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Cow genome map

           
Conread name:
           
rspc014_m21.y1
        

               
Conread position:
               
1-128
               

               
Cow position:
               
chr11:6329053-6329187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr11:68570865-68570722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr11:73478428-73478563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr11:49105865-49106009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr11:62808841-62808697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr11:77207856-77207999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:17968768-17968590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr11:53130619-53130806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:8105590-8105782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:31900855-31901043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr11:65857665-65857857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr11:81174697-81174890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr11:17112819-17112606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr11:27386532-27386302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr11:48042231-48041994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr11:22932163-22931930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 82
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr11:42003149-42002899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 146
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr11:38874595-38874339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr11:7497836-7497583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr11:30120854-30120597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr11:32377995-32378252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:44642478-44642208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr11:34829971-34829698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr11:29947119-29946817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr11:23138253-23137955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr11:63482618-63482332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr11:42358932-42359219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
253, 26
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr11:30924960-30925267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr11:62155433-62155752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 282
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr11:2092148-2092446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr11:54334143-54334447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr11:70609595-70609917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr11:71168770-71168476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr11:32436141-32436476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr11:23385437-23385093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:68207030-68206698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr11:11557976-11558335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr11:81406350-81406001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr11:73354246-73353900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr11:36981375-36981736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr11:70459382-70459730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr11:75177696-75178071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr11:77750960-77750588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr11:19487668-19487305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr11:45872511-45872130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 178
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr11:81913911-81913543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 139
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr11:4207121-4207493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr11:5416707-5417069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr11:20761652-20762035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr11:37804746-37804369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr11:43524428-43524793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr11:48932776-48932406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr11:49152760-49153123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr11:65762789-65762402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr11:73797367-73796985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr11:80788103-80787704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr11:19247387-19247018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 117
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr11:26535587-26535971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr11:68912950-68913330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr11:40792886-40792504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
203, 36
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr11:66188513-66188131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr11:81138033-81138403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr11:30720905-30721294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 101
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr11:1486059-1485667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
33, 196
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr11:3920497-3920107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr11:42884963-42884583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr11:77546226-77546594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr11:46746442-46746837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr11:45646786-45646387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr11:3726093-3726493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr11:40818831-40818430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 142
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr11:171889-171511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr11:21549303-21549688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr11:25620588-25620184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr11:34616076-34616465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr11:47351157-47351541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr11:2788187-2788607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 292
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr11:85723509-85723899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr11:4663231-4662852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr11:5961120-5961520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr11:48649785-48650200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr11:27913082-27913497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr11:11125471-11125876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 146
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr11:29916345-29916767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr11:4436140-4436558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr11:5433075-5433498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr11:17860346-17859924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr11:43430642-43430227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr11:51293602-51293173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr11:58990318-58990742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr11:33341339-33340903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr11:48544250-48544673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr11:81848668-81849120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr11:27248299-27248722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr11:10076577-10076761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr11:83196307-83196523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr11:55014198-55013932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr11:26483523-26483803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr11:36799490-36799204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
2-383
               

               
Cow position:
               
chr11:51687917-51687549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:15016854-15017253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr11:75480218-75479824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr11:78381242-78380868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr11:17889918-17889525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 121
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr11:30708311-30708717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr11:40458929-40459324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
389, 35
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr11:34962870-34963290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 225
               

               
Conread position:
               
2-427
               

               
Cow position:
               
chr11:36182497-36182919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
2-431
               

               
Cow position:
               
chr11:33348376-33347965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr11:75748244-75748414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr11:3833543-3833276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr11:77118522-77118802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
79, 130
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr11:41812099-41811799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
3-375
               

               
Cow position:
               
chr11:14470180-14470540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr11:30191983-30192360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr11:10095157-10095535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr11:44031813-44032208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr11:67345829-67345457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr11:81300799-81300419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr11:62620194-62620581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr11:27932079-27932512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr11:70382882-70382464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
4-131
               

               
Cow position:
               
chr11:25165254-25165383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-131
               

               
Cow position:
               
chr11:84890938-84890809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
4-134
               

               
Cow position:
               
chr11:74929594-74929727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
4-146
               

               
Cow position:
               
chr11:32609814-32609960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr11:63520587-63520745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
4-170
               

               
Cow position:
               
chr11:71846534-71846369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr11:77241188-77241358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr11:17553532-17553356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr11:47165323-47165152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr11:18591620-18591444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr11:6154226-6154401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr11:37347288-37347470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr11:71455602-71455784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr11:12555606-12555411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr11:81614827-81614647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr11:47586534-47586353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr11:63516638-63516824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr11:41239460-41239266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr11:57171015-57170825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr11:62979292-62979499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 145
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr11:16251434-16251234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr11:2309685-2309884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr11:14094609-14094381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr11:81281759-81282008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr11:875781-875541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr11:61859085-61858841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr11:77766787-77766530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr11:18588766-18588520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr11:32749922-32750176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 147
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr11:70273115-70273374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr11:49231688-49231946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr11:11232643-11232372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr11:35874180-35873912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr11:36986776-36987041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr11:71501317-71501039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr11:50778185-50778463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr11:18572618-18572898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr11:23128725-23128442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr11:58588159-58588443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr11:80761569-80761279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr11:1362666-1362368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 258
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr11:47544942-47545237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr11:23232699-23232410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr11:65409343-65409047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr11:59872745-59873040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr11:62151067-62150783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr11:7590005-7590302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr11:377834-377525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 156
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr11:44234165-44234471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr11:28643893-28644206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr11:35684683-35684383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr11:36238595-36238897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr11:48272009-48272319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr11:27764967-27765283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr11:6835343-6835666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr11:23586449-23586772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
4-331
               

               
Cow position:
               
chr11:43897952-43898274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
4-339
               

               
Cow position:
               
chr11:18244127-18243802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr11:3393397-3393063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr11:33414048-33414388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr11:87155329-87155676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr11:63202425-63202085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
218, 43
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr11:10687073-10686723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr11:9463643-9464001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr11:4674636-4674278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr11:24601785-24602123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr11:34145102-34144752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr11:8525299-8524947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr11:44636946-44636583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr11:68910037-68909681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr11:3702762-3703126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr11:13043332-13042973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr11:21844321-21843962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr11:32198754-32199124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr11:55761692-55762035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr11:68841016-68841390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr11:83066309-83066673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:4732153-4732527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:19500967-19500621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:20238488-20238859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:35154013-35153637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:36286513-36286887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:39115308-39115656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:47639216-47638841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:50153004-50152630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:74316525-74316889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
4-382
               

               
Cow position:
               
chr11:23251789-23251413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
4-382
               

               
Cow position:
               
chr11:35347943-35347565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
4-384
               

               
Cow position:
               
chr11:41215558-41215921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
4-384
               

               
Cow position:
               
chr11:53773487-53773871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr11:57725014-57724634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr11:20684765-20684379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr11:67931682-67931300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 179
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr11:6400258-6399872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr11:17227834-17227458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr11:30764294-30764684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 131
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:2874200-2874595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:15632745-15632367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:31525678-31526073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
31, 286
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:33349887-33349509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:40995-41364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:27746735-27747112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:28367516-28367905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:32421672-32421291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:48383341-48383724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 141
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:70601009-70600633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 194
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:71493046-71492670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 137
               

               
Conread position:
               
4-394
               

               
Cow position:
               
chr11:6580628-6581032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
4-394
               

               
Cow position:
               
chr11:45631950-45631583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
4-395
               

               
Cow position:
               
chr11:61202977-61203371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
4-395
               

               
Cow position:
               
chr11:63065468-63065854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
4-395
               

               
Cow position:
               
chr11:70484047-70483652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr11:35723791-35724165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
4-398
               

               
Cow position:
               
chr11:21894339-21893946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
79, 113
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr11:5418451-5418053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr11:19592183-19591793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 135
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr11:42016824-42016431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr11:56728761-56729137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr11:62490248-62490622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 47
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr11:8495851-8496236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 143
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr11:34121012-34121404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr11:42836146-42835747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 96
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr11:55052697-55053067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr11:65058800-65058409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 133
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr11:34646403-34646800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr11:40467309-40466918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr11:55333723-55334120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr11:59902702-59903095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 136
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr11:76369704-76369323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr11:17278854-17278476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr11:72375874-72375460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
4-403
               

               
Cow position:
               
chr11:36940787-36940387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
4-404
               

               
Cow position:
               
chr11:46329312-46329708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr11:27405254-27404862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
4-406
               

               
Cow position:
               
chr11:19593633-19594025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
4-406
               

               
Cow position:
               
chr11:30165321-30165722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 141
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr11:2907707-2907321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr11:5328609-5328999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr11:13191034-13191450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr11:25791877-25791480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 25
               

               
Conread position:
               
4-411
               

               
Cow position:
               
chr11:5075408-5075014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
4-412
               

               
Cow position:
               
chr11:14649502-14649093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
35, 134
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr11:23272190-23271787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr11:15503915-15504326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
35, 178
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr11:65607879-65607477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-416
               

               
Cow position:
               
chr11:63434244-63433851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr11:46748052-46747637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
4-418
               

               
Cow position:
               
chr11:61454720-61454278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
4-418
               

               
Cow position:
               
chr11:69119114-69119514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
4-428
               

               
Cow position:
               
chr11:9221911-9221488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
4-429
               

               
Cow position:
               
chr11:24438413-24437984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
4-431
               

               
Cow position:
               
chr11:13592548-13592975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
4-431
               

               
Cow position:
               
chr11:17495932-17495515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
4-431
               

               
Cow position:
               
chr11:32595281-32595694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
4-431
               

               
Cow position:
               
chr11:83397711-83398142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 143
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr11:36301265-36301098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr11:36672235-36672039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 145
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr11:42793160-42792932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr11:18341223-18340973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr11:5226926-5226649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr11:45898240-45897961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr11:5031962-5031682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr11:77128475-77128775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr11:1071276-1070974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
22, 26
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr11:63847665-63847963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr11:45277341-45276965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 137
               

               
Conread position:
               
5-383
               

               
Cow position:
               
chr11:6594433-6594042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 8
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr11:3720067-3720446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr11:7458474-7458089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
28, 140
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr11:29960119-29960486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr11:64077687-64077297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
5-401
               

               
Cow position:
               
chr11:36194106-36194498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
5-406
               

               
Cow position:
               
chr11:15772907-15772505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr11:44818912-44819310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
30, 131
               

               
Conread position:
               
5-431
               

               
Cow position:
               
chr11:13499825-13500251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
5-431
               

               
Cow position:
               
chr11:38334330-38334757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr11:18372892-18373150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
6-284
               

               
Cow position:
               
chr11:49934927-49934641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr11:42044174-42043903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr11:33310783-33311077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr11:79960975-79960678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 260
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr11:81162616-81162284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr11:77705573-77705925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr11:30639132-30638775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr11:2917772-2917410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr11:47899093-47899433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr11:52297407-52297028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr11:7924773-7924392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr11:31413267-31413668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr11:30954813-30955117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
7-429
               

               
Cow position:
               
chr11:18509205-18508805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
9-135
               

               
Cow position:
               
chr11:53719764-53719888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr11:64638712-64638443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
9-301
               

               
Cow position:
               
chr11:56654368-56654662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr11:83230569-83230288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
9-313
               

               
Cow position:
               
chr11:61958930-61958624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
9-345
               

               
Cow position:
               
chr11:1157461-1157798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
9-366
               

               
Cow position:
               
chr11:34113086-34113431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr11:17831402-17831023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr11:65157595-65157222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
9-382
               

               
Cow position:
               
chr11:79728853-79728486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr11:38236063-38236436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 20
               

               
Conread position:
               
9-416
               

               
Cow position:
               
chr11:80923507-80923109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
10-310
               

               
Cow position:
               
chr11:40573516-40573220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
10-401
               

               
Cow position:
               
chr11:66041095-66041477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
11-308
               

               
Cow position:
               
chr11:47004169-47004457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
11-401
               

               
Cow position:
               
chr11:48672537-48672918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
13-133
               

               
Cow position:
               
chr11:78819922-78820040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
13-141
               

               
Cow position:
               
chr11:40860890-40860758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
13-141
               

               
Cow position:
               
chr11:57111489-57111355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
13-171
               

               
Cow position:
               
chr11:61299157-61299002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
13-173
               

               
Cow position:
               
chr11:9837281-9837118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
13-173
               

               
Cow position:
               
chr11:43914037-43914195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
13-236
               

               
Cow position:
               
chr11:2811908-2811687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr11:73512608-73512350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr11:71341631-71341359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
13-305
               

               
Cow position:
               
chr11:38577948-38577668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
13-305
               

               
Cow position:
               
chr11:67747105-67747394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
13-312
               

               
Cow position:
               
chr11:83687607-83687316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
13-313
               

               
Cow position:
               
chr11:34032382-34032080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
13-334
               

               
Cow position:
               
chr11:82940801-82940488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
13-345
               

               
Cow position:
               
chr11:71868788-71868454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
13-361
               

               
Cow position:
               
chr11:3780601-3780250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
13-366
               

               
Cow position:
               
chr11:38670503-38670859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
13-368
               

               
Cow position:
               
chr11:48474523-48474881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
13-379
               

               
Cow position:
               
chr11:45282748-45283110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
13-386
               

               
Cow position:
               
chr11:9270907-9270548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
13-399
               

               
Cow position:
               
chr11:66896979-66896597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
13-405
               

               
Cow position:
               
chr11:36058625-36059005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
13-411
               

               
Cow position:
               
chr11:5485830-5486231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr11:26144278-26143879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 111
               

               
Conread position:
               
13-420
               

               
Cow position:
               
chr11:77745435-77745022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
13-428
               

               
Cow position:
               
chr11:36848747-36849150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
13-431
               

               
Cow position:
               
chr11:52381051-52380636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
15-282
               

               
Cow position:
               
chr11:56734454-56734717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
15-394
               

               
Cow position:
               
chr11:62964311-62964692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
16-182
               

               
Cow position:
               
chr11:81605451-81605618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
16-186
               

               
Cow position:
               
chr11:65843265-65843101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
16-203
               

               
Cow position:
               
chr11:33468536-33468720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
16-279
               

               
Cow position:
               
chr11:60143475-60143217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
16-302
               

               
Cow position:
               
chr11:20602056-20602334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
16-310
               

               
Cow position:
               
chr11:80530189-80530476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
16-379
               

               
Cow position:
               
chr11:18698701-18699053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
16-379
               

               
Cow position:
               
chr11:53778439-53778803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
16-389
               

               
Cow position:
               
chr11:67615107-67614732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 271
               

               
Conread position:
               
16-393
               

               
Cow position:
               
chr11:83043540-83043170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr11:7873971-7874344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
16-401
               

               
Cow position:
               
chr11:55744300-55744673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
16-419
               

               
Cow position:
               
chr11:1625394-1624997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
16-431
               

               
Cow position:
               
chr11:81143727-81143308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
17-133
               

               
Cow position:
               
chr11:29786776-29786662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
17-134
               

               
Cow position:
               
chr11:18399507-18399383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
17-293
               

               
Cow position:
               
chr11:8148072-8147800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr11:70086149-70086445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 229
               

               
Conread position:
               
17-366
               

               
Cow position:
               
chr11:29659384-29659729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
17-367
               

               
Cow position:
               
chr11:28993904-28993577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
17-371
               

               
Cow position:
               
chr11:22978040-22977707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
17-379
               

               
Cow position:
               
chr11:32055360-32055002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
17-380
               

               
Cow position:
               
chr11:30830791-30830439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
17-385
               

               
Cow position:
               
chr11:41986219-41985859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
17-401
               

               
Cow position:
               
chr11:64104234-64103847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
17-413
               

               
Cow position:
               
chr11:65826914-65826534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
18-198
               

               
Cow position:
               
chr11:15525779-15525972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
18-315
               

               
Cow position:
               
chr11:36658992-36658705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
18-379
               

               
Cow position:
               
chr11:46580185-46580531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
18-420
               

               
Cow position:
               
chr11:1380507-1380901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr11:53511908-53512179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 170
               

               
Conread position:
               
19-368
               

               
Cow position:
               
chr11:8545186-8544845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
19-379
               

               
Cow position:
               
chr11:67600609-67600961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
19-412
               

               
Cow position:
               
chr11:2083963-2084359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
19-418
               

               
Cow position:
               
chr11:52133008-52132596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
20-261
               

               
Cow position:
               
chr11:41176122-41175881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
20-282
               

               
Cow position:
               
chr11:63469707-63469963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
20-367
               

               
Cow position:
               
chr11:77319240-77319583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
21-370
               

               
Cow position:
               
chr11:30209992-30209649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
21-373
               

               
Cow position:
               
chr11:49148870-49149223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
21-379
               

               
Cow position:
               
chr11:16907214-16906848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
21-390
               

               
Cow position:
               
chr11:2327516-2327883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr11:33287121-33286742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
22-155
               

               
Cow position:
               
chr11:29266370-29266506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
22-387
               

               
Cow position:
               
chr11:55973084-55972740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
24-189
               

               
Cow position:
               
chr11:86894510-86894678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
24-387
               

               
Cow position:
               
chr11:55494514-55494854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
24-415
               

               
Cow position:
               
chr11:45742217-45742585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
27-373
               

               
Cow position:
               
chr11:46998823-46999163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
27-387
               

               
Cow position:
               
chr11:40608759-40608404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr11:35693534-35693881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
29-385
               

               
Cow position:
               
chr11:6202286-6202647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
30-225
               

               
Cow position:
               
chr11:21428153-21427961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
30-356
               

               
Cow position:
               
chr11:39499199-39499515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
30-396
               

               
Cow position:
               
chr11:7273391-7273040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
8, 110
               

               
Conread position:
               
31-383
               

               
Cow position:
               
chr11:22675955-22676299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
32-182
               

               
Cow position:
               
chr11:63499481-63499335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
32-306
               

               
Cow position:
               
chr11:40479012-40478741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 118
               

               
Conread position:
               
32-373
               

               
Cow position:
               
chr11:51729131-51729451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
32-399
               

               
Cow position:
               
chr11:45619192-45619551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
32-400
               

               
Cow position:
               
chr11:2576061-2575705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
32-400
               

               
Cow position:
               
chr11:71390721-71390369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
32-409
               

               
Cow position:
               
chr11:80756941-80756578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
52, 112
               

               
Conread position:
               
32-423
               

               
Cow position:
               
chr11:84385795-84385411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
32-424
               

               
Cow position:
               
chr11:76889891-76890270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
32-428
               

               
Cow position:
               
chr11:42919385-42918986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
32-429
               

               
Cow position:
               
chr11:43360945-43360550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
33-242
               

               
Cow position:
               
chr11:30596830-30597042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
33-378
               

               
Cow position:
               
chr11:259329-258991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
33-395
               

               
Cow position:
               
chr11:48295876-48296227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr11:32126454-32126816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
34-361
               

               
Cow position:
               
chr11:31337225-31337544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
34-389
               

               
Cow position:
               
chr11:35213316-35212978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr11:80556065-80556423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
34-402
               

               
Cow position:
               
chr11:4323200-4323570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr11:63435362-63435733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
35-307
               

               
Cow position:
               
chr11:70278263-70278000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
37-388
               

               
Cow position:
               
chr11:18851766-18852090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
37-408
               

               
Cow position:
               
chr11:32254371-32254004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 108
               

               
Conread position:
               
38-231
               

               
Cow position:
               
chr11:56349167-56348985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
38-275
               

               
Cow position:
               
chr11:52983525-52983757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr11:69015823-69016142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr11:70250774-70251097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
162, 9
               

               
Conread position:
               
38-383
               

               
Cow position:
               
chr11:84228865-84228536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
38-409
               

               
Cow position:
               
chr11:6245170-6245532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
39-379
               

               
Cow position:
               
chr11:6234030-6233695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
39-395
               

               
Cow position:
               
chr11:41134216-41133879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr11:51626813-51626960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
40-373
               

               
Cow position:
               
chr11:21422085-21421761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
40-375
               

               
Cow position:
               
chr11:56675765-56676104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
40-431
               

               
Cow position:
               
chr11:40794503-40794110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
41-259
               

               
Cow position:
               
chr11:61560774-61560566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
41-310
               

               
Cow position:
               
chr11:36635191-36634926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
42-370
               

               
Cow position:
               
chr11:6633562-6633900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
42-387
               

               
Cow position:
               
chr11:287480-287138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
215, 39
               

               
Conread position:
               
43-388
               

               
Cow position:
               
chr11:5201789-5201454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
43-408
               

               
Cow position:
               
chr11:32777542-32777890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
45-387
               

               
Cow position:
               
chr11:18425384-18425048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
213, 36
               

               
Conread position:
               
46-401
               

               
Cow position:
               
chr11:70756334-70756676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
46-408
               

               
Cow position:
               
chr11:7460761-7460411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
47-303
               

               
Cow position:
               
chr11:71807715-71807458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
47-389
               

               
Cow position:
               
chr11:50472173-50472511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
49-386
               

               
Cow position:
               
chr11:69977835-69978155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
49-390
               

               
Cow position:
               
chr11:48659789-48660124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr11:47772533-47772216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
242, 212
               

               
Conread position:
               
50-393
               

               
Cow position:
               
chr11:53510640-53510299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
52-189
               

               
Cow position:
               
chr11:10837668-10837530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
52-190
               

               
Cow position:
               
chr11:32300333-32300471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
52-287
               

               
Cow position:
               
chr11:67246653-67246878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
52-288
               

               
Cow position:
               
chr11:86720551-86720324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
52-315
               

               
Cow position:
               
chr11:69075769-69076031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
52-372
               

               
Cow position:
               
chr11:81135304-81134993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
52-373
               

               
Cow position:
               
chr11:68112402-68112082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
52-383
               

               
Cow position:
               
chr11:67615382-67615065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
52-410
               

               
Cow position:
               
chr11:68555226-68554878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
261, 27
               

               
Conread position:
               
52-429
               

               
Cow position:
               
chr11:23407322-23407697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
53-345
               

               
Cow position:
               
chr11:19233092-19232801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
54-244
               

               
Cow position:
               
chr11:21398826-21399013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
55-379
               

               
Cow position:
               
chr11:70978863-70978552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
56-260
               

               
Cow position:
               
chr11:80537351-80537554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
75, 93
               

               
Conread position:
               
56-363
               

               
Cow position:
               
chr11:85703571-85703856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
56-384
               

               
Cow position:
               
chr11:27907658-27907958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
56-388
               

               
Cow position:
               
chr11:49057267-49057575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
56-388
               

               
Cow position:
               
chr11:62788993-62789321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
56-397
               

               
Cow position:
               
chr11:59024489-59024153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
56-409
               

               
Cow position:
               
chr11:76652887-76653230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
347, 25
               

               
Conread position:
               
56-411
               

               
Cow position:
               
chr11:70206188-70206530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
56-412
               

               
Cow position:
               
chr11:66572636-66572279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
56-417
               

               
Cow position:
               
chr11:52690657-52690303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
56-431
               

               
Cow position:
               
chr11:13864233-13863864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr11:39118618-39118869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 216
               

               
Conread position:
               
57-363
               

               
Cow position:
               
chr11:53462809-53463109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
57-373
               

               
Cow position:
               
chr11:35981278-35980964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
57-425
               

               
Cow position:
               
chr11:40395304-40395663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
57-431
               

               
Cow position:
               
chr11:63999224-63998850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
58-400
               

               
Cow position:
               
chr11:64009586-64009928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
58-402
               

               
Cow position:
               
chr11:61525935-61526282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
58-415
               

               
Cow position:
               
chr11:62742766-62742428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
321, 63
               

               
Conread position:
               
59-363
               

               
Cow position:
               
chr11:47755516-47755213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
60-379
               

               
Cow position:
               
chr11:29308451-29308765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr11:49873017-49872704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
62-398
               

               
Cow position:
               
chr11:32354115-32353783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
64-366
               

               
Cow position:
               
chr11:11994832-11994542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
64-375
               

               
Cow position:
               
chr11:8461888-8462185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
64-395
               

               
Cow position:
               
chr11:261390-261060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
64-395
               

               
Cow position:
               
chr11:13067798-13067473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 199
               

               
Conread position:
               
65-298
               

               
Cow position:
               
chr11:33345317-33345549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
65-384
               

               
Cow position:
               
chr11:81168158-81167843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 175
               

               
Conread position:
               
66-391
               

               
Cow position:
               
chr11:41293944-41293609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
66-399
               

               
Cow position:
               
chr11:13940066-13940390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
66-415
               

               
Cow position:
               
chr11:83032558-83032896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
66-417
               

               
Cow position:
               
chr11:63035301-63034955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
68-379
               

               
Cow position:
               
chr11:64104870-64105176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
68-403
               

               
Cow position:
               
chr11:21507883-21508221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
69-431
               

               
Cow position:
               
chr11:3739831-3740199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
70-307
               

               
Cow position:
               
chr11:65852356-65852589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
70-382
               

               
Cow position:
               
chr11:47311106-47310798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
70-393
               

               
Cow position:
               
chr11:5217587-5217259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
111, 73
               

               
Conread position:
               
73-288
               

               
Cow position:
               
chr11:14466607-14466393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr11:18587725-18587476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 211
               

               
Conread position:
               
75-363
               

               
Cow position:
               
chr11:30728288-30728568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr11:83323461-83323760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
178, 10
               

               
Conread position:
               
79-312
               

               
Cow position:
               
chr11:83033348-83033122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
79-321
               

               
Cow position:
               
chr11:36315285-36315046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
79-379
               

               
Cow position:
               
chr11:48085804-48086101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
126, 151
               

               
Conread position:
               
79-415
               

               
Cow position:
               
chr11:5602340-5602675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 54
               

               
Conread position:
               
82-270
               

               
Cow position:
               
chr11:55203570-55203383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
82-411
               

               
Cow position:
               
chr11:39060708-39060385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
84-373
               

               
Cow position:
               
chr11:17083417-17083136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
84-387
               

               
Cow position:
               
chr11:6642705-6643005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
85-261
               

               
Cow position:
               
chr11:69392452-69392630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
85-297
               

               
Cow position:
               
chr11:65767092-65767303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
201, 46
               

               
Conread position:
               
85-304
               

               
Cow position:
               
chr11:4653083-4652863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
85-310
               

               
Cow position:
               
chr11:26845700-26845479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
85-360
               

               
Cow position:
               
chr11:31874987-31875258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
85-369
               

               
Cow position:
               
chr11:30808707-30808424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 180
               

               
Conread position:
               
85-375
               

               
Cow position:
               
chr11:17036635-17036353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
85-379
               

               
Cow position:
               
chr11:375349-375642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
85-379
               

               
Cow position:
               
chr11:42066755-42067047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
85-390
               

               
Cow position:
               
chr11:8584215-8584510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 154
               

               
Conread position:
               
85-390
               

               
Cow position:
               
chr11:75285873-75285562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
85-391
               

               
Cow position:
               
chr11:30493893-30494183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
85-399
               

               
Cow position:
               
chr11:26275062-26274763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
286, 60
               

               
Conread position:
               
86-362
               

               
Cow position:
               
chr11:8684176-8683912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
86-379
               

               
Cow position:
               
chr11:37919148-37918865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
251, 15
               

               
Conread position:
               
87-379
               

               
Cow position:
               
chr11:32881047-32881328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
87-401
               

               
Cow position:
               
chr11:16314769-16315079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
88-312
               

               
Cow position:
               
chr11:35573591-35573374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
88-373
               

               
Cow position:
               
chr11:80413114-80412832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
88-387
               

               
Cow position:
               
chr11:31024910-31024610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
227, 51
               

               
Conread position:
               
91-400
               

               
Cow position:
               
chr11:58594487-58594183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
92-375
               

               
Cow position:
               
chr11:81159781-81160061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
92-388
               

               
Cow position:
               
chr11:7385339-7385626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
92-390
               

               
Cow position:
               
chr11:42160159-42159871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
92-410
               

               
Cow position:
               
chr11:7330952-7331258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
93-362
               

               
Cow position:
               
chr11:24599487-24599232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 124
               

               
Conread position:
               
93-399
               

               
Cow position:
               
chr11:35665660-35665357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
260, 32
               

               
Conread position:
               
93-420
               

               
Cow position:
               
chr11:30370010-30370320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
94-379
               

               
Cow position:
               
chr11:17676467-17676192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
94-428
               

               
Cow position:
               
chr11:56288451-56288777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
95-379
               

               
Cow position:
               
chr11:62813045-62812769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
95-399
               

               
Cow position:
               
chr11:8669912-8670221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
96-373
               

               
Cow position:
               
chr11:80564198-80564474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
203, 43
               

               
Conread position:
               
96-409
               

               
Cow position:
               
chr11:63396722-63397031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
258, 51
               

               
Conread position:
               
97-373
               

               
Cow position:
               
chr11:4199179-4199451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
211, 45
               

               
Conread position:
               
98-399
               

               
Cow position:
               
chr11:8437782-8437484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
190, 41
               

               
Conread position:
               
99-356
               

               
Cow position:
               
chr11:41280948-41281206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
99-402
               

               
Cow position:
               
chr11:36977714-36978012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
100-309
               

               
Cow position:
               
chr11:35803043-35803251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
100-396
               

               
Cow position:
               
chr11:35536497-35536775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
101-396
               

               
Cow position:
               
chr11:1067532-1067239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
101-397
               

               
Cow position:
               
chr11:7013833-7013526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
163, 86
               

               
Conread position:
               
101-399
               

               
Cow position:
               
chr11:3715146-3715442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
101-399
               

               
Cow position:
               
chr11:36914657-36914363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
102-310
               

               
Cow position:
               
chr11:62778358-62778557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
102-357
               

               
Cow position:
               
chr11:82289486-82289749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
102-359
               

               
Cow position:
               
chr11:35926995-35926746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
102-373
               

               
Cow position:
               
chr11:32398548-32398818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
192, 54
               

               
Conread position:
               
104-383
               

               
Cow position:
               
chr11:33409347-33409079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
104-427
               

               
Cow position:
               
chr11:72870814-72871128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
105-323
               

               
Cow position:
               
chr11:76835716-76835496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
105-344
               

               
Cow position:
               
chr11:31410969-31410732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 177
               

               
Conread position:
               
105-407
               

               
Cow position:
               
chr11:8457988-8457690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 34
               

               
Conread position:
               
109-375
               

               
Cow position:
               
chr11:18910960-18910704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
260, 34
               

               
Conread position:
               
109-385
               

               
Cow position:
               
chr11:83042343-83042051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
109-431
               

               
Cow position:
               
chr11:4052315-4052009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 23
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr11:2344174-2344376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
112-373
               

               
Cow position:
               
chr11:17721883-17721624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
112-400
               

               
Cow position:
               
chr11:62578723-62579005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
114-375
               

               
Cow position:
               
chr11:4637250-4636996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
114-376
               

               
Cow position:
               
chr11:30867104-30867357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
116-388
               

               
Cow position:
               
chr11:57503407-57503672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
187, 29
               

               
Conread position:
               
117-403
               

               
Cow position:
               
chr11:953282-953566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr11:7559925-7560184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
118-400
               

               
Cow position:
               
chr11:20194502-20194219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
120-383
               

               
Cow position:
               
chr11:57608527-57608279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
120-399
               

               
Cow position:
               
chr11:55636301-55636022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
121-425
               

               
Cow position:
               
chr11:22102975-22102673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 162
               

               
Conread position:
               
124-379
               

               
Cow position:
               
chr11:29699768-29699504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
128-421
               

               
Cow position:
               
chr11:1932557-1932261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 153
               

               
Conread position:
               
130-397
               

               
Cow position:
               
chr11:29677139-29677408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
132-363
               

               
Cow position:
               
chr11:39855073-39854855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr11:37989678-37989440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
134-418
               

               
Cow position:
               
chr11:3219906-3220183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
217, 141
               

               
Conread position:
               
135-421
               

               
Cow position:
               
chr11:30172251-30172524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
137-331
               

               
Cow position:
               
chr11:45849554-45849361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
137-393
               

               
Cow position:
               
chr11:20205908-20205660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
244, 142
               

               
Conread position:
               
137-396
               

               
Cow position:
               
chr11:36520816-36521080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
137-401
               

               
Cow position:
               
chr11:30893755-30893492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
137-417
               

               
Cow position:
               
chr11:71854336-71854061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
138-400
               

               
Cow position:
               
chr11:5219215-5218959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
140-413
               

               
Cow position:
               
chr11:62663285-62663031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
142-390
               

               
Cow position:
               
chr11:2639708-2639450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
142-416
               

               
Cow position:
               
chr11:80893730-80894001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
144-409
               

               
Cow position:
               
chr11:4225048-4225304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
235, 61
               

               
Conread position:
               
145-349
               

               
Cow position:
               
chr11:4392404-4392193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
6, 125
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr11:3714777-3715035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
252, 46
               

               
Conread position:
               
146-382
               

               
Cow position:
               
chr11:71935002-71934761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
179, 121
               

               
Conread position:
               
146-386
               

               
Cow position:
               
chr11:34644608-34644847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
146-398
               

               
Cow position:
               
chr11:32710467-32710716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 107
               

               
Conread position:
               
146-401
               

               
Cow position:
               
chr11:25119978-25119734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
146-401
               

               
Cow position:
               
chr11:35443997-35444249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
147-377
               

               
Cow position:
               
chr11:29786544-29786312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
139, 9
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr11:15382549-15382312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr11:18924699-18924930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr11:19119029-19118799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr11:35669998-35669783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr11:41438233-41438002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
147-385
               

               
Cow position:
               
chr11:19657268-19657026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
147-391
               

               
Cow position:
               
chr11:56311642-56311402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
231, 112
               

               
Conread position:
               
147-423
               

               
Cow position:
               
chr11:61675422-61675693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
218, 118
               

               
Conread position:
               
148-380
               

               
Cow position:
               
chr11:18447537-18447317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
148-382
               

               
Cow position:
               
chr11:9237890-9237662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
148-382
               

               
Cow position:
               
chr11:10956918-10956688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
167, 115
               

               
Conread position:
               
148-395
               

               
Cow position:
               
chr11:62811252-62811493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
148-409
               

               
Cow position:
               
chr11:77013739-77013983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
149-379
               

               
Cow position:
               
chr11:35352083-35351850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
149-387
               

               
Cow position:
               
chr11:30964302-30964537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
149-388
               

               
Cow position:
               
chr11:7500698-7500944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
34, 147
               

               
Conread position:
               
149-396
               

               
Cow position:
               
chr11:897629-897864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
149-399
               

               
Cow position:
               
chr11:68883674-68883922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
149-421
               

               
Cow position:
               
chr11:63866703-63866432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
149-423
               

               
Cow position:
               
chr11:62889938-62889664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
229, 130
               

               
Conread position:
               
149-431
               

               
Cow position:
               
chr11:5231697-5231417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
152-387
               

               
Cow position:
               
chr11:21885792-21886020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
152-389
               

               
Cow position:
               
chr11:46922927-46922694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
152-395
               

               
Cow position:
               
chr11:43914252-43914489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
152-398
               

               
Cow position:
               
chr11:54428579-54428821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr11:41213001-41213255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
152-401
               

               
Cow position:
               
chr11:35562678-35562924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
153-375
               

               
Cow position:
               
chr11:39554238-39554009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr11:85571845-85571605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
156-399
               

               
Cow position:
               
chr11:30895040-30894800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
158-396
               

               
Cow position:
               
chr11:32260499-32260731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
169, 30
               

               
Conread position:
               
161-392
               

               
Cow position:
               
chr11:3896731-3896499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
161-399
               

               
Cow position:
               
chr11:66939625-66939387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
161-415
               

               
Cow position:
               
chr11:15369355-15369608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
162-375
               

               
Cow position:
               
chr11:6297111-6296897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 91
               

               
Conread position:
               
162-398
               

               
Cow position:
               
chr11:63975098-63975335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
217, 117
               

               
Conread position:
               
162-401
               

               
Cow position:
               
chr11:34968645-34968409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
162-425
               

               
Cow position:
               
chr11:35923823-35924084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
163-360
               

               
Cow position:
               
chr11:75090249-75090055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
163-368
               

               
Cow position:
               
chr11:21173464-21173265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
163-370
               

               
Cow position:
               
chr11:35109568-35109366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
163-379
               

               
Cow position:
               
chr11:46427438-46427224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 184
               

               
Conread position:
               
163-379
               

               
Cow position:
               
chr11:69417373-69417586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
163-400
               

               
Cow position:
               
chr11:37436017-37435786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
224, 12
               

               
Conread position:
               
163-401
               

               
Cow position:
               
chr11:8259045-8259281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
163-419
               

               
Cow position:
               
chr11:7315179-7314925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
94, 90
               

               
Conread position:
               
164-394
               

               
Cow position:
               
chr11:17638564-17638322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
140, 115
               

               
Conread position:
               
165-379
               

               
Cow position:
               
chr11:2900749-2900530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
165-391
               

               
Cow position:
               
chr11:30843047-30842829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
219, 112
               

               
Conread position:
               
165-398
               

               
Cow position:
               
chr11:55399176-55398948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
217, 10
               

               
Conread position:
               
165-415
               

               
Cow position:
               
chr11:40517144-40516898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
166-408
               

               
Cow position:
               
chr11:45350539-45350298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
167-381
               

               
Cow position:
               
chr11:60486446-60486231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
168-401
               

               
Cow position:
               
chr11:78820126-78820356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
204, 49
               

               
Conread position:
               
168-421
               

               
Cow position:
               
chr11:25603924-25604177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
171-390
               

               
Cow position:
               
chr11:25783690-25783909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
167, 108
               

               
Conread position:
               
173-367
               

               
Cow position:
               
chr11:35149378-35149573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 85
               

               
Conread position:
               
174-401
               

               
Cow position:
               
chr11:25968870-25968650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
175-379
               

               
Cow position:
               
chr11:74427659-74427862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
175-400
               

               
Cow position:
               
chr11:10562990-10563208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 106
               

               
Conread position:
               
175-417
               

               
Cow position:
               
chr11:46884355-46884595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
213, 94
               

               
Conread position:
               
177-379
               

               
Cow position:
               
chr11:35183005-35182804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
177-408
               

               
Cow position:
               
chr11:87172093-87171862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
210, 102
               

               
Conread position:
               
178-373
               

               
Cow position:
               
chr11:68326879-68326685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
178-401
               

               
Cow position:
               
chr11:21830225-21830003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
202, 92
               

               
Conread position:
               
178-411
               

               
Cow position:
               
chr11:47314447-47314210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
179-427
               

               
Cow position:
               
chr11:77017227-77017463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
216, 85
               

               
Conread position:
               
179-427
               

               
Cow position:
               
chr11:86895362-86895604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
207, 100
               

               
Conread position:
               
180-403
               

               
Cow position:
               
chr11:49396539-49396318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
194, 92
               

               
Conread position:
               
181-390
               

               
Cow position:
               
chr11:1980280-1980071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 99
               

               
Conread position:
               
181-401
               

               
Cow position:
               
chr11:12555320-12555101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
191-397
               

               
Cow position:
               
chr11:36092919-36092716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
193-406
               

               
Cow position:
               
chr11:42064225-42064012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
190, 68
               

               
Conread position:
               
194-390
               

               
Cow position:
               
chr11:42084675-42084478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
194-392
               

               
Cow position:
               
chr11:30322492-30322298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
194-396
               

               
Cow position:
               
chr11:36917776-36917566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
194-401
               

               
Cow position:
               
chr11:36361640-36361436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
194-411
               

               
Cow position:
               
chr11:19579015-19578808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
195-372
               

               
Cow position:
               
chr11:2484793-2484620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
195-391
               

               
Cow position:
               
chr11:41278187-41278382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
196-388
               

               
Cow position:
               
chr11:10066351-10066541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr11:34778440-34778244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
202-404
               

               
Cow position:
               
chr11:35733075-35732876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
203-401
               

               
Cow position:
               
chr11:76896365-76896169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
209-379
               

               
Cow position:
               
chr11:32108673-32108505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
210-368
               

               
Cow position:
               
chr11:26343118-26343274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
210-379
               

               
Cow position:
               
chr11:7427924-7427751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
210-388
               

               
Cow position:
               
chr11:20234701-20234878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
210-395
               

               
Cow position:
               
chr11:36847184-36847370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
174, 70
               

               
Conread position:
               
211-379
               

               
Cow position:
               
chr11:4389921-4390086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
211-387
               

               
Cow position:
               
chr11:74152737-74152557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
211-395
               

               
Cow position:
               
chr11:53651658-53651840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
170, 68
               

               
Conread position:
               
211-400
               

               
Cow position:
               
chr11:64781104-64781291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
212-382
               

               
Cow position:
               
chr11:42497863-42498030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
212-391
               

               
Cow position:
               
chr11:46245846-46245663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
212-396
               

               
Cow position:
               
chr11:67538099-67537914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
212-396
               

               
Cow position:
               
chr11:81066031-81065850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
212-400
               

               
Cow position:
               
chr11:35924079-35924265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
212-409
               

               
Cow position:
               
chr11:23220381-23220573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
212-410
               

               
Cow position:
               
chr11:21590404-21590603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr11:73940544-73940355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
215-390
               

               
Cow position:
               
chr11:35544105-35544280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr11:11483333-11483533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 64
               

               
Conread position:
               
217-391
               

               
Cow position:
               
chr11:23278941-23278764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
217-395
               

               
Cow position:
               
chr11:15591451-15591281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr11:32653312-32653514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
218-349
               

               
Cow position:
               
chr11:34136265-34136394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr11:63484962-63485109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
218-375
               

               
Cow position:
               
chr11:60720431-60720276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
218-378
               

               
Cow position:
               
chr11:63475648-63475489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
218-379
               

               
Cow position:
               
chr11:36300557-36300401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
218-379
               

               
Cow position:
               
chr11:60296754-60296921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
218-382
               

               
Cow position:
               
chr11:26442480-26442317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
218-382
               

               
Cow position:
               
chr11:71303603-71303765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
218-386
               

               
Cow position:
               
chr11:79548913-79548743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
218-387
               

               
Cow position:
               
chr11:49486803-49486980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
218-390
               

               
Cow position:
               
chr11:4411844-4411679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
139, 61
               

               
Conread position:
               
218-390
               

               
Cow position:
               
chr11:46010229-46010065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
218-393
               

               
Cow position:
               
chr11:63499105-63498933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
218-398
               

               
Cow position:
               
chr11:5176352-5176178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
218-398
               

               
Cow position:
               
chr11:77241729-77241904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
218-399
               

               
Cow position:
               
chr11:7652042-7651857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
218-400
               

               
Cow position:
               
chr11:79666237-79666058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
218-401
               

               
Cow position:
               
chr11:68570356-68570176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
218-401
               

               
Cow position:
               
chr11:83028018-83028200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
218-402
               

               
Cow position:
               
chr11:47411865-47412048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
158, 48
               

               
Conread position:
               
218-402
               

               
Cow position:
               
chr11:57767214-57767398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
171, 64
               

               
Conread position:
               
218-402
               

               
Cow position:
               
chr11:62102423-62102243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
218-405
               

               
Cow position:
               
chr11:80370138-80370319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
218-408
               

               
Cow position:
               
chr11:47784799-47784989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
218-409
               

               
Cow position:
               
chr11:38836-39031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
218-412
               

               
Cow position:
               
chr11:18777575-18777374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
218-413
               

               
Cow position:
               
chr11:46314035-46314232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
218-414
               

               
Cow position:
               
chr11:67208277-67208470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
163, 52
               

               
Conread position:
               
218-415
               

               
Cow position:
               
chr11:6320108-6319912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
218-415
               

               
Cow position:
               
chr11:17517423-17517617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
218-419
               

               
Cow position:
               
chr11:32782859-32782655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
218-423
               

               
Cow position:
               
chr11:68660590-68660388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
218-431
               

               
Cow position:
               
chr11:33369175-33369388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
170, 61
               

               
Conread position:
               
218-431
               

               
Cow position:
               
chr11:44176620-44176824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
218-431
               

               
Cow position:
               
chr11:76248074-76248282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
160, 56
               

               
Conread position:
               
219-367
               

               
Cow position:
               
chr11:2835884-2836031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
219-379
               

               
Cow position:
               
chr11:37100147-37099989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
219-379
               

               
Cow position:
               
chr11:58048357-58048514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
219-390
               

               
Cow position:
               
chr11:5559307-5559477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
219-390
               

               
Cow position:
               
chr11:25614788-25614609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
219-391
               

               
Cow position:
               
chr11:41140912-41141080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
219-397
               

               
Cow position:
               
chr11:5264122-5264298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
219-397
               

               
Cow position:
               
chr11:21124585-21124407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
161, 61
               

               
Conread position:
               
219-400
               

               
Cow position:
               
chr11:37564899-37565073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
219-412
               

               
Cow position:
               
chr11:12079862-12080058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
219-412
               

               
Cow position:
               
chr11:33373991-33374180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
219-423
               

               
Cow position:
               
chr11:17553055-17552857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
219-424
               

               
Cow position:
               
chr11:32800651-32800855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
180, 50
               

               
Conread position:
               
219-426
               

               
Cow position:
               
chr11:35139934-35140149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
127, 60
               

               
Conread position:
               
219-431
               

               
Cow position:
               
chr11:36136135-36136342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
220-379
               

               
Cow position:
               
chr11:54872733-54872577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
220-379
               

               
Cow position:
               
chr11:63695819-63695655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
220-379
               

               
Cow position:
               
chr11:80008041-80007879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
220-389
               

               
Cow position:
               
chr11:30857064-30857228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
220-390
               

               
Cow position:
               
chr11:74839637-74839796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
220-391
               

               
Cow position:
               
chr11:37041998-37042169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr11:4621404-4621228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
160, 62
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr11:42065676-42065857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr11:49210795-49210612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
220-402
               

               
Cow position:
               
chr11:15366946-15366774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
220-403
               

               
Cow position:
               
chr11:62606443-62606627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
166, 60
               

               
Conread position:
               
220-409
               

               
Cow position:
               
chr11:42236255-42236067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
220-418
               

               
Cow position:
               
chr11:38226269-38226468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
170, 61
               

               
Conread position:
               
220-418
               

               
Cow position:
               
chr11:43965851-43965671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
220-422
               

               
Cow position:
               
chr11:57937166-57936968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
164, 60
               

               
Conread position:
               
221-363
               

               
Cow position:
               
chr11:78672698-78672838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
221-390
               

               
Cow position:
               
chr11:15881393-15881226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
221-398
               

               
Cow position:
               
chr11:64607230-64607045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
221-402
               

               
Cow position:
               
chr11:82725201-82725385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
223-412
               

               
Cow position:
               
chr11:65431548-65431734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
176, 56
               

               
Conread position:
               
223-413
               

               
Cow position:
               
chr11:6429728-6429534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
223-431
               

               
Cow position:
               
chr11:65436250-65436456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
224-378
               

               
Cow position:
               
chr11:73637885-73638037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
224-379
               

               
Cow position:
               
chr11:20117105-20117260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
139, 44
               

               
Conread position:
               
224-379
               

               
Cow position:
               
chr11:30986669-30986819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
224-382
               

               
Cow position:
               
chr11:44016274-44016431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
224-389
               

               
Cow position:
               
chr11:18574825-18574661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
224-390
               

               
Cow position:
               
chr11:51683246-51683410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
224-396
               

               
Cow position:
               
chr11:64096635-64096463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
224-398
               

               
Cow position:
               
chr11:56348800-56348629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
224-418
               

               
Cow position:
               
chr11:17369561-17369750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
163, 55
               

               
Conread position:
               
224-419
               

               
Cow position:
               
chr11:73977270-73977079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 51
               

               
Conread position:
               
224-431
               

               
Cow position:
               
chr11:22884443-22884640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
225-375
               

               
Cow position:
               
chr11:85986018-85985870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
225-400
               

               
Cow position:
               
chr11:26057619-26057444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
226-379
               

               
Cow position:
               
chr11:53888617-53888466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
226-415
               

               
Cow position:
               
chr11:25721964-25721788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
227-379
               

               
Cow position:
               
chr11:12768432-12768579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
227-383
               

               
Cow position:
               
chr11:63407727-63407880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
227-390
               

               
Cow position:
               
chr11:12742457-12742299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 36
               

               
Conread position:
               
227-390
               

               
Cow position:
               
chr11:14492537-14492373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
227-398
               

               
Cow position:
               
chr11:70821078-70821243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
227-409
               

               
Cow position:
               
chr11:64126244-64126425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
227-420
               

               
Cow position:
               
chr11:18119537-18119727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
228-385
               

               
Cow position:
               
chr11:63491052-63491208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
228-395
               

               
Cow position:
               
chr11:8828040-8828206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
228-397
               

               
Cow position:
               
chr11:33271465-33271630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
228-398
               

               
Cow position:
               
chr11:32817782-32817612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 52
               

               
Conread position:
               
228-401
               

               
Cow position:
               
chr11:24551425-24551595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
229-398
               

               
Cow position:
               
chr11:1265508-1265343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
229-423
               

               
Cow position:
               
chr11:28078529-28078717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
149, 50
               

               
Conread position:
               
231-386
               

               
Cow position:
               
chr11:2830694-2830846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
231-396
               

               
Cow position:
               
chr11:69035196-69035358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
232-388
               

               
Cow position:
               
chr11:26823148-26823304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
232-413
               

               
Cow position:
               
chr11:35922159-35921981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
155, 37
               

               
Conread position:
               
232-430
               

               
Cow position:
               
chr11:38657145-38656949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
233-411
               

               
Cow position:
               
chr11:80695203-80695026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
143, 46
               

               
Conread position:
               
236-375
               

               
Cow position:
               
chr11:899476-899615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
237-377
               

               
Cow position:
               
chr11:32584858-32585002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
237-394
               

               
Cow position:
               
chr11:63977101-63977254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
237-401
               

               
Cow position:
               
chr11:23279114-23278945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
237-409
               

               
Cow position:
               
chr11:6784252-6784417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
238-403
               

               
Cow position:
               
chr11:32587079-32586920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
239-379
               

               
Cow position:
               
chr11:53460742-53460881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
239-401
               

               
Cow position:
               
chr11:38643587-38643749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
239-408
               

               
Cow position:
               
chr11:15745040-15744870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
241-397
               

               
Cow position:
               
chr11:65939815-65939659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
242-412
               

               
Cow position:
               
chr11:68592066-68592235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
249-369
               

               
Cow position:
               
chr11:70824658-70824537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
249-377
               

               
Cow position:
               
chr11:43594373-43594247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
255-409
               

               
Cow position:
               
chr11:43737046-43736893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
260-401
               

               
Cow position:
               
chr11:28092514-28092656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
265-390
               

               
Cow position:
               
chr11:22720061-22720190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
267-398
               

               
Cow position:
               
chr11:21637529-21637399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
269-402
               

               
Cow position:
               
chr11:22102685-22102553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
274-394
               

               
Cow position:
               
chr11:41295144-41295025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
284-409
               

               
Cow position:
               
chr11:13684633-13684511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
286-413
               

               
Cow position:
               
chr11:59744086-59744214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
300-401
               

               
Cow position:
               
chr11:50197408-50197307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.