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Cow genome map

           
Conread name:
           
rspc012_m12.y1
        

               
Conread position:
               
1-312
               

               
Cow position:
               
chr25:6470312-6469988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr25:11956709-11956997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr25:28986770-28987108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
51, 141
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr25:18564398-18564599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 60
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr25:5474316-5474103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr25:28188038-28187816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr25:36017446-36017667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr25:36535528-36535233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 273
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr25:30816794-30817136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
6-284
               

               
Cow position:
               
chr25:23245093-23244818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
63, 203
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr25:6977895-6978165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
84, 65
               

               
Conread position:
               
10-293
               

               
Cow position:
               
chr25:26700944-26701215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 91
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr25:5834339-5834033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
10-315
               

               
Cow position:
               
chr25:8226013-8226324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
13-286
               

               
Cow position:
               
chr25:23779408-23779145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
13-293
               

               
Cow position:
               
chr25:1824182-1823896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 164
               

               
Conread position:
               
13-310
               

               
Cow position:
               
chr25:40904914-40904617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
21-226
               

               
Cow position:
               
chr25:36120427-36120629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
22-286
               

               
Cow position:
               
chr25:20008060-20008322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
22-293
               

               
Cow position:
               
chr25:17658533-17658807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 215
               

               
Conread position:
               
24-229
               

               
Cow position:
               
chr25:20447498-20447705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
24-229
               

               
Cow position:
               
chr25:26059430-26059624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
24-235
               

               
Cow position:
               
chr25:31230308-31230107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
24-266
               

               
Cow position:
               
chr25:16064817-16065050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 174
               

               
Conread position:
               
24-277
               

               
Cow position:
               
chr25:17342383-17342640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
24-279
               

               
Cow position:
               
chr25:16100512-16100767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
24-280
               

               
Cow position:
               
chr25:17474586-17474330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
24-283
               

               
Cow position:
               
chr25:36835500-36835247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
24-286
               

               
Cow position:
               
chr25:7216757-7217005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
24-291
               

               
Cow position:
               
chr25:36555762-36555506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 152
               

               
Conread position:
               
24-292
               

               
Cow position:
               
chr25:1763017-1763278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
24-292
               

               
Cow position:
               
chr25:7035483-7035754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr25:9002603-9002864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr25:26225098-26224841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr25:5846881-5846591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
24-311
               

               
Cow position:
               
chr25:448239-447948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 42
               

               
Conread position:
               
24-313
               

               
Cow position:
               
chr25:5920868-5921165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 255
               

               
Conread position:
               
24-315
               

               
Cow position:
               
chr25:433122-432836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
45, 241
               

               
Conread position:
               
24-319
               

               
Cow position:
               
chr25:12305203-12305501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
24-320
               

               
Cow position:
               
chr25:11585444-11585750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
24-324
               

               
Cow position:
               
chr25:35052694-35052392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
24-335
               

               
Cow position:
               
chr25:30618991-30619306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
45, 151
               

               
Conread position:
               
24-336
               

               
Cow position:
               
chr25:33663980-33663670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 166
               

               
Conread position:
               
24-345
               

               
Cow position:
               
chr25:8346075-8345751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
24-345
               

               
Cow position:
               
chr25:20069651-20069964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
24-347
               

               
Cow position:
               
chr25:33686754-33686433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
25-314
               

               
Cow position:
               
chr25:17119673-17119960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
26-189
               

               
Cow position:
               
chr25:37594333-37594501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
27-340
               

               
Cow position:
               
chr25:18201994-18201682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
31-284
               

               
Cow position:
               
chr25:13443479-13443221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
31-291
               

               
Cow position:
               
chr25:9269284-9269533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
31-291
               

               
Cow position:
               
chr25:11315840-11316095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
31-291
               

               
Cow position:
               
chr25:13272501-13272762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
31-292
               

               
Cow position:
               
chr25:1838172-1838437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
98, 183
               

               
Conread position:
               
31-293
               

               
Cow position:
               
chr25:38135681-38135948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
31-307
               

               
Cow position:
               
chr25:16921861-16921583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
31-339
               

               
Cow position:
               
chr25:26654844-26655132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
36-226
               

               
Cow position:
               
chr25:3145784-3145974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 142
               

               
Conread position:
               
36-229
               

               
Cow position:
               
chr25:14196799-14196995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 139
               

               
Conread position:
               
36-286
               

               
Cow position:
               
chr25:10504399-10504147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
36-291
               

               
Cow position:
               
chr25:14513051-14513299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 176
               

               
Conread position:
               
36-293
               

               
Cow position:
               
chr25:21893275-21893529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
29, 175
               

               
Conread position:
               
36-293
               

               
Cow position:
               
chr25:33555547-33555803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 86
               

               
Conread position:
               
36-314
               

               
Cow position:
               
chr25:12097777-12098049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
36-342
               

               
Cow position:
               
chr25:22203749-22203444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
37-241
               

               
Cow position:
               
chr25:22751068-22750861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 173
               

               
Conread position:
               
38-233
               

               
Cow position:
               
chr25:38421607-38421804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
38-283
               

               
Cow position:
               
chr25:7805905-7806153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
38-292
               

               
Cow position:
               
chr25:21183822-21184080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
38-326
               

               
Cow position:
               
chr25:17914724-17915005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
38-328
               

               
Cow position:
               
chr25:7816922-7817216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 240
               

               
Conread position:
               
42-293
               

               
Cow position:
               
chr25:23053504-23053758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
46-283
               

               
Cow position:
               
chr25:26306257-26306018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
46-297
               

               
Cow position:
               
chr25:17403433-17403675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
47-293
               

               
Cow position:
               
chr25:38957911-38958140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
47-300
               

               
Cow position:
               
chr25:17704694-17704942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
49-312
               

               
Cow position:
               
chr25:26072601-26072351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
52-291
               

               
Cow position:
               
chr25:26087474-26087711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
53-338
               

               
Cow position:
               
chr25:22346738-22347021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
54-275
               

               
Cow position:
               
chr25:24207460-24207235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
54-313
               

               
Cow position:
               
chr25:7726620-7726877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
67, 242
               

               
Conread position:
               
55-310
               

               
Cow position:
               
chr25:26338411-26338673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 230
               

               
Conread position:
               
55-314
               

               
Cow position:
               
chr25:13621396-13621146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
56-318
               

               
Cow position:
               
chr25:26136861-26136600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
57-292
               

               
Cow position:
               
chr25:536345-536109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
62-311
               

               
Cow position:
               
chr25:22154001-22154241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
63-291
               

               
Cow position:
               
chr25:17918941-17919170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
58, 188
               

               
Conread position:
               
66-229
               

               
Cow position:
               
chr25:4009063-4009229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
66-284
               

               
Cow position:
               
chr25:2624766-2624980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 76
               

               
Conread position:
               
66-286
               

               
Cow position:
               
chr25:6474117-6473888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
66-289
               

               
Cow position:
               
chr25:1840294-1840512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
66-292
               

               
Cow position:
               
chr25:33311357-33311129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
66-293
               

               
Cow position:
               
chr25:9990140-9989907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
66-293
               

               
Cow position:
               
chr25:21501077-21500847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 170
               

               
Conread position:
               
66-293
               

               
Cow position:
               
chr25:34242135-34241891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
66-308
               

               
Cow position:
               
chr25:19069862-19069622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
66-309
               

               
Cow position:
               
chr25:13222870-13223107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
66-315
               

               
Cow position:
               
chr25:12609313-12609560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
66-315
               

               
Cow position:
               
chr25:22178887-22179130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
66-318
               

               
Cow position:
               
chr25:33457702-33457944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
66-338
               

               
Cow position:
               
chr25:35109299-35109039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 147
               

               
Conread position:
               
66-341
               

               
Cow position:
               
chr25:7750422-7750687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
67-291
               

               
Cow position:
               
chr25:18288797-18288577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
67-293
               

               
Cow position:
               
chr25:4521866-4521646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 33
               

               
Conread position:
               
67-293
               

               
Cow position:
               
chr25:9843147-9843376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 33
               

               
Conread position:
               
67-315
               

               
Cow position:
               
chr25:28423114-28423365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
67-316
               

               
Cow position:
               
chr25:28597641-28597386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
67-337
               

               
Cow position:
               
chr25:9769387-9769658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 226
               

               
Conread position:
               
70-291
               

               
Cow position:
               
chr25:9615811-9616031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 150
               

               
Conread position:
               
70-292
               

               
Cow position:
               
chr25:21317454-21317224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
72-293
               

               
Cow position:
               
chr25:14106808-14107032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
72-319
               

               
Cow position:
               
chr25:23520052-23519820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
73-335
               

               
Cow position:
               
chr25:15566028-15565758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
74-231
               

               
Cow position:
               
chr25:15294774-15294932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
76-310
               

               
Cow position:
               
chr25:20085551-20085790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 139
               

               
Conread position:
               
79-229
               

               
Cow position:
               
chr25:12064031-12064181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
79-276
               

               
Cow position:
               
chr25:7380856-7380660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
80-309
               

               
Cow position:
               
chr25:33101621-33101402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
81-272
               

               
Cow position:
               
chr25:6718261-6718080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
81-311
               

               
Cow position:
               
chr25:8863407-8863171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
81-314
               

               
Cow position:
               
chr25:12260904-12260668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-292
               

               
Cow position:
               
chr25:8102656-8102862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 176
               

               
Conread position:
               
83-293
               

               
Cow position:
               
chr25:36873069-36872860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
86-306
               

               
Cow position:
               
chr25:31514171-31514392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
88-293
               

               
Cow position:
               
chr25:5807937-5808143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
97-279
               

               
Cow position:
               
chr25:18646586-18646761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
98-267
               

               
Cow position:
               
chr25:10138320-10138491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
98-279
               

               
Cow position:
               
chr25:23323492-23323678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
98-316
               

               
Cow position:
               
chr25:18491040-18491256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
98-333
               

               
Cow position:
               
chr25:36369821-36370059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
98-333
               

               
Cow position:
               
chr25:36375512-36375750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
99-291
               

               
Cow position:
               
chr25:2662402-2662587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
100-264
               

               
Cow position:
               
chr25:13049298-13049134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
105-248
               

               
Cow position:
               
chr25:6999227-6999083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
105-325
               

               
Cow position:
               
chr25:14215799-14216033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
106-291
               

               
Cow position:
               
chr25:15349895-15349716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
106-293
               

               
Cow position:
               
chr25:24669434-24669257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
106-304
               

               
Cow position:
               
chr25:13542976-13542777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
106-333
               

               
Cow position:
               
chr25:14164209-14164435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
187, 15
               

               
Conread position:
               
106-339
               

               
Cow position:
               
chr25:22373480-22373239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
107-225
               

               
Cow position:
               
chr25:38431740-38431621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
107-293
               

               
Cow position:
               
chr25:17724213-17724025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
107-293
               

               
Cow position:
               
chr25:24115305-24115120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
107-313
               

               
Cow position:
               
chr25:26164467-26164666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
107-346
               

               
Cow position:
               
chr25:15573401-15573628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
201, 10
               

               
Conread position:
               
108-326
               

               
Cow position:
               
chr25:4192017-4192230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr25:10611107-10610909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
109-314
               

               
Cow position:
               
chr25:7403328-7403120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
110-309
               

               
Cow position:
               
chr25:32750089-32750289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 160
               

               
Conread position:
               
110-310
               

               
Cow position:
               
chr25:5673432-5673235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 140
               

               
Conread position:
               
111-291
               

               
Cow position:
               
chr25:35802648-35802470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
6, 151
               

               
Conread position:
               
111-344
               

               
Cow position:
               
chr25:7311380-7311148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
112-279
               

               
Cow position:
               
chr25:8347670-8347834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
118-313
               

               
Cow position:
               
chr25:31705247-31705440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
119-291
               

               
Cow position:
               
chr25:4157222-4157054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
119-292
               

               
Cow position:
               
chr25:21443345-21443172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 123
               

               
Conread position:
               
119-313
               

               
Cow position:
               
chr25:3141527-3141719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
162, 87
               

               
Conread position:
               
119-319
               

               
Cow position:
               
chr25:7684874-7684676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
122-324
               

               
Cow position:
               
chr25:15305705-15305903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
123-286
               

               
Cow position:
               
chr25:7005540-7005703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-310
               

               
Cow position:
               
chr25:19832030-19832211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
123-313
               

               
Cow position:
               
chr25:14457177-14457367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-315
               

               
Cow position:
               
chr25:28662138-28662320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
123-334
               

               
Cow position:
               
chr25:32745366-32745565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
123-347
               

               
Cow position:
               
chr25:12773308-12773521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
124-313
               

               
Cow position:
               
chr25:30709320-30709129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
126-261
               

               
Cow position:
               
chr25:33111390-33111256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
128-288
               

               
Cow position:
               
chr25:26061694-26061534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-293
               

               
Cow position:
               
chr25:11057246-11057410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
128-347
               

               
Cow position:
               
chr25:1982949-1982736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
129-278
               

               
Cow position:
               
chr25:447869-447726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
129-284
               

               
Cow position:
               
chr25:11855515-11855361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
129-292
               

               
Cow position:
               
chr25:13304564-13304401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-309
               

               
Cow position:
               
chr25:21547191-21547364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
129-314
               

               
Cow position:
               
chr25:26989231-26989419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
129-332
               

               
Cow position:
               
chr25:20162456-20162253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
129-347
               

               
Cow position:
               
chr25:15999518-15999303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
129-347
               

               
Cow position:
               
chr25:33100609-33100818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
187, 83
               

               
Conread position:
               
131-309
               

               
Cow position:
               
chr25:8410998-8410822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
132-291
               

               
Cow position:
               
chr25:9641000-9640841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-292
               

               
Cow position:
               
chr25:6061398-6061555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
133-315
               

               
Cow position:
               
chr25:27520916-27520735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 109
               

               
Conread position:
               
133-328
               

               
Cow position:
               
chr25:31101888-31102081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
136-293
               

               
Cow position:
               
chr25:33272674-33272833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
139-265
               

               
Cow position:
               
chr25:18568173-18568047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-312
               

               
Cow position:
               
chr25:15423581-15423406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
139-314
               

               
Cow position:
               
chr25:21082363-21082190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
140-308
               

               
Cow position:
               
chr25:7185231-7185064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
141-284
               

               
Cow position:
               
chr25:22571004-22571145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
145-346
               

               
Cow position:
               
chr25:22119607-22119408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
142, 117
               

               
Conread position:
               
147-291
               

               
Cow position:
               
chr25:37981656-37981804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
147-319
               

               
Cow position:
               
chr25:25886546-25886371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
149-292
               

               
Cow position:
               
chr25:22642318-22642467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
151-291
               

               
Cow position:
               
chr25:37648838-37648975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
159-293
               

               
Cow position:
               
chr25:6812171-6812032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
162-293
               

               
Cow position:
               
chr25:12092681-12092814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
170-309
               

               
Cow position:
               
chr25:12817725-12817862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
180-311
               

               
Cow position:
               
chr25:7358585-7358451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
187-293
               

               
Cow position:
               
chr25:11096146-11096040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.