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Cow genome map

           
Conread name:
           
rspc012_m12.y1
        

               
Conread position:
               
1-333
               

               
Cow position:
               
chr3:69785748-69785411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 181
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr3:64196710-64197023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr3:49650271-49650481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr3:79884596-79884309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr3:72473799-72474118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 5
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr3:36672103-36671907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr3:49790923-49790695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr3:28898335-28898091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 68
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr3:72390972-72391234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr3:57754590-57754305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr3:5365564-5365849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
63, 58
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr3:23408465-23408180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr3:27697090-27696772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr3:23920542-23920224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr3:68145955-68145641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr3:65969048-65969393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 176
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr3:11640615-11640905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr3:54373972-54373684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr3:9663284-9662946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr3:12712029-12711797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 171
               

               
Conread position:
               
8-315
               

               
Cow position:
               
chr3:53909999-53910297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
8-331
               

               
Cow position:
               
chr3:60933304-60933634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 202
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr3:56582725-56583021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 180
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr3:17935051-17934829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 202
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr3:53046773-53046495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
10-293
               

               
Cow position:
               
chr3:39066224-39066502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr3:48459442-48459143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
10-323
               

               
Cow position:
               
chr3:1830683-1830370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
11-213
               

               
Cow position:
               
chr3:56943716-56943507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr3:1890220-1889938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
11-293
               

               
Cow position:
               
chr3:59702067-59702347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr3:7763549-7763845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
113, 135
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chr3:58767153-58767356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr3:15388108-15388393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
12-307
               

               
Cow position:
               
chr3:71478486-71478779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 169
               

               
Conread position:
               
12-310
               

               
Cow position:
               
chr3:23876889-23877184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 155
               

               
Conread position:
               
13-309
               

               
Cow position:
               
chr3:77188330-77188628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 192
               

               
Conread position:
               
13-315
               

               
Cow position:
               
chr3:49679026-49679329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
44, 198
               

               
Conread position:
               
14-282
               

               
Cow position:
               
chr3:48478137-48477881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
15-291
               

               
Cow position:
               
chr3:26904005-26904270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr3:3556438-3556720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
15-293
               

               
Cow position:
               
chr3:48362973-48363242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
155, 102
               

               
Conread position:
               
15-315
               

               
Cow position:
               
chr3:59604739-59605036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
16-291
               

               
Cow position:
               
chr3:45700704-45700973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 151
               

               
Conread position:
               
16-309
               

               
Cow position:
               
chr3:66631453-66631154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr3:81087734-81087437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
21-313
               

               
Cow position:
               
chr3:36375639-36375342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
22-258
               

               
Cow position:
               
chr3:57760403-57760638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
22-293
               

               
Cow position:
               
chr3:23804420-23804675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
22-293
               

               
Cow position:
               
chr3:37041318-37041589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
42, 191
               

               
Conread position:
               
22-315
               

               
Cow position:
               
chr3:55712335-55712628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
41, 201
               

               
Conread position:
               
22-315
               

               
Cow position:
               
chr3:58134784-58134492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 188
               

               
Conread position:
               
23-292
               

               
Cow position:
               
chr3:36240009-36240281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 247
               

               
Conread position:
               
23-309
               

               
Cow position:
               
chr3:26792378-26792643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
24-205
               

               
Cow position:
               
chr3:66884034-66883856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
24-210
               

               
Cow position:
               
chr3:4050100-4050286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
24-210
               

               
Cow position:
               
chr3:34270821-34271007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
24-215
               

               
Cow position:
               
chr3:26960684-26960490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chr3:79292735-79292929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 110
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chr3:33693723-33693922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
24-229
               

               
Cow position:
               
chr3:59621741-59621536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
24-230
               

               
Cow position:
               
chr3:53113079-53113288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr3:59588425-59588629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
179, 31
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr3:5366676-5366887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr3:6689907-6690140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
24-266
               

               
Cow position:
               
chr3:44101877-44102113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
24-278
               

               
Cow position:
               
chr3:49461024-49460768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
24-282
               

               
Cow position:
               
chr3:7566519-7566259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 194
               

               
Conread position:
               
24-282
               

               
Cow position:
               
chr3:74119534-74119268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 189
               

               
Conread position:
               
24-283
               

               
Cow position:
               
chr3:59000846-59000600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
24-283
               

               
Cow position:
               
chr3:75238363-75238623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
24-286
               

               
Cow position:
               
chr3:51234190-51233938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
24-289
               

               
Cow position:
               
chr3:56476584-56476843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
24-291
               

               
Cow position:
               
chr3:22221225-22221497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
24-291
               

               
Cow position:
               
chr3:23471561-23471292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 221
               

               
Conread position:
               
24-291
               

               
Cow position:
               
chr3:54100815-54100542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
24-292
               

               
Cow position:
               
chr3:15954181-15953910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
24-292
               

               
Cow position:
               
chr3:51578415-51578152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr3:14552782-14553045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr3:15443824-15443553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr3:35056073-35055803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 155
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr3:48252790-48253052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr3:65413374-65413093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 150
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr3:67520266-67520003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 184
               

               
Conread position:
               
24-293
               

               
Cow position:
               
chr3:75050714-75050450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
24-306
               

               
Cow position:
               
chr3:15153594-15153875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr3:18459615-18459349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr3:31225344-31225610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
24-309
               

               
Cow position:
               
chr3:49382853-49383160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
24-309
               

               
Cow position:
               
chr3:72342150-72342433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 273
               

               
Conread position:
               
24-309
               

               
Cow position:
               
chr3:75687532-75687248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 167
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr3:24468473-24468195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
24-311
               

               
Cow position:
               
chr3:18059607-18059897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
24-311
               

               
Cow position:
               
chr3:28908298-28908025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 182
               

               
Conread position:
               
24-312
               

               
Cow position:
               
chr3:14465807-14465526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 184
               

               
Conread position:
               
24-312
               

               
Cow position:
               
chr3:29813150-29813418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
24-312
               

               
Cow position:
               
chr3:58318048-58317752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 157
               

               
Conread position:
               
24-314
               

               
Cow position:
               
chr3:53318310-53318604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
24-314
               

               
Cow position:
               
chr3:53875856-53875570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
24-314
               

               
Cow position:
               
chr3:71238062-71238340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
24-315
               

               
Cow position:
               
chr3:53270735-53271027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 277
               

               
Conread position:
               
24-315
               

               
Cow position:
               
chr3:74234096-74234379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
24-316
               

               
Cow position:
               
chr3:55318997-55318700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
24-322
               

               
Cow position:
               
chr3:20802717-20802438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
24-323
               

               
Cow position:
               
chr3:18144216-18143905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 255
               

               
Conread position:
               
24-324
               

               
Cow position:
               
chr3:3656419-3656720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 241
               

               
Conread position:
               
24-324
               

               
Cow position:
               
chr3:71497238-71496926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 282
               

               
Conread position:
               
24-326
               

               
Cow position:
               
chr3:59034943-59035250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
24-334
               

               
Cow position:
               
chr3:83727342-83727043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
24-337
               

               
Cow position:
               
chr3:17058635-17058337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
24-338
               

               
Cow position:
               
chr3:48241522-48241816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
24-340
               

               
Cow position:
               
chr3:31309448-31309136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 239
               

               
Conread position:
               
24-340
               

               
Cow position:
               
chr3:65058607-65058915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
24-343
               

               
Cow position:
               
chr3:4319617-4319947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
24-344
               

               
Cow position:
               
chr3:52652176-52651847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
24-347
               

               
Cow position:
               
chr3:3985233-3985547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
25-205
               

               
Cow position:
               
chr3:37599520-37599340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
25-218
               

               
Cow position:
               
chr3:57624371-57624565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 150
               

               
Conread position:
               
26-234
               

               
Cow position:
               
chr3:74900731-74900522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
26-293
               

               
Cow position:
               
chr3:70334056-70333796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
26-347
               

               
Cow position:
               
chr3:2680425-2680755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
231, 39
               

               
Conread position:
               
28-292
               

               
Cow position:
               
chr3:59945035-59945299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
28-314
               

               
Cow position:
               
chr3:68586930-68587214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
29-279
               

               
Cow position:
               
chr3:74079728-74079479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
31-195
               

               
Cow position:
               
chr3:81277558-81277390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
31-208
               

               
Cow position:
               
chr3:15228908-15228732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
31-223
               

               
Cow position:
               
chr3:72503986-72503790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
31-229
               

               
Cow position:
               
chr3:10103959-10104152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
31-248
               

               
Cow position:
               
chr3:73708960-73709175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
31-279
               

               
Cow position:
               
chr3:31350193-31349949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
31-283
               

               
Cow position:
               
chr3:73395034-73395278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
31-283
               

               
Cow position:
               
chr3:76268066-76267811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 187
               

               
Conread position:
               
31-283
               

               
Cow position:
               
chr3:84250632-84250386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
31-291
               

               
Cow position:
               
chr3:83215172-83215440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 147
               

               
Conread position:
               
31-308
               

               
Cow position:
               
chr3:4268670-4268386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 178
               

               
Conread position:
               
31-310
               

               
Cow position:
               
chr3:75778149-75777876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 178
               

               
Conread position:
               
31-315
               

               
Cow position:
               
chr3:59040481-59040762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
31-317
               

               
Cow position:
               
chr3:21867124-21866845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
31-318
               

               
Cow position:
               
chr3:57577610-57577891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
31-326
               

               
Cow position:
               
chr3:55970419-55970722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 160
               

               
Conread position:
               
31-328
               

               
Cow position:
               
chr3:14601799-14601503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
31-336
               

               
Cow position:
               
chr3:73837804-73837505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
32-339
               

               
Cow position:
               
chr3:18067049-18067345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
36-205
               

               
Cow position:
               
chr3:83928165-83928334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
36-266
               

               
Cow position:
               
chr3:55010246-55010025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
36-285
               

               
Cow position:
               
chr3:73820453-73820200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
36-291
               

               
Cow position:
               
chr3:18686825-18687072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
36-293
               

               
Cow position:
               
chr3:17456350-17456094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
36-293
               

               
Cow position:
               
chr3:53221931-53222185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
36-307
               

               
Cow position:
               
chr3:3889653-3889389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr3:14725220-14725505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 162
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr3:23169149-23168880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
36-315
               

               
Cow position:
               
chr3:14801659-14801943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 230
               

               
Conread position:
               
36-315
               

               
Cow position:
               
chr3:34871482-34871758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
36-315
               

               
Cow position:
               
chr3:56678436-56678155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 152
               

               
Conread position:
               
36-321
               

               
Cow position:
               
chr3:3316895-3316607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
36-345
               

               
Cow position:
               
chr3:39661538-39661228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
37-279
               

               
Cow position:
               
chr3:11987247-11987487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 177
               

               
Conread position:
               
37-283
               

               
Cow position:
               
chr3:40145385-40145630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
37-291
               

               
Cow position:
               
chr3:59474038-59474291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
37-293
               

               
Cow position:
               
chr3:3032324-3032582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
37-293
               

               
Cow position:
               
chr3:63844847-63845113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
37-320
               

               
Cow position:
               
chr3:23203317-23203030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
37-325
               

               
Cow position:
               
chr3:53739267-53738982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
37-344
               

               
Cow position:
               
chr3:51033285-51033592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
38-286
               

               
Cow position:
               
chr3:5707295-5707044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
38-310
               

               
Cow position:
               
chr3:30463250-30462989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
38-313
               

               
Cow position:
               
chr3:21015041-21014765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 224
               

               
Conread position:
               
38-314
               

               
Cow position:
               
chr3:67698198-67698475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
38-323
               

               
Cow position:
               
chr3:73961780-73961492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 208
               

               
Conread position:
               
38-325
               

               
Cow position:
               
chr3:55094314-55094029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 174
               

               
Conread position:
               
38-328
               

               
Cow position:
               
chr3:210236-210524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 258
               

               
Conread position:
               
38-341
               

               
Cow position:
               
chr3:36160276-36159982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
39-312
               

               
Cow position:
               
chr3:27976606-27976330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
29, 183
               

               
Conread position:
               
40-268
               

               
Cow position:
               
chr3:74134621-74134855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
42-291
               

               
Cow position:
               
chr3:14546924-14547170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
42-314
               

               
Cow position:
               
chr3:29334492-29334217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
79, 249
               

               
Conread position:
               
43-291
               

               
Cow position:
               
chr3:8061050-8061291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
43-309
               

               
Cow position:
               
chr3:50615345-50615076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
43-311
               

               
Cow position:
               
chr3:54551790-54551518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
46-293
               

               
Cow position:
               
chr3:61894239-61894010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
47-279
               

               
Cow position:
               
chr3:3275525-3275754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
47-310
               

               
Cow position:
               
chr3:35074811-35075061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
47-327
               

               
Cow position:
               
chr3:35624619-35624336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 143
               

               
Conread position:
               
47-336
               

               
Cow position:
               
chr3:81471168-81470861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
48-325
               

               
Cow position:
               
chr3:39248093-39247826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
49-280
               

               
Cow position:
               
chr3:2483932-2484162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 167
               

               
Conread position:
               
50-325
               

               
Cow position:
               
chr3:2637859-2638136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
52-279
               

               
Cow position:
               
chr3:56704387-56704151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 120
               

               
Conread position:
               
52-291
               

               
Cow position:
               
chr3:54067731-54067965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr3:56949151-56948904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
53-317
               

               
Cow position:
               
chr3:26338092-26337820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 258
               

               
Conread position:
               
53-347
               

               
Cow position:
               
chr3:20841938-20841651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
54-293
               

               
Cow position:
               
chr3:23105425-23105192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
54-293
               

               
Cow position:
               
chr3:54506644-54506879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
54-309
               

               
Cow position:
               
chr3:38035654-38035401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 123
               

               
Conread position:
               
54-315
               

               
Cow position:
               
chr3:26992506-26992771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
55-270
               

               
Cow position:
               
chr3:25945028-25945245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
55-291
               

               
Cow position:
               
chr3:16752322-16752083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
55-291
               

               
Cow position:
               
chr3:48900393-48900159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
55-347
               

               
Cow position:
               
chr3:46792321-46792614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 159
               

               
Conread position:
               
56-306
               

               
Cow position:
               
chr3:8182013-8181763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
58-315
               

               
Cow position:
               
chr3:2518598-2518345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
58-346
               

               
Cow position:
               
chr3:45823083-45822804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 218
               

               
Conread position:
               
63-205
               

               
Cow position:
               
chr3:5249432-5249294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
63-266
               

               
Cow position:
               
chr3:77365344-77365141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
63-272
               

               
Cow position:
               
chr3:33048449-33048240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 139
               

               
Conread position:
               
65-317
               

               
Cow position:
               
chr3:9026137-9025888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
65-345
               

               
Cow position:
               
chr3:11229419-11229139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
66-228
               

               
Cow position:
               
chr3:57877515-57877677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
66-232
               

               
Cow position:
               
chr3:84157496-84157330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
66-258
               

               
Cow position:
               
chr3:38783554-38783746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 158
               

               
Conread position:
               
66-279
               

               
Cow position:
               
chr3:79196707-79196922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 142
               

               
Conread position:
               
66-283
               

               
Cow position:
               
chr3:66900785-66900564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 211
               

               
Conread position:
               
66-285
               

               
Cow position:
               
chr3:74787380-74787590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 7
               

               
Conread position:
               
66-292
               

               
Cow position:
               
chr3:2025144-2025375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
66-292
               

               
Cow position:
               
chr3:14770934-14770714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 138
               

               
Conread position:
               
66-292
               

               
Cow position:
               
chr3:48468121-48468348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
17, 13
               

               
Conread position:
               
66-292
               

               
Cow position:
               
chr3:52487563-52487801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 13
               

               
Conread position:
               
66-292
               

               
Cow position:
               
chr3:84174249-84174476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
66-293
               

               
Cow position:
               
chr3:20997054-20996829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
66-293
               

               
Cow position:
               
chr3:79272626-79272403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 151
               

               
Conread position:
               
66-310
               

               
Cow position:
               
chr3:10958292-10958057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
66-313
               

               
Cow position:
               
chr3:40213085-40212840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
66-314
               

               
Cow position:
               
chr3:65236972-65237218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
66-319
               

               
Cow position:
               
chr3:29946334-29946581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
5, 132
               

               
Conread position:
               
66-320
               

               
Cow position:
               
chr3:19792853-19793098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
66-334
               

               
Cow position:
               
chr3:39996943-39996681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
55, 157
               

               
Conread position:
               
66-341
               

               
Cow position:
               
chr3:51609236-51608965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
67-270
               

               
Cow position:
               
chr3:46266150-46266353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
67-292
               

               
Cow position:
               
chr3:45211250-45211476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
67-293
               

               
Cow position:
               
chr3:23132220-23131995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 33
               

               
Conread position:
               
67-293
               

               
Cow position:
               
chr3:43233455-43233676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
67-306
               

               
Cow position:
               
chr3:33252940-33252706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
54, 149
               

               
Conread position:
               
67-308
               

               
Cow position:
               
chr3:38248600-38248845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
67-309
               

               
Cow position:
               
chr3:12090622-12090866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
67-310
               

               
Cow position:
               
chr3:16107408-16107185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
68-292
               

               
Cow position:
               
chr3:15950963-15950745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
68-308
               

               
Cow position:
               
chr3:11281716-11281956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 232
               

               
Conread position:
               
68-309
               

               
Cow position:
               
chr3:17134284-17134520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
68-314
               

               
Cow position:
               
chr3:27274481-27274720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
68-315
               

               
Cow position:
               
chr3:47753176-47753432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr3:81923849-81923599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 174
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr3:22165465-22165206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
68-346
               

               
Cow position:
               
chr3:19585814-19586095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
69-292
               

               
Cow position:
               
chr3:49996772-49996545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
69-293
               

               
Cow position:
               
chr3:2648559-2648335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
69-307
               

               
Cow position:
               
chr3:68303267-68303505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
69-313
               

               
Cow position:
               
chr3:50768630-50768873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 139
               

               
Conread position:
               
69-320
               

               
Cow position:
               
chr3:1011437-1011691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
52, 126
               

               
Conread position:
               
70-313
               

               
Cow position:
               
chr3:13380323-13380087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr3:83889199-83889439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
223, 0
               

               
Conread position:
               
70-322
               

               
Cow position:
               
chr3:29891457-29891206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 224
               

               
Conread position:
               
72-291
               

               
Cow position:
               
chr3:52456872-52457080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
73-283
               

               
Cow position:
               
chr3:28903968-28903755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 180
               

               
Conread position:
               
73-283
               

               
Cow position:
               
chr3:82366084-82366292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
73-313
               

               
Cow position:
               
chr3:27083094-27082848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
39, 149
               

               
Conread position:
               
74-293
               

               
Cow position:
               
chr3:15973522-15973743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
75-282
               

               
Cow position:
               
chr3:423319-423533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
75-316
               

               
Cow position:
               
chr3:80709911-80709667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
76-306
               

               
Cow position:
               
chr3:39912731-39912501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
78-293
               

               
Cow position:
               
chr3:70762160-70761950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
79-291
               

               
Cow position:
               
chr3:5305759-5305974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
79-291
               

               
Cow position:
               
chr3:49482756-49482543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
79-308
               

               
Cow position:
               
chr3:22889056-22888826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 163
               

               
Conread position:
               
79-315
               

               
Cow position:
               
chr3:41863585-41863818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
79-315
               

               
Cow position:
               
chr3:75107735-75107965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
79-337
               

               
Cow position:
               
chr3:69144654-69144908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 98
               

               
Conread position:
               
80-280
               

               
Cow position:
               
chr3:8814150-8813941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
80-313
               

               
Cow position:
               
chr3:54903527-54903762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
80-347
               

               
Cow position:
               
chr3:84137853-84137588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 135
               

               
Conread position:
               
81-258
               

               
Cow position:
               
chr3:26982021-26982196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
81-272
               

               
Cow position:
               
chr3:18185038-18185229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
81-289
               

               
Cow position:
               
chr3:3584676-3584883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
81-291
               

               
Cow position:
               
chr3:9120808-9121013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
81-291
               

               
Cow position:
               
chr3:84928066-84928278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
81-292
               

               
Cow position:
               
chr3:6728367-6728149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
81-292
               

               
Cow position:
               
chr3:45279429-45279641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
81-292
               

               
Cow position:
               
chr3:83770694-83770906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
81-312
               

               
Cow position:
               
chr3:55177783-55177560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
81-313
               

               
Cow position:
               
chr3:54050062-54049833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
81-320
               

               
Cow position:
               
chr3:73525275-73525034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
81-336
               

               
Cow position:
               
chr3:58452011-58452257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
81-346
               

               
Cow position:
               
chr3:41129674-41129937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 89
               

               
Conread position:
               
82-316
               

               
Cow position:
               
chr3:13241112-13240876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
83-293
               

               
Cow position:
               
chr3:8591407-8591195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
83-293
               

               
Cow position:
               
chr3:28902794-28902589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
84-347
               

               
Cow position:
               
chr3:82084784-82085052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 190
               

               
Conread position:
               
86-312
               

               
Cow position:
               
chr3:44959910-44960140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-304
               

               
Cow position:
               
chr3:20021238-20021452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
87-346
               

               
Cow position:
               
chr3:4120397-4120142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
88-290
               

               
Cow position:
               
chr3:32317861-32317659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
88-313
               

               
Cow position:
               
chr3:49363080-49363297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
90-318
               

               
Cow position:
               
chr3:7381857-7381633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
201, 31
               

               
Conread position:
               
92-292
               

               
Cow position:
               
chr3:29234706-29234506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
96-292
               

               
Cow position:
               
chr3:11254188-11253993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
96-292
               

               
Cow position:
               
chr3:58010849-58010662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
96-314
               

               
Cow position:
               
chr3:59588620-59588840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
96-315
               

               
Cow position:
               
chr3:23735107-23734892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
97-286
               

               
Cow position:
               
chr3:62312775-62312964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
97-286
               

               
Cow position:
               
chr3:62370034-62370223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
98-229
               

               
Cow position:
               
chr3:78201590-78201723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
98-289
               

               
Cow position:
               
chr3:77171295-77171487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
98-292
               

               
Cow position:
               
chr3:46559735-46559544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
98-292
               

               
Cow position:
               
chr3:79339599-79339404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr3:985994-986188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr3:13882541-13882345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr3:59271813-59272004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr3:59947645-59947841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr3:81666779-81666970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
98-307
               

               
Cow position:
               
chr3:61024043-61023834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
23, 190
               

               
Conread position:
               
98-309
               

               
Cow position:
               
chr3:72027618-72027828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
98-313
               

               
Cow position:
               
chr3:43389148-43388934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 207
               

               
Conread position:
               
98-314
               

               
Cow position:
               
chr3:76056305-76056093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
98-325
               

               
Cow position:
               
chr3:9718271-9718046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
98-346
               

               
Cow position:
               
chr3:44534551-44534309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
98-347
               

               
Cow position:
               
chr3:70402624-70402866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
99-293
               

               
Cow position:
               
chr3:59681923-59681734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
99-311
               

               
Cow position:
               
chr3:48483159-48483366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 164
               

               
Conread position:
               
99-315
               

               
Cow position:
               
chr3:75966800-75966586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
99-334
               

               
Cow position:
               
chr3:45314325-45314571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
100-289
               

               
Cow position:
               
chr3:70756660-70756470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
100-292
               

               
Cow position:
               
chr3:47199145-47198954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
100-293
               

               
Cow position:
               
chr3:4271354-4271538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
100-309
               

               
Cow position:
               
chr3:32376796-32377004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
191, 127
               

               
Conread position:
               
100-323
               

               
Cow position:
               
chr3:36412106-36411891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 172
               

               
Conread position:
               
101-309
               

               
Cow position:
               
chr3:68289663-68289872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
105-309
               

               
Cow position:
               
chr3:24220588-24220390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
187, 8
               

               
Conread position:
               
106-276
               

               
Cow position:
               
chr3:70431416-70431590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
106-292
               

               
Cow position:
               
chr3:25702354-25702159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
106-292
               

               
Cow position:
               
chr3:41366722-41366528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr3:12178044-12178250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr3:64800562-64800359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
106-312
               

               
Cow position:
               
chr3:63860623-63860418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
106-316
               

               
Cow position:
               
chr3:25735918-25735709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 194
               

               
Conread position:
               
106-324
               

               
Cow position:
               
chr3:21050684-21050469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
106-329
               

               
Cow position:
               
chr3:76168644-76168424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 194
               

               
Conread position:
               
106-340
               

               
Cow position:
               
chr3:27286506-27286735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 108
               

               
Conread position:
               
107-286
               

               
Cow position:
               
chr3:26603563-26603380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
107-288
               

               
Cow position:
               
chr3:69205007-69205184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
107-291
               

               
Cow position:
               
chr3:31361416-31361594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
107-291
               

               
Cow position:
               
chr3:78071802-78071621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
107-292
               

               
Cow position:
               
chr3:59317691-59317872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
107-293
               

               
Cow position:
               
chr3:35802952-35802763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
107-293
               

               
Cow position:
               
chr3:44207889-44207704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
107-309
               

               
Cow position:
               
chr3:54350452-54350247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 197
               

               
Conread position:
               
107-313
               

               
Cow position:
               
chr3:78258766-78258556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
107-340
               

               
Cow position:
               
chr3:65022283-65022526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
110-291
               

               
Cow position:
               
chr3:53150323-53150504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
111-291
               

               
Cow position:
               
chr3:62186144-62186329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
111-292
               

               
Cow position:
               
chr3:55730476-55730294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
111-293
               

               
Cow position:
               
chr3:76134021-76133838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
111-307
               

               
Cow position:
               
chr3:80958518-80958322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr3:19044773-19044583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
111-346
               

               
Cow position:
               
chr3:15859386-15859158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
116-292
               

               
Cow position:
               
chr3:8974843-8975019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-292
               

               
Cow position:
               
chr3:62998992-62998823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
117-315
               

               
Cow position:
               
chr3:57704336-57704527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
119-292
               

               
Cow position:
               
chr3:8775320-8775492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
119-292
               

               
Cow position:
               
chr3:15795221-15795394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
168, 73
               

               
Conread position:
               
119-292
               

               
Cow position:
               
chr3:80733851-80733678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-302
               

               
Cow position:
               
chr3:35883933-35883750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-312
               

               
Cow position:
               
chr3:17531736-17531550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
119-314
               

               
Cow position:
               
chr3:11027276-11027467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
119-314
               

               
Cow position:
               
chr3:79398144-79398341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
119-315
               

               
Cow position:
               
chr3:28676198-28676384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
121-293
               

               
Cow position:
               
chr3:55106145-55105973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr3:3453584-3453753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-283
               

               
Cow position:
               
chr3:1028642-1028484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
123-289
               

               
Cow position:
               
chr3:80910601-80910766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
123-293
               

               
Cow position:
               
chr3:80173005-80173172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
123-305
               

               
Cow position:
               
chr3:11023450-11023639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
123-310
               

               
Cow position:
               
chr3:59810423-59810238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
123-314
               

               
Cow position:
               
chr3:58614462-58614656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 182
               

               
Conread position:
               
123-314
               

               
Cow position:
               
chr3:60370988-60371174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
123-314
               

               
Cow position:
               
chr3:83934731-83934916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 52
               

               
Conread position:
               
123-315
               

               
Cow position:
               
chr3:635183-635374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
170, 79
               

               
Conread position:
               
123-315
               

               
Cow position:
               
chr3:18700105-18699911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
123-324
               

               
Cow position:
               
chr3:4194402-4194201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 78
               

               
Conread position:
               
123-330
               

               
Cow position:
               
chr3:21694230-21694434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
79, 118
               

               
Conread position:
               
123-345
               

               
Cow position:
               
chr3:8147520-8147302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
124-293
               

               
Cow position:
               
chr3:77098816-77098651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
126-282
               

               
Cow position:
               
chr3:68624226-68624381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
44, 48
               

               
Conread position:
               
126-291
               

               
Cow position:
               
chr3:74515329-74515165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
128-238
               

               
Cow position:
               
chr3:28415773-28415882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
128-283
               

               
Cow position:
               
chr3:57706746-57706589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
128-291
               

               
Cow position:
               
chr3:24852586-24852418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
128-293
               

               
Cow position:
               
chr3:15955532-15955697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-310
               

               
Cow position:
               
chr3:62789944-62789759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
128-313
               

               
Cow position:
               
chr3:79893487-79893303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
128-315
               

               
Cow position:
               
chr3:3164099-3163918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
128-316
               

               
Cow position:
               
chr3:2016446-2016626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
128-320
               

               
Cow position:
               
chr3:2538251-2538436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
70, 74
               

               
Conread position:
               
128-345
               

               
Cow position:
               
chr3:15160531-15160740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
129-275
               

               
Cow position:
               
chr3:49733041-49732895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
129-284
               

               
Cow position:
               
chr3:5003645-5003796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
129-286
               

               
Cow position:
               
chr3:83199523-83199679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
129-289
               

               
Cow position:
               
chr3:67942524-67942364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-293
               

               
Cow position:
               
chr3:37641338-37641499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
129-309
               

               
Cow position:
               
chr3:63201931-63202114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
129-312
               

               
Cow position:
               
chr3:51153057-51153236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
129-314
               

               
Cow position:
               
chr3:35079496-35079309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
129-314
               

               
Cow position:
               
chr3:37851508-37851691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
129-315
               

               
Cow position:
               
chr3:37575567-37575382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
129-315
               

               
Cow position:
               
chr3:76300783-76300967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
129-318
               

               
Cow position:
               
chr3:47417560-47417370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
129-334
               

               
Cow position:
               
chr3:42589110-42589317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 134
               

               
Conread position:
               
129-338
               

               
Cow position:
               
chr3:81616441-81616235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
129-342
               

               
Cow position:
               
chr3:63069354-63069133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
130-292
               

               
Cow position:
               
chr3:82175520-82175681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
130-314
               

               
Cow position:
               
chr3:57790626-57790802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
150, 72
               

               
Conread position:
               
130-315
               

               
Cow position:
               
chr3:53428904-53428722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
164, 89
               

               
Conread position:
               
130-315
               

               
Cow position:
               
chr3:82425066-82424886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
130-340
               

               
Cow position:
               
chr3:84807315-84807104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
151, 131
               

               
Conread position:
               
131-269
               

               
Cow position:
               
chr3:17039626-17039766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
131-287
               

               
Cow position:
               
chr3:56754519-56754368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
131-293
               

               
Cow position:
               
chr3:49787572-49787729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
131-293
               

               
Cow position:
               
chr3:64910082-64909922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
131-303
               

               
Cow position:
               
chr3:20911396-20911228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
131-315
               

               
Cow position:
               
chr3:14211969-14211788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
160, 84
               

               
Conread position:
               
132-291
               

               
Cow position:
               
chr3:4931826-4931659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
132-322
               

               
Cow position:
               
chr3:16710785-16710594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
132-331
               

               
Cow position:
               
chr3:70319790-70319587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
70, 145
               

               
Conread position:
               
132-344
               

               
Cow position:
               
chr3:3011161-3011369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
133-281
               

               
Cow position:
               
chr3:32361989-32361846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
133-282
               

               
Cow position:
               
chr3:11029894-11029742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr3:28643427-28643575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
133-312
               

               
Cow position:
               
chr3:48300445-48300268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
133-313
               

               
Cow position:
               
chr3:33460593-33460410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 169
               

               
Conread position:
               
133-315
               

               
Cow position:
               
chr3:59926636-59926829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-321
               

               
Cow position:
               
chr3:53604730-53604545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
133-329
               

               
Cow position:
               
chr3:48772221-48772018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
134-311
               

               
Cow position:
               
chr3:83705521-83705341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
135-293
               

               
Cow position:
               
chr3:2636912-2636761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr3:48537381-48537537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
136-329
               

               
Cow position:
               
chr3:27368650-27368459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 160
               

               
Conread position:
               
136-335
               

               
Cow position:
               
chr3:42483945-42484138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
138-293
               

               
Cow position:
               
chr3:44218786-44218941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-291
               

               
Cow position:
               
chr3:19641080-19641236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 35
               

               
Conread position:
               
139-291
               

               
Cow position:
               
chr3:58562715-58562872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
139-293
               

               
Cow position:
               
chr3:22078097-22078251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-308
               

               
Cow position:
               
chr3:18764123-18764292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
139-313
               

               
Cow position:
               
chr3:22899711-22899536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
154, 68
               

               
Conread position:
               
139-340
               

               
Cow position:
               
chr3:43016429-43016220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
68, 197
               

               
Conread position:
               
139-341
               

               
Cow position:
               
chr3:74127487-74127280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
140-290
               

               
Cow position:
               
chr3:20066127-20065977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
140-293
               

               
Cow position:
               
chr3:621457-621614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
140-293
               

               
Cow position:
               
chr3:73925015-73924867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
142-313
               

               
Cow position:
               
chr3:61171344-61171175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 122
               

               
Conread position:
               
143-315
               

               
Cow position:
               
chr3:53836681-53836513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
144-338
               

               
Cow position:
               
chr3:58497684-58497875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
145-293
               

               
Cow position:
               
chr3:56932472-56932627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
146-292
               

               
Cow position:
               
chr3:66354707-66354853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
146-292
               

               
Cow position:
               
chr3:78115564-78115418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
147-280
               

               
Cow position:
               
chr3:6547453-6547586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
147-290
               

               
Cow position:
               
chr3:20888633-20888491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-309
               

               
Cow position:
               
chr3:12870518-12870359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
147-314
               

               
Cow position:
               
chr3:73410316-73410479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
149-292
               

               
Cow position:
               
chr3:29943888-29944032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
150-311
               

               
Cow position:
               
chr3:35585864-35586021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
151-312
               

               
Cow position:
               
chr3:18301537-18301376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-283
               

               
Cow position:
               
chr3:72291267-72291397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
152-286
               

               
Cow position:
               
chr3:14589197-14589064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
153-314
               

               
Cow position:
               
chr3:7408471-7408629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
154-309
               

               
Cow position:
               
chr3:56972226-56972390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
156-346
               

               
Cow position:
               
chr3:76300588-76300772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
159-292
               

               
Cow position:
               
chr3:55973036-55972911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
159-293
               

               
Cow position:
               
chr3:72626704-72626569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
162-283
               

               
Cow position:
               
chr3:76138502-76138622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
163-347
               

               
Cow position:
               
chr3:79316734-79316917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
164-342
               

               
Cow position:
               
chr3:84601716-84601536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
171-314
               

               
Cow position:
               
chr3:23733418-23733273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
174-313
               

               
Cow position:
               
chr3:75975025-75974884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
178-315
               

               
Cow position:
               
chr3:66563843-66563980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
180-315
               

               
Cow position:
               
chr3:26373971-26373837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
180-316
               

               
Cow position:
               
chr3:70632207-70632340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
182-292
               

               
Cow position:
               
chr3:44415509-44415399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-306
               

               
Cow position:
               
chr3:52147379-52147256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
182-315
               

               
Cow position:
               
chr3:17952657-17952791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
182-315
               

               
Cow position:
               
chr3:42933545-42933681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
189-343
               

               
Cow position:
               
chr3:56023093-56023249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
191-293
               

               
Cow position:
               
chr3:29385940-29386042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.