
               155-435
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 126
               

               Conread position:
               155-455
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               155-466
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 84
               

               Conread position:
               155-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 5
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               161-490
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               162-443
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 192
               

               Conread position:
               163-489
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               168-466
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 104
               

               Conread position:
               176-490
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 84
               

               Conread position:
               177-477
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               205-490
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 141
               

               Conread position:
               226-490
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 121
               

               Conread position:
               229-490
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               243-490
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               166, 36
               

               Conread position:
               272-490
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               137, 75
               

               Conread position:
               283-490
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               125, 64
               

               Conread position:
               306-490
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               103, 44
               

               Conread position:
               346-490
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 8
               
Show alignments to all cow chromosomes.