Cow genome map
| Conread name: | rspc012_m12.y1 |
| Conread position: | 1-289 |
| Cow position: | chr5:71845985-71845706 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 69, 123 |
| Conread position: | 1-325 |
| Cow position: | chr5:43604075-43604395 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 65 |
| Conread position: | 2-315 |
| Cow position: | chr5:41935720-41935411 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 3-283 |
| Cow position: | chr5:48867524-48867256 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 3-316 |
| Cow position: | chr5:17999558-17999248 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 67, 119 |
| Conread position: | 4-283 |
| Cow position: | chr5:34976908-34976625 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-283 |
| Cow position: | chr5:17063154-17062865 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 58, 92 |
| Conread position: | 5-308 |
| Cow position: | chr5:12901853-12902159 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 5-308 |
| Cow position: | chr5:57756095-57755795 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 5-314 |
| Cow position: | chr5:33273628-33273938 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 5-315 |
| Cow position: | chr5:53855634-53855961 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 52, 282 |
| Conread position: | 5-325 |
| Cow position: | chr5:5938262-5938574 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 5-336 |
| Cow position: | chr5:54311271-54311627 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-346 |
| Cow position: | chr5:20843464-20843124 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 6-229 |
| Cow position: | chr5:9090086-9089868 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 6-309 |
| Cow position: | chr5:42064139-42064448 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 7-284 |
| Cow position: | chr5:64168299-64168022 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 8-273 |
| Cow position: | chr5:63987511-63987241 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 135 |
| Conread position: | 8-340 |
| Cow position: | chr5:32394540-32394868 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 10-228 |
| Cow position: | chr5:34887259-34887034 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 11-310 |
| Cow position: | chr5:55756482-55756172 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 12-297 |
| Cow position: | chr5:12761169-12760892 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 12-315 |
| Cow position: | chr5:50575728-50576012 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 106, 152 |
| Conread position: | 13-279 |
| Cow position: | chr5:26097237-26097500 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 15-229 |
| Cow position: | chr5:26477074-26476856 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 15-292 |
| Cow position: | chr5:37255392-37255110 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 54, 233 |
| Conread position: | 19-261 |
| Cow position: | chr5:453509-453743 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 60 |
| Conread position: | 22-309 |
| Cow position: | chr5:66581918-66582209 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 22-318 |
| Cow position: | chr5:3771801-3772095 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 24-210 |
| Cow position: | chr5:47323420-47323605 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 24-221 |
| Cow position: | chr5:45273545-45273350 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 164 |
| Conread position: | 24-223 |
| Cow position: | chr5:458446-458642 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 24-224 |
| Cow position: | chr5:53710735-53710532 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 24-229 |
| Cow position: | chr5:59873136-59872916 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 24-229 |
| Cow position: | chr5:63427052-63426840 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 24-245 |
| Cow position: | chr5:34528510-34528721 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 154, 18 |
| Conread position: | 24-256 |
| Cow position: | chr5:30805123-30805345 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 24-282 |
| Cow position: | chr5:3002872-3003119 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 24-283 |
| Cow position: | chr5:49501870-49501604 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 24-284 |
| Cow position: | chr5:57327752-57328012 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 24-289 |
| Cow position: | chr5:57994912-57994660 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 24-290 |
| Cow position: | chr5:20128009-20128275 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 39 |
| Conread position: | 24-291 |
| Cow position: | chr5:12557337-12557065 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 40, 195 |
| Conread position: | 24-291 |
| Cow position: | chr5:19752260-19752523 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 24-291 |
| Cow position: | chr5:29828004-29828270 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 85, 34 |
| Conread position: | 24-291 |
| Cow position: | chr5:33032128-33032390 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 183, 93 |
| Conread position: | 24-292 |
| Cow position: | chr5:30418929-30419197 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 238 |
| Conread position: | 24-293 |
| Cow position: | chr5:40152433-40152711 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 24-293 |
| Cow position: | chr5:45845739-45845466 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 24-293 |
| Cow position: | chr5:64140488-64140762 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 44, 190 |
| Conread position: | 24-293 |
| Cow position: | chr5:66972383-66972654 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 229 |
| Conread position: | 24-294 |
| Cow position: | chr5:61455800-61456072 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 24-308 |
| Cow position: | chr5:7012893-7012612 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 90 |
| Conread position: | 24-309 |
| Cow position: | chr5:47317016-47316737 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 95, 34 |
| Conread position: | 24-309 |
| Cow position: | chr5:52831421-52831716 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 24-312 |
| Cow position: | chr5:72903274-72902997 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 24-313 |
| Cow position: | chr5:1247218-1247507 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 24-313 |
| Cow position: | chr5:11427280-11426991 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 29, 155 |
| Conread position: | 24-313 |
| Cow position: | chr5:35247157-35246861 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 24-314 |
| Cow position: | chr5:24349063-24349360 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 289 |
| Conread position: | 24-314 |
| Cow position: | chr5:63647519-63647233 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 24-315 |
| Cow position: | chr5:33560778-33560491 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 97, 192 |
| Conread position: | 24-315 |
| Cow position: | chr5:50857891-50858183 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 24-315 |
| Cow position: | chr5:52001666-52001375 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 60, 49 |
| Conread position: | 24-316 |
| Cow position: | chr5:44796776-44796492 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 24-318 |
| Cow position: | chr5:14550626-14550330 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 24-319 |
| Cow position: | chr5:14345140-14344848 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 97, 82 |
| Conread position: | 24-325 |
| Cow position: | chr5:15470887-15471175 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 24-326 |
| Cow position: | chr5:57265950-57265647 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 262 |
| Conread position: | 24-329 |
| Cow position: | chr5:29097322-29097619 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 155 |
| Conread position: | 24-342 |
| Cow position: | chr5:51935147-51935470 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 42 |
| Conread position: | 24-343 |
| Cow position: | chr5:12149494-12149813 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 24-346 |
| Cow position: | chr5:51053695-51053369 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 25-286 |
| Cow position: | chr5:53946852-53947116 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 25-310 |
| Cow position: | chr5:57768025-57767747 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 25-323 |
| Cow position: | chr5:19335828-19335526 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 269 |
| Conread position: | 26-229 |
| Cow position: | chr5:41981327-41981532 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 26-308 |
| Cow position: | chr5:7057443-7057158 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 124 |
| Conread position: | 26-314 |
| Cow position: | chr5:18574130-18574426 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 28-290 |
| Cow position: | chr5:270143-269877 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 31-222 |
| Cow position: | chr5:54086505-54086693 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 90, 31 |
| Conread position: | 31-224 |
| Cow position: | chr5:12866856-12866671 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 31-224 |
| Cow position: | chr5:58856066-58856259 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 109 |
| Conread position: | 31-229 |
| Cow position: | chr5:45420172-45419975 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 31-271 |
| Cow position: | chr5:55796003-55795768 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 31-283 |
| Cow position: | chr5:64523905-64523650 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 31-292 |
| Cow position: | chr5:11769231-11769495 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 31-293 |
| Cow position: | chr5:6444189-6443919 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 79, 32 |
| Conread position: | 31-293 |
| Cow position: | chr5:44848058-44847803 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 31-306 |
| Cow position: | chr5:57526956-57526688 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 93, 35 |
| Conread position: | 31-307 |
| Cow position: | chr5:20779434-20779161 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 31-309 |
| Cow position: | chr5:18289092-18289360 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 31-313 |
| Cow position: | chr5:4280410-4280689 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 33-315 |
| Cow position: | chr5:62811787-62812073 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 33-316 |
| Cow position: | chr5:60210180-60209901 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 182 |
| Conread position: | 33-323 |
| Cow position: | chr5:25597800-25598084 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 34-238 |
| Cow position: | chr5:3588991-3589198 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 35-224 |
| Cow position: | chr5:9369301-9369114 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 30 |
| Conread position: | 36-217 |
| Cow position: | chr5:36838924-36839109 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 157 |
| Conread position: | 36-234 |
| Cow position: | chr5:30949950-30949748 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 36-238 |
| Cow position: | chr5:26094201-26093995 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 36-242 |
| Cow position: | chr5:55019259-55019466 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 36-244 |
| Cow position: | chr5:57787773-57787983 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 36-256 |
| Cow position: | chr5:17602234-17602018 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 36-256 |
| Cow position: | chr5:43992289-43992516 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 142 |
| Conread position: | 36-270 |
| Cow position: | chr5:57686774-57686540 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 36-289 |
| Cow position: | chr5:14904105-14903846 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 14, 220 |
| Conread position: | 36-291 |
| Cow position: | chr5:26262709-26262463 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 36-291 |
| Cow position: | chr5:65941285-65941028 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 156 |
| Conread position: | 36-313 |
| Cow position: | chr5:15479091-15479371 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 36-315 |
| Cow position: | chr5:11668217-11667938 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 33, 38 |
| Conread position: | 36-315 |
| Cow position: | chr5:26549175-26548897 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 36-326 |
| Cow position: | chr5:45405008-45405306 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 76, 33 |
| Conread position: | 37-217 |
| Cow position: | chr5:54350395-54350211 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 37-259 |
| Cow position: | chr5:61492065-61492288 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 37-287 |
| Cow position: | chr5:65883660-65883406 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 37-289 |
| Cow position: | chr5:67932499-67932246 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 37-291 |
| Cow position: | chr5:2309589-2309336 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 154 |
| Conread position: | 37-294 |
| Cow position: | chr5:49668446-49668708 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 31, 232 |
| Conread position: | 37-310 |
| Cow position: | chr5:32975583-32975320 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 37-310 |
| Cow position: | chr5:57101558-57101285 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 142 |
| Conread position: | 37-312 |
| Cow position: | chr5:30247552-30247284 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 37-317 |
| Cow position: | chr5:50101410-50101130 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 30, 172 |
| Conread position: | 37-324 |
| Cow position: | chr5:57371764-57372059 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 38-225 |
| Cow position: | chr5:38739430-38739245 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 29 |
| Conread position: | 38-234 |
| Cow position: | chr5:19523869-19524067 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 38-275 |
| Cow position: | chr5:6503914-6503670 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 38-283 |
| Cow position: | chr5:61007034-61007278 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 30, 226 |
| Conread position: | 38-293 |
| Cow position: | chr5:30406175-30406438 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 38-313 |
| Cow position: | chr5:61576514-61576794 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 38-324 |
| Cow position: | chr5:68537699-68537407 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 38-347 |
| Cow position: | chr5:55783978-55783685 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 40-293 |
| Cow position: | chr5:30253712-30253964 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 40-321 |
| Cow position: | chr5:37894963-37895248 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 246 |
| Conread position: | 41-291 |
| Cow position: | chr5:35969507-35969762 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 42-229 |
| Cow position: | chr5:57230367-57230175 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 42-292 |
| Cow position: | chr5:63240949-63241202 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 42-309 |
| Cow position: | chr5:50723021-50723288 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 82, 21 |
| Conread position: | 42-333 |
| Cow position: | chr5:5855834-5856121 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 43-275 |
| Cow position: | chr5:57419819-57419590 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 78, 181 |
| Conread position: | 44-293 |
| Cow position: | chr5:69033244-69033000 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 116 |
| Conread position: | 47-278 |
| Cow position: | chr5:58555112-58555365 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 49-314 |
| Cow position: | chr5:34347748-34347489 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 49-314 |
| Cow position: | chr5:39937097-39937359 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 61 |
| Conread position: | 51-291 |
| Cow position: | chr5:69383237-69383473 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 52-313 |
| Cow position: | chr5:2827359-2827621 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 65, 10 |
| Conread position: | 52-315 |
| Cow position: | chr5:39447555-39447278 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 53-339 |
| Cow position: | chr5:61771097-61771389 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 8, 246 |
| Conread position: | 54-276 |
| Cow position: | chr5:37713669-37713445 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 55-272 |
| Cow position: | chr5:60741231-60741448 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 55-287 |
| Cow position: | chr5:29681085-29681312 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 69, 105 |
| Conread position: | 55-317 |
| Cow position: | chr5:53055575-53055306 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 56-287 |
| Cow position: | chr5:30561919-30562146 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 161 |
| Conread position: | 62-293 |
| Cow position: | chr5:65343617-65343853 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 63-297 |
| Cow position: | chr5:53935552-53935326 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 35 |
| Conread position: | 65-313 |
| Cow position: | chr5:15364266-15364518 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 81 |
| Conread position: | 66-234 |
| Cow position: | chr5:6033434-6033603 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 166 |
| Conread position: | 66-275 |
| Cow position: | chr5:57279382-57279592 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 66-278 |
| Cow position: | chr5:16939596-16939383 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 66-278 |
| Cow position: | chr5:35513213-35513430 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 66-286 |
| Cow position: | chr5:35397503-35397721 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 66-290 |
| Cow position: | chr5:2469209-2468992 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 55, 94 |
| Conread position: | 66-293 |
| Cow position: | chr5:71015892-71015661 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 14, 173 |
| Conread position: | 66-299 |
| Cow position: | chr5:25020769-25020526 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 55, 107 |
| Conread position: | 66-306 |
| Cow position: | chr5:35229140-35228907 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 59, 101 |
| Conread position: | 66-308 |
| Cow position: | chr5:30276688-30276924 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 66-309 |
| Cow position: | chr5:45225815-45225582 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 66-309 |
| Cow position: | chr5:61999559-61999313 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 66-313 |
| Cow position: | chr5:55965896-55965644 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 54, 245 |
| Conread position: | 66-314 |
| Cow position: | chr5:59384689-59384441 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 126, 32 |
| Conread position: | 66-315 |
| Cow position: | chr5:6126837-6127080 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 231, 43 |
| Conread position: | 66-315 |
| Cow position: | chr5:40889299-40889046 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 66-315 |
| Cow position: | chr5:58519418-58519168 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 59, 48 |
| Conread position: | 66-315 |
| Cow position: | chr5:60515030-60514783 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 52, 89 |
| Conread position: | 66-318 |
| Cow position: | chr5:56028541-56028298 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 66-324 |
| Cow position: | chr5:65760531-65760278 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 227, 15 |
| Conread position: | 66-326 |
| Cow position: | chr5:54750813-54751066 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 236, 34 |
| Conread position: | 66-329 |
| Cow position: | chr5:65679972-65679712 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 57 |
| Conread position: | 66-330 |
| Cow position: | chr5:35989755-35990024 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 30, 85 |
| Conread position: | 66-334 |
| Cow position: | chr5:46541057-46540801 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 52 |
| Conread position: | 66-345 |
| Cow position: | chr5:57062532-57062249 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 8, 122 |
| Conread position: | 66-347 |
| Cow position: | chr5:64027021-64026729 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 67-226 |
| Cow position: | chr5:24946239-24946401 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 67-229 |
| Cow position: | chr5:60908665-60908826 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 67-248 |
| Cow position: | chr5:11289394-11289209 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 67-286 |
| Cow position: | chr5:69751388-69751168 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 67-293 |
| Cow position: | chr5:47756776-47756996 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 67-300 |
| Cow position: | chr5:18062320-18062079 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 105 |
| Conread position: | 67-311 |
| Cow position: | chr5:46681724-46681481 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 67-313 |
| Cow position: | chr5:52852970-52853212 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 52, 146 |
| Conread position: | 67-315 |
| Cow position: | chr5:36868736-36868986 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 93 |
| Conread position: | 67-345 |
| Cow position: | chr5:43846375-43846100 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 81, 51 |
| Conread position: | 68-282 |
| Cow position: | chr5:50600048-50600259 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 68-290 |
| Cow position: | chr5:56860447-56860664 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 68-290 |
| Cow position: | chr5:72045674-72045456 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 54 |
| Conread position: | 68-291 |
| Cow position: | chr5:4267670-4267882 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 68-293 |
| Cow position: | chr5:64176126-64175906 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 68-309 |
| Cow position: | chr5:52137935-52138174 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 45, 174 |
| Conread position: | 69-286 |
| Cow position: | chr5:52723578-52723792 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 69-313 |
| Cow position: | chr5:44810238-44809993 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 69-332 |
| Cow position: | chr5:5016431-5016690 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 206, 10 |
| Conread position: | 70-310 |
| Cow position: | chr5:59627102-59627333 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 51, 143 |
| Conread position: | 70-315 |
| Cow position: | chr5:38833125-38833360 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 70-315 |
| Cow position: | chr5:63187881-63187630 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 42, 96 |
| Conread position: | 70-316 |
| Cow position: | chr5:59873410-59873168 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 70-319 |
| Cow position: | chr5:56072159-56071895 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 70-345 |
| Cow position: | chr5:12873753-12874026 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 70-347 |
| Cow position: | chr5:11562721-11562457 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 51, 142 |
| Conread position: | 71-236 |
| Cow position: | chr5:25730483-25730656 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 72-279 |
| Cow position: | chr5:60948137-60948342 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 73-291 |
| Cow position: | chr5:43858414-43858196 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 73-315 |
| Cow position: | chr5:29970710-29970959 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 184 |
| Conread position: | 75-313 |
| Cow position: | chr5:41431663-41431424 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 75-315 |
| Cow position: | chr5:17828472-17828231 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 46, 126 |
| Conread position: | 78-277 |
| Cow position: | chr5:36142997-36143186 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 78-284 |
| Cow position: | chr5:39146974-39146766 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 78-292 |
| Cow position: | chr5:22565629-22565842 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 79-290 |
| Cow position: | chr5:73168000-73167793 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 79-309 |
| Cow position: | chr5:3743333-3743562 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 114 |
| Conread position: | 80-300 |
| Cow position: | chr5:36370295-36370505 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 80-341 |
| Cow position: | chr5:2240977-2240714 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 228, 37 |
| Conread position: | 81-291 |
| Cow position: | chr5:26894709-26894491 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 81-292 |
| Cow position: | chr5:60952674-60952885 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 81-312 |
| Cow position: | chr5:4120038-4120268 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 43, 215 |
| Conread position: | 81-315 |
| Cow position: | chr5:12299924-12300154 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 81-346 |
| Cow position: | chr5:11229659-11229397 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 81-347 |
| Cow position: | chr5:60212597-60212872 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 82-292 |
| Cow position: | chr5:23208971-23209182 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 39, 162 |
| Conread position: | 82-293 |
| Cow position: | chr5:25035240-25035030 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 82-293 |
| Cow position: | chr5:44196915-44196706 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 124 |
| Conread position: | 82-326 |
| Cow position: | chr5:69461347-69461588 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 83-313 |
| Cow position: | chr5:7177166-7177399 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 84-293 |
| Cow position: | chr5:57825152-57825362 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 28, 178 |
| Conread position: | 84-297 |
| Cow position: | chr5:66659525-66659742 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 86-282 |
| Cow position: | chr5:54312619-54312814 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 136 |
| Conread position: | 86-293 |
| Cow position: | chr5:33918687-33918479 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 86-309 |
| Cow position: | chr5:26147610-26147827 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 86-340 |
| Cow position: | chr5:28814929-28814674 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 221, 206 |
| Conread position: | 87-283 |
| Cow position: | chr5:72167482-72167284 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 88-279 |
| Cow position: | chr5:6695565-6695759 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 92-309 |
| Cow position: | chr5:71445416-71445631 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 95-275 |
| Cow position: | chr5:51125982-51125812 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 113 |
| Conread position: | 98-283 |
| Cow position: | chr5:54753222-54753035 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 98-283 |
| Cow position: | chr5:62341058-62341244 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 98-284 |
| Cow position: | chr5:20812576-20812764 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 98-291 |
| Cow position: | chr5:3677753-3677950 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 98-291 |
| Cow position: | chr5:50579136-50578942 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 98-307 |
| Cow position: | chr5:47220518-47220730 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 98-309 |
| Cow position: | chr5:13270987-13270774 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 98-310 |
| Cow position: | chr5:16185408-16185618 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 197 |
| Conread position: | 98-313 |
| Cow position: | chr5:61580312-61580523 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 76 |
| Conread position: | 99-283 |
| Cow position: | chr5:16668728-16668907 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 99-283 |
| Cow position: | chr5:53980723-53980538 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 99-284 |
| Cow position: | chr5:38040533-38040353 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 99-290 |
| Cow position: | chr5:44734694-44734506 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 99-305 |
| Cow position: | chr5:63173012-63172812 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 99-315 |
| Cow position: | chr5:62011714-62011931 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 164 |
| Conread position: | 99-324 |
| Cow position: | chr5:36822918-36823123 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 99-324 |
| Cow position: | chr5:57399221-57398997 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 100-275 |
| Cow position: | chr5:42288691-42288867 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 100-315 |
| Cow position: | chr5:58756374-58756154 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 101-282 |
| Cow position: | chr5:51233986-51233811 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 112 |
| Conread position: | 103-315 |
| Cow position: | chr5:64492309-64492519 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 192 |
| Conread position: | 106-281 |
| Cow position: | chr5:54330918-54331099 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 81 |
| Conread position: | 106-284 |
| Cow position: | chr5:50087808-50087983 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 106-291 |
| Cow position: | chr5:60523773-60523949 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 106-293 |
| Cow position: | chr5:7676117-7675934 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 106-293 |
| Cow position: | chr5:31648460-31648639 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 106-293 |
| Cow position: | chr5:57497386-57497202 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 106-293 |
| Cow position: | chr5:62995995-62996183 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 106-308 |
| Cow position: | chr5:27084335-27084538 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 106-310 |
| Cow position: | chr5:12562722-12562519 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 106-310 |
| Cow position: | chr5:17104891-17105084 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 106-315 |
| Cow position: | chr5:35190148-35190351 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 106-315 |
| Cow position: | chr5:38820622-38820418 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 106-322 |
| Cow position: | chr5:54127328-54127538 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 106-323 |
| Cow position: | chr5:1694050-1693837 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 106-338 |
| Cow position: | chr5:40122572-40122338 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 106-339 |
| Cow position: | chr5:49821466-49821703 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 107-292 |
| Cow position: | chr5:24915488-24915302 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 107-293 |
| Cow position: | chr5:29829850-29829663 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 107-293 |
| Cow position: | chr5:54980277-54980462 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 107-309 |
| Cow position: | chr5:46710621-46710823 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 107-309 |
| Cow position: | chr5:46715521-46715723 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 107-310 |
| Cow position: | chr5:41736221-41736423 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 156 |
| Conread position: | 107-313 |
| Cow position: | chr5:43465564-43465771 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 107-314 |
| Cow position: | chr5:57139954-57139748 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 107-315 |
| Cow position: | chr5:37090600-37090391 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 108-293 |
| Cow position: | chr5:47279605-47279800 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 108-307 |
| Cow position: | chr5:28881652-28881446 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 194 |
| Conread position: | 108-312 |
| Cow position: | chr5:2355560-2355760 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 108-312 |
| Cow position: | chr5:34288213-34288011 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 6, 14 |
| Conread position: | 108-314 |
| Cow position: | chr5:22102598-22102794 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 108-315 |
| Cow position: | chr5:48062077-48061859 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 110-292 |
| Cow position: | chr5:60761701-60761519 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-308 |
| Cow position: | chr5:37842235-37842040 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 110-314 |
| Cow position: | chr5:54340811-54341011 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 110-316 |
| Cow position: | chr5:3817645-3817440 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 110-326 |
| Cow position: | chr5:50421934-50421715 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 110-333 |
| Cow position: | chr5:53779197-53779420 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 115-291 |
| Cow position: | chr5:73914396-73914566 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 127 |
| Conread position: | 115-324 |
| Cow position: | chr5:67950738-67950525 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 190, 86 |
| Conread position: | 118-309 |
| Cow position: | chr5:34918397-34918585 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 170, 89 |
| Conread position: | 118-312 |
| Cow position: | chr5:37253480-37253664 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 119-291 |
| Cow position: | chr5:61201811-61201983 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-292 |
| Cow position: | chr5:55162678-55162851 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-315 |
| Cow position: | chr5:32935796-32935990 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 177, 37 |
| Conread position: | 119-315 |
| Cow position: | chr5:46499612-46499809 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 119-315 |
| Cow position: | chr5:60207760-60207950 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 119-315 |
| Cow position: | chr5:64555581-64555780 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 119-335 |
| Cow position: | chr5:59958228-59958430 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 120-286 |
| Cow position: | chr5:69682296-69682130 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-310 |
| Cow position: | chr5:49207274-49207090 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 123-293 |
| Cow position: | chr5:14454097-14454268 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 123-293 |
| Cow position: | chr5:57087007-57086838 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 123-293 |
| Cow position: | chr5:63940005-63939834 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 123-311 |
| Cow position: | chr5:56525656-56525468 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-313 |
| Cow position: | chr5:63068667-63068477 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-314 |
| Cow position: | chr5:58232194-58232385 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 123-315 |
| Cow position: | chr5:54404798-54404615 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 123-316 |
| Cow position: | chr5:31527339-31527145 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 83, 143 |
| Conread position: | 123-331 |
| Cow position: | chr5:30492738-30492531 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 88, 173 |
| Conread position: | 123-343 |
| Cow position: | chr5:61043242-61043459 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 128-291 |
| Cow position: | chr5:30132803-30132644 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 128-291 |
| Cow position: | chr5:43611759-43611921 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 128-291 |
| Cow position: | chr5:51800550-51800387 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 128-291 |
| Cow position: | chr5:60117489-60117650 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 128-293 |
| Cow position: | chr5:56327660-56327502 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 128-293 |
| Cow position: | chr5:56477267-56477429 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 128-308 |
| Cow position: | chr5:8762386-8762208 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 128-308 |
| Cow position: | chr5:72035037-72034861 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 128-309 |
| Cow position: | chr5:56881404-56881589 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 128-310 |
| Cow position: | chr5:40413208-40413017 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 128-315 |
| Cow position: | chr5:57447605-57447419 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 128-342 |
| Cow position: | chr5:40292878-40292663 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 165, 151 |
| Conread position: | 129-257 |
| Cow position: | chr5:46749764-46749637 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 129-282 |
| Cow position: | chr5:64843909-64843752 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 45 |
| Conread position: | 129-285 |
| Cow position: | chr5:50525587-50525736 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 129-289 |
| Cow position: | chr5:34787636-34787792 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 129-289 |
| Cow position: | chr5:59662996-59662837 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 129-292 |
| Cow position: | chr5:17987832-17987670 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 129-292 |
| Cow position: | chr5:24464809-24464961 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 129-292 |
| Cow position: | chr5:43839937-43839774 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 129-293 |
| Cow position: | chr5:43106863-43107021 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 129-293 |
| Cow position: | chr5:55749975-55749812 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 129-306 |
| Cow position: | chr5:55943654-55943482 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 129-310 |
| Cow position: | chr5:29599484-29599314 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 129-313 |
| Cow position: | chr5:73424619-73424430 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 129-316 |
| Cow position: | chr5:35235627-35235439 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 129-320 |
| Cow position: | chr5:21721408-21721220 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 162, 84 |
| Conread position: | 129-320 |
| Cow position: | chr5:68461611-68461418 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 165, 133 |
| Conread position: | 129-343 |
| Cow position: | chr5:15770393-15770181 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 129-346 |
| Cow position: | chr5:21339207-21338987 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 45 |
| Conread position: | 130-293 |
| Cow position: | chr5:1005805-1005642 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 132-290 |
| Cow position: | chr5:54713000-54712847 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 132-291 |
| Cow position: | chr5:41530875-41530714 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 132-311 |
| Cow position: | chr5:59335835-59336014 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 168 |
| Conread position: | 132-324 |
| Cow position: | chr5:56643132-56643326 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 107, 82 |
| Conread position: | 132-325 |
| Cow position: | chr5:55949614-55949422 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 132-339 |
| Cow position: | chr5:51012064-51012275 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 159, 53 |
| Conread position: | 133-279 |
| Cow position: | chr5:29261770-29261916 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-340 |
| Cow position: | chr5:30497563-30497761 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 134-293 |
| Cow position: | chr5:67456777-67456629 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 136-290 |
| Cow position: | chr5:4726383-4726221 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 136-315 |
| Cow position: | chr5:24108991-24108809 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 136-316 |
| Cow position: | chr5:9487015-9486835 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 136-333 |
| Cow position: | chr5:67463052-67463253 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 157, 65 |
| Conread position: | 136-340 |
| Cow position: | chr5:37941738-37941539 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 136-347 |
| Cow position: | chr5:41755920-41755709 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 155, 113 |
| Conread position: | 139-292 |
| Cow position: | chr5:38770543-38770390 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-292 |
| Cow position: | chr5:54555118-54554962 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 139-293 |
| Cow position: | chr5:53825042-53824889 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 140-293 |
| Cow position: | chr5:25450027-25450168 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 140-315 |
| Cow position: | chr5:19626651-19626819 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 144-291 |
| Cow position: | chr5:16900816-16900962 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 145-337 |
| Cow position: | chr5:6961994-6962188 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 147-286 |
| Cow position: | chr5:52778486-52778347 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-291 |
| Cow position: | chr5:27099430-27099577 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 147-293 |
| Cow position: | chr5:45854577-45854725 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 147-309 |
| Cow position: | chr5:58487455-58487613 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 147-314 |
| Cow position: | chr5:43815737-43815571 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 147-326 |
| Cow position: | chr5:57231714-57231884 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 147-331 |
| Cow position: | chr5:56563834-56564013 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 146, 61 |
| Conread position: | 147-344 |
| Cow position: | chr5:56624437-56624238 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 147-346 |
| Cow position: | chr5:19972727-19972532 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 148-318 |
| Cow position: | chr5:16939827-16939656 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 149-308 |
| Cow position: | chr5:12340034-12339883 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 149-344 |
| Cow position: | chr5:4728156-4728344 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 151-292 |
| Cow position: | chr5:44868441-44868578 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 153-315 |
| Cow position: | chr5:70346387-70346550 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 63, 115 |
| Conread position: | 159-293 |
| Cow position: | chr5:41639504-41639370 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 160-291 |
| Cow position: | chr5:40740236-40740104 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 160-315 |
| Cow position: | chr5:52125302-52125145 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 133, 99 |
| Conread position: | 162-293 |
| Cow position: | chr5:37572463-37572332 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 169-333 |
| Cow position: | chr5:15413198-15413358 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 170-310 |
| Cow position: | chr5:44582666-44582521 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 171-315 |
| Cow position: | chr5:43434900-43434755 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 173-291 |
| Cow position: | chr5:21375008-21374894 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 178-287 |
| Cow position: | chr5:59517147-59517040 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 178-315 |
| Cow position: | chr5:72867161-72867298 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-344 |
| Cow position: | chr5:32672724-32672555 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 181-311 |
| Cow position: | chr5:3492298-3492431 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 182-291 |
| Cow position: | chr5:20387268-20387377 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-315 |
| Cow position: | chr5:17254109-17253986 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 182-321 |
| Cow position: | chr5:1122213-1122355 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 182-323 |
| Cow position: | chr5:34193254-34193390 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 182-323 |
| Cow position: | chr5:62543954-62544089 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 184-309 |
| Cow position: | chr5:74690137-74690014 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 184-324 |
| Cow position: | chr5:56428457-56428320 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 186-300 |
| Cow position: | chr5:50703930-50703816 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-325 |
| Cow position: | chr5:56578819-56578959 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.