Cow genome map

Conread name: rspc012_d20.y1

Conread position: 2-490
Cow position: chr8:33588062-33588536 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 69

Conread position: 2-490
Cow position: chr8:53427012-53427485 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 97

Conread position: 3-219
Cow position: chr8:19229486-19229699 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 86, 126

Conread position: 3-300
Cow position: chr8:38087811-38088095 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 3-314
Cow position: chr8:3784266-3784564 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 3-327
Cow position: chr8:42161967-42161660 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 86, 65

Conread position: 3-408
Cow position: chr8:38607842-38607428 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 78

Conread position: 3-443
Cow position: chr8:13735333-13735758 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 96

Conread position: 3-487
Cow position: chr8:11757397-11757858 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 318
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 414, 88

Conread position: 3-487
Cow position: chr8:32319862-32319391 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-488
Cow position: chr8:4686081-4686548 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 3-489
Cow position: chr8:8402514-8402045 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 71

Conread position: 3-490
Cow position: chr8:8316940-8316479 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 63

Conread position: 3-490
Cow position: chr8:10743925-10743473 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 326
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 403, 64

Conread position: 3-490
Cow position: chr8:11800919-11801393 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 74

Conread position: 3-490
Cow position: chr8:19050165-19050641 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 52

Conread position: 3-490
Cow position: chr8:25522085-25522556 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position: chr8:27984128-27983638 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 347

Conread position: 3-490
Cow position: chr8:29441139-29440670 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 30

Conread position: 3-490
Cow position: chr8:36636857-36636384 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position: chr8:36637972-36637499 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position: chr8:38390057-38390525 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 46

Conread position: 3-490
Cow position: chr8:44121538-44122036 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 80

Conread position: 3-490
Cow position: chr8:44244886-44244417 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 3-490
Cow position: chr8:45796057-45795586 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position: chr8:47662640-47662169 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 67

Conread position: 3-490
Cow position: chr8:60059890-60060361 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 41

Conread position: 3-494
Cow position: chr8:8904816-8904362 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 329
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 4-246
Cow position: chr8:14592722-14592496 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 4-488
Cow position: chr8:8230116-8229626 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 52

Conread position: 4-490
Cow position: chr8:24916642-24916180 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 70

Conread position: 7-300
Cow position: chr8:24421095-24420818 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 74, 0

Conread position: 7-459
Cow position: chr8:2171708-2171253 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 265

Conread position: 7-490
Cow position: chr8:1154614-1154150 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 89

Conread position: 7-490
Cow position: chr8:9540813-9540334 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 285

Conread position: 7-490
Cow position: chr8:41739235-41739704 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 310
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 86

Conread position: 12-488
Cow position: chr8:23770334-23770795 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 62

Conread position: 12-490
Cow position: chr8:25407155-25407606 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 43

Conread position: 12-490
Cow position: chr8:49214122-49214584 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 12-490
Cow position: chr8:59263198-59262736 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 62

Conread position: 13-466
Cow position: chr8:11970875-11970430 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 76

Conread position: 16-490
Cow position: chr8:45161664-45161207 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 22-296
Cow position: chr8:5873336-5873605 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 42

Conread position: 36-490
Cow position: chr8:44077306-44076864 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 63

Conread position: 39-436
Cow position: chr8:33429637-33430020 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 90

Conread position: 39-488
Cow position: chr8:50289460-50288995 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 25

Conread position: 48-459
Cow position: chr8:61198395-61197989 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 16

Conread position: 50-251
Cow position: chr8:14929305-14929106 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 50-348
Cow position: chr8:25777152-25776857 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 50-490
Cow position: chr8:8909959-8910377 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 10

Conread position: 50-490
Cow position: chr8:19328677-19329113 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 10

Conread position: 56-466
Cow position: chr8:47884759-47885167 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 60-320
Cow position: chr8:11831482-11831730 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 47, 15

Conread position: 60-419
Cow position: chr8:6065986-6065636 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 60-459
Cow position: chr8:37657530-37657144 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 202

Conread position: 60-486
Cow position: chr8:1318770-1319197 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 291

Conread position: 60-488
Cow position: chr8:47074001-47074425 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 46

Conread position: 60-489
Cow position: chr8:9734980-9735403 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 60-490
Cow position: chr8:2885482-2885902 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 190

Conread position: 60-490
Cow position: chr8:8557399-8556990 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 22, 72

Conread position: 60-490
Cow position: chr8:9274751-9275177 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 168

Conread position: 60-490
Cow position: chr8:10748115-10748534 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 192

Conread position: 60-490
Cow position: chr8:12504732-12505155 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 60-490
Cow position: chr8:22572564-22572137 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 60-490
Cow position: chr8:26007032-26006609 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 60-490
Cow position: chr8:27578140-27578565 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 203

Conread position: 60-490
Cow position: chr8:32439711-32439286 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 60-490
Cow position: chr8:46945398-46944972 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 240

Conread position: 60-490
Cow position: chr8:47070078-47069649 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 60-495
Cow position: chr8:8518843-8518418 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 202

Conread position: 70-490
Cow position: chr8:42467145-42467536 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 25

Conread position: 79-308
Cow position: chr8:11761113-11761342 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 59

Conread position: 83-487
Cow position: chr8:19174011-19173615 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 109

Conread position: 84-490
Cow position: chr8:5015926-5016340 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 286
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 38

Conread position: 84-490
Cow position: chr8:44713553-44713151 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 254
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 196, 14

Conread position: 93-320
Cow position: chr8:48370792-48371023 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 25

Conread position: 93-490
Cow position: chr8:50993556-50993945 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 172

Conread position: 93-494
Cow position: chr8:17310789-17311180 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 51

Conread position: 104-393
Cow position: chr8:46458947-46458675 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 104-476
Cow position: chr8:9264495-9264139 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 241
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 78

Conread position: 104-488
Cow position: chr8:12664248-12663864 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 242

Conread position: 107-372
Cow position: chr8:25542376-25542634 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 161, 0

Conread position: 108-424
Cow position: chr8:38579516-38579200 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 202
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 188, 49

Conread position: 109-489
Cow position: chr8:44693088-44693449 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 32

Conread position: 110-466
Cow position: chr8:11821095-11821456 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 157, 219

Conread position: 114-490
Cow position: chr8:32632227-32631868 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 115-425
Cow position: chr8:42658674-42658371 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 294, 213

Conread position: 115-490
Cow position: chr8:45448239-45448606 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 20

Conread position: 121-489
Cow position: chr8:39160109-39160474 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 232
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 154, 89

Conread position: 134-400
Cow position: chr8:8596089-8595827 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 134-490
Cow position: chr8:45317315-45316970 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 28

Conread position: 141-488
Cow position: chr8:37931108-37931450 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 131

Conread position: 144-490
Cow position: chr8:42483746-42484086 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 204
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 235, 11

Conread position: 145-464
Cow position: chr8:32930321-32930646 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 183

Conread position: 145-488
Cow position: chr8:61035537-61035209 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 34

Conread position: 149-494
Cow position: chr8:27377974-27378309 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 285, 79

Conread position: 155-437
Cow position: chr8:27924949-27925232 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 196

Conread position: 155-464
Cow position: chr8:45188898-45189227 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 123, 216

Conread position: 155-466
Cow position: chr8:47670284-47670589 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 109

Conread position: 155-489
Cow position: chr8:44036939-44036625 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 71, 131

Conread position: 169-489
Cow position: chr8:23216595-23216897 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 242, 109

Conread position: 182-490
Cow position: chr8:39196363-39196058 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 99

Conread position: 206-490
Cow position: chr8:46091982-46091704 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 203, 61

Conread position: 227-490
Cow position: chr8:14592290-14592037 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 52

Conread position: 238-484
Cow position: chr8:23766478-23766235 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 46

Conread position: 242-490
Cow position: chr8:14929079-14928836 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 152, 25

Conread position: 349-490
Cow position: chr8:36292186-36292326 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 62, 120

Show alignments to all cow chromosomes.