Cow genome map

Conread name: rspc012_i4.y1

Conread position: 1-170
Cow position: chr12:25188189-25188023 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 27

Conread position: 1-308
Cow position: chr12:5899532-5899229 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 97

Conread position: 3-200
Cow position: chr12:4714368-4714175 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 71

Conread position: 3-205
Cow position: chr12:12300921-12300730 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 75

Conread position: 3-365
Cow position: chr12:5801044-5800683 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 4-306
Cow position: chr12:5714633-5714333 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 189

Conread position: 4-387
Cow position: chr12:31228572-31228210 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 10

Conread position: 5-239
Cow position: chr12:18963926-18964158 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 5-313
Cow position: chr12:44517736-44518042 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 70

Conread position: 5-317
Cow position: chr12:33458149-33457843 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 5-385
Cow position: chr12:15429594-15429975 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 111

Conread position: 6-300
Cow position: chr12:43551257-43551574 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 66, 239

Conread position: 6-350
Cow position: chr12:16851006-16851348 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 200

Conread position: 9-215
Cow position: chr12:30194706-30194500 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 13

Conread position: 12-287
Cow position: chr12:12699771-12700052 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 54, 8

Conread position: 12-305
Cow position: chr12:34007303-34007004 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 116

Conread position: 12-349
Cow position: chr12:18572626-18572298 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 15-374
Cow position: chr12:32786005-32786347 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 27, 108

Conread position: 17-150
Cow position: chr12:7110186-7110056 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 17-162
Cow position: chr12:3623683-3623538 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 17-167
Cow position: chr12:36790823-36790972 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 44

Conread position: 17-196
Cow position: chr12:29921796-29921973 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 173, 56

Conread position: 17-197
Cow position: chr12:38774254-38774431 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 139, 41

Conread position: 17-218
Cow position: chr12:37088917-37088717 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 14

Conread position: 17-245
Cow position: chr12:4162374-4162606 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 118

Conread position: 17-246
Cow position: chr12:18765984-18766217 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 175

Conread position: 17-254
Cow position: chr12:23574752-23574526 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 83

Conread position: 17-267
Cow position: chr12:17774783-17774548 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 141, 49

Conread position: 17-268
Cow position: chr12:40028765-40029013 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 177

Conread position: 17-287
Cow position: chr12:34429167-34429420 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 17-306
Cow position: chr12:19715047-19715323 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 17-325
Cow position: chr12:19664543-19664830 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 17-347
Cow position: chr12:20377548-20377218 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 17-356
Cow position: chr12:15531047-15530716 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 66, 56

Conread position: 17-372
Cow position: chr12:44595821-44596176 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 143

Conread position: 17-374
Cow position: chr12:9482316-9482659 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 66

Conread position: 17-374
Cow position: chr12:15938274-15938628 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 184

Conread position: 17-386
Cow position: chr12:28010919-28011275 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 17-386
Cow position: chr12:31532411-31532789 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 17-386
Cow position: chr12:42181140-42181514 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 168

Conread position: 18-159
Cow position: chr12:10942275-10942133 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 131

Conread position: 18-163
Cow position: chr12:17666291-17666143 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 18-203
Cow position: chr12:22131953-22132140 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 76

Conread position: 18-206
Cow position: chr12:25989217-25989392 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 139, 11

Conread position: 18-246
Cow position: chr12:15163129-15162914 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 7, 50

Conread position: 18-316
Cow position: chr12:20479343-20479618 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 183, 57

Conread position: 18-325
Cow position: chr12:26782872-26782566 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 31

Conread position: 18-349
Cow position: chr12:7978030-7977711 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 108

Conread position: 18-349
Cow position: chr12:34473631-34473946 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 9

Conread position: 18-385
Cow position: chr12:28572675-28572328 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 18-386
Cow position: chr12:29483896-29484264 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 138

Conread position: 19-180
Cow position: chr12:27365915-27365752 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 17

Conread position: 19-281
Cow position: chr12:8710810-8710560 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 10, 58

Conread position: 20-149
Cow position: chr12:15700064-15699931 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 110

Conread position: 20-154
Cow position: chr12:21911789-21911654 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 28

Conread position: 20-160
Cow position: chr12:38184580-38184443 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 29

Conread position: 20-162
Cow position: chr12:42174403-42174264 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 20-167
Cow position: chr12:31517185-31517328 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 98

Conread position: 20-172
Cow position: chr12:9894768-9894616 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 141, 53

Conread position: 20-175
Cow position: chr12:4820941-4820787 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 20-183
Cow position: chr12:23916832-23916665 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 20-183
Cow position: chr12:25340506-25340336 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 37

Conread position: 20-184
Cow position: chr12:15050630-15050798 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 20-200
Cow position: chr12:10491258-10491077 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 104

Conread position: 20-204
Cow position: chr12:7299474-7299666 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 55

Conread position: 20-208
Cow position: chr12:23855825-23855632 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 20-212
Cow position: chr12:33976185-33975998 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 20-216
Cow position: chr12:25452461-25452654 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 81, 106

Conread position: 20-219
Cow position: chr12:26217838-26218037 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 138

Conread position: 20-221
Cow position: chr12:42163032-42162828 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 34

Conread position: 20-230
Cow position: chr12:3060101-3060310 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 57, 50

Conread position: 20-231
Cow position: chr12:31948101-31947902 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 20-236
Cow position: chr12:3057050-3056835 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 50

Conread position: 20-239
Cow position: chr12:3906460-3906239 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 139

Conread position: 20-241
Cow position: chr12:24663100-24662884 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 20-244
Cow position: chr12:1030966-1030746 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 111

Conread position: 20-246
Cow position: chr12:12030842-12031071 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 58, 191

Conread position: 20-246
Cow position: chr12:43582761-43582542 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 58, 77

Conread position: 20-253
Cow position: chr12:34161399-34161174 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 208, 13

Conread position: 20-263
Cow position: chr12:23798087-23797850 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 52

Conread position: 20-272
Cow position: chr12:42282853-42283099 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 139, 46

Conread position: 20-277
Cow position: chr12:5635467-5635715 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 20-279
Cow position: chr12:24107559-24107806 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 45

Conread position: 20-286
Cow position: chr12:30661964-30662226 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 59

Conread position: 20-290
Cow position: chr12:27562842-27563117 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 21

Conread position: 20-297
Cow position: chr12:12178909-12178634 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 35

Conread position: 20-298
Cow position: chr12:1505009-1504739 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 55, 36

Conread position: 20-305
Cow position: chr12:9914775-9914494 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 172

Conread position: 20-305
Cow position: chr12:28582518-28582787 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 20-306
Cow position: chr12:3510546-3510269 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 20-306
Cow position: chr12:22882042-22881756 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 20-311
Cow position: chr12:6410749-6411029 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 20-313
Cow position: chr12:1284476-1284761 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 55

Conread position: 20-313
Cow position: chr12:37993746-37994028 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 20-315
Cow position: chr12:16543595-16543873 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 20-316
Cow position: chr12:30590750-30590471 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 20-317
Cow position: chr12:4866803-4866511 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 54

Conread position: 20-321
Cow position: chr12:30805839-30805543 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 55

Conread position: 20-327
Cow position: chr12:29995476-29995779 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 53

Conread position: 20-334
Cow position: chr12:8868889-8869206 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 183

Conread position: 20-335
Cow position: chr12:13007787-13008100 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 70

Conread position: 20-341
Cow position: chr12:34385521-34385845 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 187

Conread position: 20-343
Cow position: chr12:34466018-34466329 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 115

Conread position: 20-349
Cow position: chr12:46333334-46333034 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 49, 0

Conread position: 20-361
Cow position: chr12:1223354-1223693 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 39

Conread position: 20-361
Cow position: chr12:4341758-4342072 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 54

Conread position: 20-369
Cow position: chr12:2711484-2711133 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 189

Conread position: 20-371
Cow position: chr12:1773679-1774024 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 157

Conread position: 20-373
Cow position: chr12:30596453-30596103 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 53

Conread position: 20-374
Cow position: chr12:2286569-2286216 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 49

Conread position: 20-374
Cow position: chr12:17881847-17881508 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 78

Conread position: 20-374
Cow position: chr12:18943672-18944014 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 51

Conread position: 20-374
Cow position: chr12:19866225-19865878 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 50

Conread position: 20-374
Cow position: chr12:30753706-30753362 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 50

Conread position: 20-374
Cow position: chr12:40910303-40910654 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 80

Conread position: 20-374
Cow position: chr12:41581100-41580753 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 52

Conread position: 20-374
Cow position: chr12:47804143-47803791 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 142

Conread position: 20-385
Cow position: chr12:3197255-3196878 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 49

Conread position: 20-385
Cow position: chr12:3579272-3578909 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 16

Conread position: 20-385
Cow position: chr12:6241305-6240932 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 87

Conread position: 20-385
Cow position: chr12:7000617-7000979 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 172

Conread position: 20-385
Cow position: chr12:11583376-11583031 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 47

Conread position: 20-385
Cow position: chr12:30919411-30919061 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 20-386
Cow position: chr12:6210172-6210543 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 55

Conread position: 20-386
Cow position: chr12:12304373-12304028 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 102

Conread position: 20-386
Cow position: chr12:15173809-15173443 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 55

Conread position: 20-386
Cow position: chr12:20312184-20312535 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 123

Conread position: 20-386
Cow position: chr12:27563391-27563753 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 80

Conread position: 20-386
Cow position: chr12:30438226-30437875 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 20-387
Cow position: chr12:17717055-17716702 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 31

Conread position: 20-396
Cow position: chr12:35368628-35368242 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 182

Conread position: 21-187
Cow position: chr12:19507622-19507451 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 134

Conread position: 21-246
Cow position: chr12:29770587-29770809 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 190

Conread position: 21-289
Cow position: chr12:43942459-43942200 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 112

Conread position: 21-308
Cow position: chr12:20776936-20777227 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 145

Conread position: 21-327
Cow position: chr12:11056860-11056559 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 112

Conread position: 21-337
Cow position: chr12:34148376-34148678 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 60

Conread position: 21-374
Cow position: chr12:15122309-15121978 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 169

Conread position: 21-374
Cow position: chr12:18550866-18550532 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 74

Conread position: 21-385
Cow position: chr12:18123654-18123312 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 21-386
Cow position: chr12:5631894-5632250 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 111

Conread position: 21-386
Cow position: chr12:29969562-29969203 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 11

Conread position: 21-387
Cow position: chr12:22047455-22047109 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 53

Conread position: 22-206
Cow position: chr12:37536506-37536689 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 133, 53

Conread position: 22-380
Cow position: chr12:2670248-2669885 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 13

Conread position: 23-162
Cow position: chr12:46120851-46120986 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 23-163
Cow position: chr12:19258263-19258122 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 23-188
Cow position: chr12:18420457-18420288 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 6, 85

Conread position: 23-197
Cow position: chr12:11587757-11587576 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 86

Conread position: 23-206
Cow position: chr12:4768909-4768726 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 76

Conread position: 23-225
Cow position: chr12:33851344-33851140 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 103

Conread position: 23-239
Cow position: chr12:30210466-30210247 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 79

Conread position: 23-246
Cow position: chr12:30476465-30476241 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 23-246
Cow position: chr12:35378185-35377963 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 78

Conread position: 23-261
Cow position: chr12:24211397-24211163 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 102

Conread position: 23-281
Cow position: chr12:28559281-28559024 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 40, 21

Conread position: 23-288
Cow position: chr12:44846369-44846115 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 186, 21

Conread position: 23-294
Cow position: chr12:18388307-18388566 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 23-306
Cow position: chr12:5906039-5905761 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 127

Conread position: 23-316
Cow position: chr12:730953-731231 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 58, 32

Conread position: 23-316
Cow position: chr12:29411506-29411790 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 102

Conread position: 23-345
Cow position: chr12:44622338-44622021 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 65

Conread position: 23-349
Cow position: chr12:4116472-4116166 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 23-362
Cow position: chr12:18577822-18577494 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 73

Conread position: 23-373
Cow position: chr12:24032988-24032644 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 50

Conread position: 23-374
Cow position: chr12:2241906-2242253 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 77

Conread position: 23-374
Cow position: chr12:3950362-3950699 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 89

Conread position: 23-374
Cow position: chr12:25561353-25561007 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 66

Conread position: 23-374
Cow position: chr12:44013857-44014204 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 48

Conread position: 23-379
Cow position: chr12:19691248-19691602 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 189

Conread position: 23-379
Cow position: chr12:41159573-41159215 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 76

Conread position: 23-381
Cow position: chr12:36012630-36012993 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 54, 121

Conread position: 23-385
Cow position: chr12:30170652-30170287 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 162

Conread position: 23-386
Cow position: chr12:3568924-3568574 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 44

Conread position: 23-386
Cow position: chr12:17001241-17000886 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 23-386
Cow position: chr12:19869446-19869096 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 23-386
Cow position: chr12:36500965-36501323 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 51

Conread position: 23-396
Cow position: chr12:42966983-42966613 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 136

Conread position: 24-152
Cow position: chr12:30517852-30517731 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 24-167
Cow position: chr12:41215899-41216045 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 127
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 24-168
Cow position: chr12:15038994-15039138 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 63

Conread position: 24-180
Cow position: chr12:20636170-20636333 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 25

Conread position: 24-183
Cow position: chr12:4719929-4719768 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 77

Conread position: 24-188
Cow position: chr12:12637201-12637370 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 24-206
Cow position: chr12:37584476-37584298 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 140, 41

Conread position: 24-215
Cow position: chr12:36544659-36544858 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 7, 134

Conread position: 24-221
Cow position: chr12:15762929-15763125 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 28

Conread position: 24-224
Cow position: chr12:22540189-22539987 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 102

Conread position: 24-238
Cow position: chr12:28748924-28748706 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 54, 155

Conread position: 24-246
Cow position: chr12:5658095-5658312 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 139, 49

Conread position: 24-249
Cow position: chr12:20071590-20071824 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 25

Conread position: 24-253
Cow position: chr12:42953919-42954137 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 20, 25

Conread position: 24-257
Cow position: chr12:28471621-28471392 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 51, 175

Conread position: 24-270
Cow position: chr12:5940322-5940083 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 49

Conread position: 24-316
Cow position: chr12:8943242-8943526 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 34

Conread position: 24-316
Cow position: chr12:41474071-41473788 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 82

Conread position: 24-327
Cow position: chr12:941622-941313 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 279

Conread position: 24-358
Cow position: chr12:9710226-9710553 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 66

Conread position: 24-365
Cow position: chr12:35706948-35707287 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 57

Conread position: 24-374
Cow position: chr12:10895571-10895912 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 77

Conread position: 24-380
Cow position: chr12:19508577-19508940 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 305

Conread position: 24-385
Cow position: chr12:22515750-22516111 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 24-386
Cow position: chr12:11836216-11835871 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 108

Conread position: 25-374
Cow position: chr12:31959867-31959530 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 56

Conread position: 26-246
Cow position: chr12:13996044-13996271 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 131, 52

Conread position: 26-306
Cow position: chr12:41091513-41091233 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 23, 18

Conread position: 26-374
Cow position: chr12:42254647-42254297 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 11

Conread position: 26-396
Cow position: chr12:3039491-3039127 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 149

Conread position: 29-207
Cow position: chr12:5639124-5638943 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 152
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 90

Conread position: 29-219
Cow position: chr12:13643208-13643023 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 23

Conread position: 29-315
Cow position: chr12:30688318-30688033 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 108, 50

Conread position: 29-315
Cow position: chr12:40110359-40110083 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 50

Conread position: 30-186
Cow position: chr12:42234032-42233875 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 127, 98

Conread position: 30-225
Cow position: chr12:38484412-38484618 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 30-253
Cow position: chr12:19372131-19372349 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 100

Conread position: 30-303
Cow position: chr12:46314725-46314988 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 19

Conread position: 30-316
Cow position: chr12:3757065-3757343 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 27

Conread position: 30-325
Cow position: chr12:35771045-35771348 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 44

Conread position: 30-374
Cow position: chr12:17031592-17031242 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 172

Conread position: 30-385
Cow position: chr12:4371211-4370861 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 173

Conread position: 30-385
Cow position: chr12:18420946-18421301 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 86

Conread position: 30-386
Cow position: chr12:31429592-31429932 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 175

Conread position: 31-171
Cow position: chr12:20354951-20354804 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 76

Conread position: 31-173
Cow position: chr12:42784284-42784140 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 31-181
Cow position: chr12:44920010-44919859 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 31-198
Cow position: chr12:46714346-46714177 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 57

Conread position: 31-200
Cow position: chr12:30227255-30227422 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 17

Conread position: 31-218
Cow position: chr12:29945352-29945540 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 45

Conread position: 31-223
Cow position: chr12:15204813-15204617 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 160

Conread position: 31-235
Cow position: chr12:18021567-18021368 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 31-239
Cow position: chr12:25820455-25820662 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 127, 97

Conread position: 31-246
Cow position: chr12:24577276-24577490 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 60

Conread position: 31-263
Cow position: chr12:35779950-35780180 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 31-271
Cow position: chr12:4182716-4182957 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 57

Conread position: 31-295
Cow position: chr12:41214346-41214603 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 93

Conread position: 31-306
Cow position: chr12:26317440-26317163 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 43, 121

Conread position: 31-315
Cow position: chr12:25456094-25455809 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 70

Conread position: 31-321
Cow position: chr12:28650932-28650643 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 147

Conread position: 31-353
Cow position: chr12:32400177-32399851 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 46, 210

Conread position: 31-367
Cow position: chr12:18937381-18937032 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 328

Conread position: 31-374
Cow position: chr12:3071084-3070746 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 44

Conread position: 31-374
Cow position: chr12:24440790-24440448 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 47

Conread position: 31-386
Cow position: chr12:7960607-7960935 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 74

Conread position: 31-386
Cow position: chr12:37770852-37770495 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 71

Conread position: 31-386
Cow position: chr12:39486399-39486057 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 55

Conread position: 31-387
Cow position: chr12:6720302-6719947 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 238

Conread position: 31-387
Cow position: chr12:37843028-37843382 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 63

Conread position: 32-211
Cow position: chr12:13017601-13017791 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 39

Conread position: 32-227
Cow position: chr12:19243698-19243902 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 17

Conread position: 32-243
Cow position: chr12:29899457-29899670 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 11

Conread position: 32-294
Cow position: chr12:40008883-40008627 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 131, 11

Conread position: 32-385
Cow position: chr12:45814288-45814639 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 43

Conread position: 32-387
Cow position: chr12:20326746-20326398 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 32-396
Cow position: chr12:38040786-38041141 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 11

Conread position: 33-168
Cow position: chr12:37169973-37170105 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 52

Conread position: 33-235
Cow position: chr12:4596435-4596224 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 131, 41

Conread position: 33-277
Cow position: chr12:17702253-17702500 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 119

Conread position: 33-315
Cow position: chr12:48415539-48415816 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 81

Conread position: 34-294
Cow position: chr12:22617003-22617261 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 10

Conread position: 34-313
Cow position: chr12:32391820-32391542 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 41

Conread position: 34-365
Cow position: chr12:33323524-33323853 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 35-182
Cow position: chr12:46692704-46692561 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 35-236
Cow position: chr12:25280531-25280727 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 97

Conread position: 37-212
Cow position: chr12:38692215-38692389 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 126, 37

Conread position: 37-344
Cow position: chr12:46143791-46143488 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 50

Conread position: 38-292
Cow position: chr12:44438887-44439133 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 94

Conread position: 39-243
Cow position: chr12:38511869-38512075 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 35, 170

Conread position: 39-291
Cow position: chr12:25320887-25320642 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 16

Conread position: 39-297
Cow position: chr12:37728110-37727860 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 37, 123

Conread position: 39-297
Cow position: chr12:37732814-37733064 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 123

Conread position: 39-306
Cow position: chr12:29694079-29694333 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 119, 144

Conread position: 39-337
Cow position: chr12:42684978-42685279 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 40-179
Cow position: chr12:6957933-6957790 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 41-196
Cow position: chr12:7191297-7191452 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 116, 44

Conread position: 43-219
Cow position: chr12:6121325-6121141 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 5

Conread position: 48-161
Cow position: chr12:13988327-13988216 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 48-162
Cow position: chr12:6102868-6102983 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 48-196
Cow position: chr12:30804015-30804166 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 46

Conread position: 48-273
Cow position: chr12:3994916-3994686 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 10, 17

Conread position: 48-292
Cow position: chr12:42698277-42698506 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 92, 23

Conread position: 48-312
Cow position: chr12:34274422-34274162 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 110, 18

Conread position: 48-374
Cow position: chr12:1246261-1245930 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 113

Conread position: 48-386
Cow position: chr12:6226694-6227007 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 27

Conread position: 49-316
Cow position: chr12:3056090-3055830 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 41

Conread position: 50-225
Cow position: chr12:4085865-4085701 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 50-385
Cow position: chr12:35310729-35311048 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 51-244
Cow position: chr12:26514013-26514213 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 182

Conread position: 52-246
Cow position: chr12:22287227-22287042 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 37

Conread position: 53-270
Cow position: chr12:46673277-46673489 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 55

Conread position: 53-282
Cow position: chr12:31841390-31841165 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 21

Conread position: 54-188
Cow position: chr12:34819187-34819323 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 54-235
Cow position: chr12:44559540-44559361 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 110, 21

Conread position: 54-367
Cow position: chr12:2805097-2805401 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 19

Conread position: 54-374
Cow position: chr12:18545820-18545506 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 21

Conread position: 55-241
Cow position: chr12:12579074-12579256 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 107, 20

Conread position: 55-287
Cow position: chr12:29779955-29780179 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 45

Conread position: 55-376
Cow position: chr12:8075740-8076060 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 37

Conread position: 55-386
Cow position: chr12:7919995-7919690 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 42

Conread position: 57-233
Cow position: chr12:33129215-33129041 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 78

Conread position: 58-202
Cow position: chr12:24182803-24182652 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 59-344
Cow position: chr12:1443795-1444082 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 105, 20

Conread position: 59-386
Cow position: chr12:17008151-17007823 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 60-385
Cow position: chr12:19697350-19697037 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 20, 71

Conread position: 60-386
Cow position: chr12:40868536-40868208 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 15

Conread position: 64-302
Cow position: chr12:11109710-11109478 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 90

Conread position: 65-202
Cow position: chr12:27639158-27639297 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 20

Conread position: 65-219
Cow position: chr12:25444865-25444708 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 10

Conread position: 65-318
Cow position: chr12:3076676-3076931 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 26

Conread position: 65-321
Cow position: chr12:30728295-30728551 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 93, 26

Conread position: 65-337
Cow position: chr12:12198961-12199232 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 54

Conread position: 65-360
Cow position: chr12:18076474-18076186 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 23

Conread position: 65-374
Cow position: chr12:10461941-10461642 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 34

Conread position: 65-382
Cow position: chr12:31060032-31060352 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 23

Conread position: 66-313
Cow position: chr12:42160607-42160856 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 93, 29

Conread position: 66-376
Cow position: chr12:47929152-47928849 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 9

Conread position: 67-245
Cow position: chr12:42421282-42421459 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 96, 21

Conread position: 67-315
Cow position: chr12:12938984-12939235 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 216

Conread position: 67-351
Cow position: chr12:35807619-35807335 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 93

Conread position: 68-206
Cow position: chr12:13066462-13066318 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 68-233
Cow position: chr12:6117840-6117677 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 132, 0

Conread position: 68-246
Cow position: chr12:5459201-5459027 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 20

Conread position: 68-280
Cow position: chr12:25177644-25177864 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 68-282
Cow position: chr12:42412276-42412490 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 95, 115

Conread position: 68-344
Cow position: chr12:22260884-22261148 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 137

Conread position: 69-272
Cow position: chr12:29161878-29162073 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 90, 30

Conread position: 71-316
Cow position: chr12:18769138-18769382 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 135

Conread position: 72-273
Cow position: chr12:28804929-28804730 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 72-341
Cow position: chr12:9465529-9465791 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 16

Conread position: 73-264
Cow position: chr12:44602438-44602249 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 73

Conread position: 73-302
Cow position: chr12:14523876-14523632 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 73-386
Cow position: chr12:19872360-19872065 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 16

Conread position: 75-306
Cow position: chr12:40270161-40270382 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 117

Conread position: 75-374
Cow position: chr12:9413851-9414130 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 75-384
Cow position: chr12:36568129-36568421 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 86, 117

Conread position: 75-386
Cow position: chr12:19420004-19420307 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 20

Conread position: 76-370
Cow position: chr12:35218474-35218764 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 121

Conread position: 79-325
Cow position: chr12:12017805-12017559 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 34

Conread position: 79-384
Cow position: chr12:17982546-17982258 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 33, 49

Conread position: 80-374
Cow position: chr12:40158312-40158600 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 105

Conread position: 80-385
Cow position: chr12:45555494-45555792 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 168, 55

Conread position: 82-305
Cow position: chr12:7657706-7657494 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 212, 86

Conread position: 83-310
Cow position: chr12:1848611-1848838 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 84-331
Cow position: chr12:9229564-9229805 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 27

Conread position: 86-385
Cow position: chr12:47486440-47486158 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 210, 34

Conread position: 87-364
Cow position: chr12:3212247-3211968 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 51, 120

Conread position: 87-382
Cow position: chr12:7311316-7311036 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 68

Conread position: 89-206
Cow position: chr12:31882264-31882148 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 89-246
Cow position: chr12:20357037-20357197 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 89-300
Cow position: chr12:4134588-4134375 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 127

Conread position: 90-246
Cow position: chr12:24180812-24180661 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 68, 13

Conread position: 90-306
Cow position: chr12:3615802-3615594 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 93-371
Cow position: chr12:46701118-46700839 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 93-374
Cow position: chr12:3880339-3880620 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 257

Conread position: 93-386
Cow position: chr12:25096131-25096425 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 137

Conread position: 93-386
Cow position: chr12:42061596-42061305 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 187

Conread position: 94-209
Cow position: chr12:32334095-32334211 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 96-384
Cow position: chr12:5863476-5863205 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 152, 52

Conread position: 100-221
Cow position: chr12:42477660-42477538 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 100-268
Cow position: chr12:27938819-27938656 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 106

Conread position: 102-374
Cow position: chr12:44273937-44274208 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 88, 223

Conread position: 106-230
Cow position: chr12:17636533-17636410 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 106-385
Cow position: chr12:41083969-41083677 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 163

Conread position: 107-254
Cow position: chr12:13156577-13156430 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 112-236
Cow position: chr12:16310330-16310203 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 112-316
Cow position: chr12:46635050-46635251 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 94

Conread position: 112-379
Cow position: chr12:16359773-16359504 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 108

Conread position: 113-297
Cow position: chr12:23154569-23154753 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 45, 14

Conread position: 115-304
Cow position: chr12:25805219-25805404 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 133, 88

Conread position: 120-386
Cow position: chr12:4593990-4593719 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 121-306
Cow position: chr12:16605767-16605942 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 121-386
Cow position: chr12:13964885-13965148 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 189, 83

Conread position: 127-374
Cow position: chr12:37123390-37123149 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 127-383
Cow position: chr12:7109071-7108812 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 82

Conread position: 127-383
Cow position: chr12:45160625-45160882 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 191

Show alignments to all cow chromosomes.