Cow genome map

Conread name: rspc012_d20.y1

Conread position: 2-490
Cow position:
Alignm length: 490
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 72

Conread position: 3-328
Cow position:
Alignm length: 327
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 209, 64

Conread position: 3-447
Cow position:
Alignm length: 448
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 71

Conread position: 3-467
Cow position:
Alignm length: 466
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-489
Cow position:
Alignm length: 488
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 496
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 71

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 70

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 30

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 63

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 61

Conread position: 3-490
Cow position:
Alignm length: 490
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 3-490
Cow position:
Alignm length: 498
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 71

Conread position: 3-490
Cow position:
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 46

Conread position: 4-302
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 4-464
Cow position:
Alignm length: 463
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 9

Conread position: 4-490
Cow position:
Alignm length: 496
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 56

Conread position: 4-490
Cow position:
Alignm length: 495
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 33

Conread position: 7-488
Cow position:
Alignm length: 500
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 304

Conread position: 12-490
Cow position:
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 37

Conread position: 15-462
Cow position:
Alignm length: 451
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 52

Conread position: 15-464
Cow position:
Alignm length: 455
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 49

Conread position: 16-441
Cow position:
Alignm length: 437
Alignm identity: 274
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 54

Conread position: 16-495
Cow position:
Alignm length: 483
Alignm identity: 315
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 72, 87

Conread position: 34-277
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 34

Conread position: 44-443
Cow position:
Alignm length: 405
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 31

Conread position: 50-488
Cow position:
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 14

Conread position: 50-489
Cow position:
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 14

Conread position: 50-490
Cow position:
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 238

Conread position: 50-490
Cow position:
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 14

Conread position: 50-491
Cow position:
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 14

Conread position: 51-490
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 214

Conread position: 54-462
Cow position:
Alignm length: 411
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 73

Conread position: 60-408
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 201

Conread position: 60-420
Cow position:
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 204

Conread position: 60-467
Cow position:
Alignm length: 414
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 216

Conread position: 60-488
Cow position:
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 60-488
Cow position:
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 60-490
Cow position:
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 168

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 205

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 291

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 60-490
Cow position:
Alignm length: 435
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 215

Conread position: 60-490
Cow position:
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 60-495
Cow position:
Alignm length: 439
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 61-404
Cow position:
Alignm length: 345
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 69

Conread position: 61-418
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 66

Conread position: 61-490
Cow position:
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 67-490
Cow position:
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 133

Conread position: 68-490
Cow position:
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 34

Conread position: 70-496
Cow position:
Alignm length: 429
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 176

Conread position: 71-488
Cow position:
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 87

Conread position: 80-489
Cow position:
Alignm length: 413
Alignm identity: 264
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 9

Conread position: 80-490
Cow position:
Alignm length: 412
Alignm identity: 271
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 329, 77

Conread position: 81-450
Cow position:
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 184

Conread position: 81-467
Cow position:
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 173

Conread position: 81-490
Cow position:
Alignm length: 411
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 27

Conread position: 81-490
Cow position:
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 183

Conread position: 84-488
Cow position:
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 182

Conread position: 94-490
Cow position:
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 44

Conread position: 104-440
Cow position:
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 263, 59

Conread position: 104-466
Cow position:
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 147

Conread position: 104-490
Cow position:
Alignm length: 390
Alignm identity: 258
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 17

Conread position: 105-490
Cow position:
Alignm length: 394
Alignm identity: 262
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 10, 196

Conread position: 106-295
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 159, 23

Conread position: 106-478
Cow position:
Alignm length: 376
Alignm identity: 257
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 265, 90

Conread position: 111-494
Cow position:
Alignm length: 390
Alignm identity: 260
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 79

Conread position: 114-490
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 97

Conread position: 114-490
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 152

Conread position: 133-490
Cow position:
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 134-399
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 131, 0

Conread position: 134-490
Cow position:
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 219

Conread position: 137-471
Cow position:
Alignm length: 341
Alignm identity: 218
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 207

Conread position: 137-490
Cow position:
Alignm length: 356
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 142

Conread position: 139-489
Cow position:
Alignm length: 364
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 122

Conread position: 141-435
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 126

Conread position: 142-490
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 85

Conread position: 145-407
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 121

Conread position: 147-490
Cow position:
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 52

Conread position: 147-490
Cow position:
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 121

Conread position: 153-487
Cow position:
Alignm length: 342
Alignm identity: 228
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 59, 42

Conread position: 155-487
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 124, 167

Conread position: 155-490
Cow position:
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 156-466
Cow position:
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 116

Conread position: 156-490
Cow position:
Alignm length: 349
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 13, 47

Conread position: 156-490
Cow position:
Alignm length: 349
Alignm identity: 244
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 218, 107

Conread position: 159-313
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 160-458
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 249, 128

Conread position: 161-440
Cow position:
Alignm length: 281
Alignm identity: 199
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 220, 177

Conread position: 171-490
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 237, 89

Conread position: 173-378
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 89, 76

Conread position: 176-489
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 78, 82

Conread position: 182-490
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 82

Conread position: 182-490
Cow position:
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 166

Conread position: 214-467
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 19, 66

Conread position: 228-437
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 180, 36

Conread position: 250-490
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 102

Show alignments to all cow chromosomes.