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Cow genome map

           
Conread name:
           
rspc014_m21.y1
        

               
Conread position:
               
1-131
               

               
Cow position:
               
chr16:32132351-32132484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr16:29066994-29067122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr16:30939559-30939696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr16:51531142-51530976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr16:7082907-7082720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:4144890-4145076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr16:44973321-44973508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr16:26500986-26501173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr16:42253742-42253543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr16:47336556-47336756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr16:39417291-39417096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr16:45603505-45603693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:9790805-9790591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr16:45535008-45535231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:13233119-13232882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr16:16548437-16548683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr16:13752298-13752055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr16:54083860-54084113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:7077917-7077647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:32327478-32327757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr16:5845496-5845785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr16:8076682-8076384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr16:17288767-17289073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:37452792-37452482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:5352006-5351708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:8933597-8933294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
65, 144
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr16:28833665-28833980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr16:17626756-17627067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr16:594403-594077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 162
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr16:45456785-45457112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr16:42752686-42753000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr16:54679498-54679821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr16:5836408-5836753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr16:51113051-51112711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:56522647-56522296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr16:3288857-3289194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr16:4192593-4192248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr16:45677026-45676690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr16:33645845-33646203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 6
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr16:14360930-14361286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
34, 144
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr16:13707471-13707849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr16:41752747-41752389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr16:14685563-14685198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr16:23681198-23681555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr16:29380080-29380452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr16:43275848-43276224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr16:4910705-4910325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 151
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr16:22850154-22850525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr16:4857264-4856900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 26
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr16:820077-820451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr16:43105687-43105311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr16:51598777-51598413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr16:52275304-52274935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr16:8193274-8193657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr16:11957758-11957372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr16:47643245-47643638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr16:9932986-9933370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr16:11775224-11774840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 146
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr16:15370505-15370894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 150
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr16:17745661-17746055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr16:35758038-35758412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr16:38709001-38708625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr16:44584604-44584230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr16:38905400-38905010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr16:48398420-48398047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr16:32587025-32587426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr16:45554264-45554647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
35, 137
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr16:8066055-8065666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr16:46433497-46433105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr16:45813875-45813478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr16:7010896-7011295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr16:7976815-7977209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr16:20476362-20476756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr16:47301708-47302103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr16:7542115-7542510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr16:33588494-33588889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr16:23823193-23822800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr16:49126358-49125958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr16:26610464-26610874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr16:37116900-37117309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr16:22772794-22773211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
33, 158
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr16:30910446-30910862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr16:34153748-34153334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr16:7429203-7429621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr16:14754496-14754090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr16:12361146-12360740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr16:30290143-30290558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr16:35188080-35188509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr16:56787952-56787527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
2-134
               

               
Cow position:
               
chr16:33752026-33752158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
2-182
               

               
Cow position:
               
chr16:7928419-7928595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr16:26373124-26372839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr16:30096303-30096014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr16:20634051-20633744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr16:24702679-24703049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr16:7075741-7076120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr16:52169893-52170253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr16:26703091-26702710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr16:31117793-31117410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr16:51710301-51709935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr16:16552389-16552785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr16:7583225-7583620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr16:44147601-44147205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr16:7152346-7151936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr16:56082533-56082122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr16:33229905-33230099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
81, 144
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr16:39237775-39238005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr16:53830757-53830458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr16:7549796-7550101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr16:49229940-49229576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr16:2750823-2751174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr16:23563965-23564338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr16:34168423-34168811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr16:5896247-5896652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr16:7456632-7456216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 147
               

               
Conread position:
               
4-117
               

               
Cow position:
               
chr16:25484197-25484309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
4-119
               

               
Cow position:
               
chr16:7930588-7930706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
4-127
               

               
Cow position:
               
chr16:26342105-26342229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
4-149
               

               
Cow position:
               
chr16:31159745-31159593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr16:11568285-11568110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr16:21904995-21905173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr16:56912888-56912704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr16:13791346-13791540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr16:35168558-35168753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr16:4712734-4712928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr16:7496030-7496225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
4-217
               

               
Cow position:
               
chr16:43537571-43537782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr16:1725255-1725014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 233
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:4981548-4981310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:22860926-22860702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:24672528-24672291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr16:8279956-8279718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
4-260
               

               
Cow position:
               
chr16:35937169-35937419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr16:11105382-11105640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr16:42217857-42217603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr16:53048384-53048643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr16:11102995-11102712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 152
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr16:38119616-38119341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr16:45703145-45702861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr16:14974699-14974432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr16:30037162-30036879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr16:571084-570804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr16:17982313-17982029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 208
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr16:23871818-23871536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr16:4399555-4399852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 145
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr16:4626562-4626274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr16:4902418-4902708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr16:42340029-42340314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr16:48494723-48494431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr16:14758562-14758864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr16:5256829-5257129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr16:35623412-35623117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr16:5363725-5364038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr16:41697258-41696955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr16:42633924-42633607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 190
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr16:28922617-28922911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr16:40562060-40562373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr16:52133686-52133376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chr16:33130292-33130611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
4-331
               

               
Cow position:
               
chr16:17282496-17282811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr16:45609820-45610145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
4-340
               

               
Cow position:
               
chr16:7702364-7702686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr16:48006658-48006331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr16:10592264-10592608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr16:27701408-27701086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr16:42242286-42241942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:20205285-20205646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 280
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr16:25170223-25170577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr16:26676857-26676505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 139
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr16:14568652-14568304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr16:13447092-13447457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 143
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr16:42200723-42201093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr16:53553884-53553528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr16:14106475-14106836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr16:15762330-15761957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr16:29766170-29766514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr16:41530458-41530114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr16:42443985-42444354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr16:45677808-45678171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr16:16402494-16402123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr16:39165073-39165429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr16:7442273-7441902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr16:54579000-54579363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr16:31348938-31348563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr16:8323153-8322796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr16:13611617-13611239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr16:18758011-18757634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr16:29655158-29655514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr16:31978355-31977986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr16:33299222-33299597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr16:56850172-56850548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
39, 142
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr16:50906300-50906679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
4-383
               

               
Cow position:
               
chr16:6887616-6887244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-383
               

               
Cow position:
               
chr16:7418213-7418578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr16:4059192-4059566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr16:19670499-19670151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 49
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr16:42970098-42969714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr16:9615411-9615007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr16:9729037-9729406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr16:24855373-24855742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr16:40333492-40333126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr16:32302163-32301795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr16:54664970-54664592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr16:3047512-3047132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr16:3633124-3633488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr16:4275912-4275532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr16:8366991-8366615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr16:8959230-8958847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr16:16597395-16597770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr16:18354123-18353743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr16:29158961-29159325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr16:238095-238478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr16:17142765-17143155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
31, 146
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr16:11806505-11806868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr16:13689497-13689878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr16:17665466-17665869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr16:50274820-50274435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
4-395
               

               
Cow position:
               
chr16:39695644-39695261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr16:24128534-24128928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr16:4972192-4971803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr16:10040005-10039626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr16:23483121-23483500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr16:34257211-34256817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 160
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr16:55784929-55784531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 145
               

               
Conread position:
               
4-398
               

               
Cow position:
               
chr16:6344079-6343687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
4-398
               

               
Cow position:
               
chr16:13307033-13306651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
4-398
               

               
Cow position:
               
chr16:21450680-21451069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
4-398
               

               
Cow position:
               
chr16:46655114-46655501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr16:33753262-33753653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr16:43308736-43308343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 146
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr16:7665464-7665863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr16:11008174-11008543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr16:2223574-2223172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 281
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr16:49336060-49336446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr16:55683126-55683520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 141
               

               
Conread position:
               
4-403
               

               
Cow position:
               
chr16:47820405-47820801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
4-404
               

               
Cow position:
               
chr16:31558724-31559127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 188
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr16:600778-601171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr16:56231656-56232035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr16:5654341-5654730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr16:13698341-13698748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr16:18205795-18206184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 12
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr16:29557798-29557393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr16:35195777-35195378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
4-411
               

               
Cow position:
               
chr16:3821366-3821764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr16:8026016-8025632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr16:9497449-9497025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
37, 270
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr16:9973669-9973250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 134
               

               
Conread position:
               
4-416
               

               
Cow position:
               
chr16:48385569-48385178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr16:38663879-38663465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr16:591983-591559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr16:29037736-29038158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr16:26649801-26649389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
4-423
               

               
Cow position:
               
chr16:7582545-7582958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
4-425
               

               
Cow position:
               
chr16:53428086-53428508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
4-427
               

               
Cow position:
               
chr16:55042730-55042318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr16:50521308-50521552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr16:56831907-56831630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr16:42345773-42345498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr16:20069658-20069954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr16:3587215-3587515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr16:20025277-20025577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr16:48095931-48095575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:33704638-33705001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 6
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr16:25839449-25839811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr16:9985556-9985190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
5-401
               

               
Cow position:
               
chr16:42079008-42078625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr16:44744308-44743895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 141
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr16:9136007-9136192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr16:51869471-51869757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr16:13969544-13969207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
40, 131
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr16:32781197-32781556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr16:23730104-23729730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 265
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr16:47662548-47662922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr16:38191303-38191685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
6-397
               

               
Cow position:
               
chr16:6016564-6016167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr16:48580762-48581186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr16:42734181-42733793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
9-185
               

               
Cow position:
               
chr16:47620218-47620389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr16:30143375-30143103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 137
               

               
Conread position:
               
9-275
               

               
Cow position:
               
chr16:23738013-23738281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
9-313
               

               
Cow position:
               
chr16:6319032-6319340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
9-313
               

               
Cow position:
               
chr16:15960457-15960153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr16:49217723-49217370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
9-376
               

               
Cow position:
               
chr16:6263022-6262652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 141
               

               
Conread position:
               
9-395
               

               
Cow position:
               
chr16:8068988-8068600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
26, 150
               

               
Conread position:
               
9-396
               

               
Cow position:
               
chr16:46752436-46752054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
9-405
               

               
Cow position:
               
chr16:50078910-50078533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
5, 130
               

               
Conread position:
               
9-420
               

               
Cow position:
               
chr16:24825908-24826331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
10-379
               

               
Cow position:
               
chr16:33198599-33198233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
13-125
               

               
Cow position:
               
chr16:590075-589964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
13-134
               

               
Cow position:
               
chr16:30209591-30209717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
13-141
               

               
Cow position:
               
chr16:16280605-16280475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
13-251
               

               
Cow position:
               
chr16:37380105-37380346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
13-281
               

               
Cow position:
               
chr16:4699140-4698882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
13-282
               

               
Cow position:
               
chr16:53627589-53627322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
13-311
               

               
Cow position:
               
chr16:18141496-18141192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
13-312
               

               
Cow position:
               
chr16:35296911-35297214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
13-313
               

               
Cow position:
               
chr16:5726761-5727065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
13-317
               

               
Cow position:
               
chr16:49169547-49169240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
13-320
               

               
Cow position:
               
chr16:16096574-16096878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
13-344
               

               
Cow position:
               
chr16:11615394-11615078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
13-360
               

               
Cow position:
               
chr16:8231516-8231183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
13-373
               

               
Cow position:
               
chr16:46552652-46552986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
13-379
               

               
Cow position:
               
chr16:50288991-50289357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr16:41590613-41590980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
13-397
               

               
Cow position:
               
chr16:8522557-8522174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 190
               

               
Conread position:
               
13-399
               

               
Cow position:
               
chr16:23058595-23058213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
13-399
               

               
Cow position:
               
chr16:23472585-23472962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
13-405
               

               
Cow position:
               
chr16:48145564-48145179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
13-413
               

               
Cow position:
               
chr16:47245422-47245824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
14-373
               

               
Cow position:
               
chr16:51246787-51247139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
14-401
               

               
Cow position:
               
chr16:38243823-38243438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
15-419
               

               
Cow position:
               
chr16:12273908-12274307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
16-186
               

               
Cow position:
               
chr16:24673045-24672875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
16-231
               

               
Cow position:
               
chr16:30515746-30515533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
16-272
               

               
Cow position:
               
chr16:52789900-52790151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
16-312
               

               
Cow position:
               
chr16:5636430-5636720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
16-313
               

               
Cow position:
               
chr16:43801075-43800780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr16:16265258-16264967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
16-332
               

               
Cow position:
               
chr16:22380514-22380202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
16-361
               

               
Cow position:
               
chr16:3614591-3614919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
16-377
               

               
Cow position:
               
chr16:51500775-51501126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
16-379
               

               
Cow position:
               
chr16:8494156-8493789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 146
               

               
Conread position:
               
16-379
               

               
Cow position:
               
chr16:48956636-48956999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
16-390
               

               
Cow position:
               
chr16:22842214-22841836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
16-390
               

               
Cow position:
               
chr16:45139513-45139876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
16-391
               

               
Cow position:
               
chr16:15824603-15824229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
16-398
               

               
Cow position:
               
chr16:19643732-19644108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
16-402
               

               
Cow position:
               
chr16:51289163-51288781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
16-403
               

               
Cow position:
               
chr16:17945363-17945768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
17-190
               

               
Cow position:
               
chr16:23187116-23187302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr16:23366084-23366352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr16:7498906-7499181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
17-308
               

               
Cow position:
               
chr16:25965339-25965631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chr16:53086487-53086192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
17-332
               

               
Cow position:
               
chr16:25380654-25380340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
17-344
               

               
Cow position:
               
chr16:33226696-33226373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
17-376
               

               
Cow position:
               
chr16:31268983-31269340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
17-380
               

               
Cow position:
               
chr16:1549031-1548680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
17-387
               

               
Cow position:
               
chr16:29608364-29608730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
17-387
               

               
Cow position:
               
chr16:29712262-29712624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
17-390
               

               
Cow position:
               
chr16:47834775-47835132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
17-398
               

               
Cow position:
               
chr16:10148119-10148485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
17-401
               

               
Cow position:
               
chr16:3246364-3245978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
17-414
               

               
Cow position:
               
chr16:14242214-14242605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
17-422
               

               
Cow position:
               
chr16:49125686-49125277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
18-270
               

               
Cow position:
               
chr16:39646393-39646639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
18-307
               

               
Cow position:
               
chr16:48340852-48340562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr16:16564967-16565342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
18-431
               

               
Cow position:
               
chr16:12320065-12320472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
19-183
               

               
Cow position:
               
chr16:23810760-23810919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
19-287
               

               
Cow position:
               
chr16:18402532-18402797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr16:13195494-13195227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr16:21317747-21317467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
19-317
               

               
Cow position:
               
chr16:12633733-12634025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
19-363
               

               
Cow position:
               
chr16:25386825-25387153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
20-328
               

               
Cow position:
               
chr16:54341838-54342138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
20-379
               

               
Cow position:
               
chr16:32970233-32969882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
22-203
               

               
Cow position:
               
chr16:44676721-44676902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
22-401
               

               
Cow position:
               
chr16:42399052-42398669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
24-364
               

               
Cow position:
               
chr16:41578078-41578412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
24-390
               

               
Cow position:
               
chr16:8203954-8203592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
27-398
               

               
Cow position:
               
chr16:37025180-37024809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr16:51696936-51697275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
30-186
               

               
Cow position:
               
chr16:28692862-28692710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
32-180
               

               
Cow position:
               
chr16:39385268-39385415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
32-203
               

               
Cow position:
               
chr16:4372634-4372465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr16:15808835-15809100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
32-312
               

               
Cow position:
               
chr16:10772993-10773256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
32-387
               

               
Cow position:
               
chr16:56510349-56510004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
32-394
               

               
Cow position:
               
chr16:56565456-56565803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
32-396
               

               
Cow position:
               
chr16:5907209-5907578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
33-390
               

               
Cow position:
               
chr16:32523101-32523453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr16:45348247-45348608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr16:8448783-8448438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
34-234
               

               
Cow position:
               
chr16:14699781-14699977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
34-390
               

               
Cow position:
               
chr16:9904955-9905307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
34-399
               

               
Cow position:
               
chr16:46521758-46522110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
34-409
               

               
Cow position:
               
chr16:50282563-50282206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
35-411
               

               
Cow position:
               
chr16:19047575-19047200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
36-398
               

               
Cow position:
               
chr16:30320213-30319849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
37-417
               

               
Cow position:
               
chr16:44210700-44210329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
38-191
               

               
Cow position:
               
chr16:26068796-26068948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
38-249
               

               
Cow position:
               
chr16:18036817-18037023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
38-382
               

               
Cow position:
               
chr16:40446118-40446471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 188
               

               
Conread position:
               
38-403
               

               
Cow position:
               
chr16:33596069-33595725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
38-414
               

               
Cow position:
               
chr16:34998748-34998385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
254, 28
               

               
Conread position:
               
39-354
               

               
Cow position:
               
chr16:33267583-33267896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
39-399
               

               
Cow position:
               
chr16:36121113-36120774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
40-379
               

               
Cow position:
               
chr16:30369221-30369550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
41-401
               

               
Cow position:
               
chr16:12468097-12467741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
41-406
               

               
Cow position:
               
chr16:10032505-10032866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
42-390
               

               
Cow position:
               
chr16:47852725-47852382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
43-356
               

               
Cow position:
               
chr16:13578989-13578678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
43-431
               

               
Cow position:
               
chr16:23955955-23955580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
44-363
               

               
Cow position:
               
chr16:16570784-16571084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
45-356
               

               
Cow position:
               
chr16:46807660-46807361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
45-383
               

               
Cow position:
               
chr16:12108515-12108167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
47-374
               

               
Cow position:
               
chr16:53089467-53089138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
48-227
               

               
Cow position:
               
chr16:24249957-24249778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
49-401
               

               
Cow position:
               
chr16:51241666-51241318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
51-356
               

               
Cow position:
               
chr16:38019990-38020288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr16:11082887-11083196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
52-395
               

               
Cow position:
               
chr16:13483695-13483359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
52-428
               

               
Cow position:
               
chr16:8737943-8738316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
53-379
               

               
Cow position:
               
chr16:56893732-56893415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
54-393
               

               
Cow position:
               
chr16:34754080-34753739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
54-401
               

               
Cow position:
               
chr16:27019955-27020290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
55-390
               

               
Cow position:
               
chr16:55233576-55233888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
56-275
               

               
Cow position:
               
chr16:26323634-26323418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
56-334
               

               
Cow position:
               
chr16:10945549-10945284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
56-363
               

               
Cow position:
               
chr16:48146775-48146470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
56-390
               

               
Cow position:
               
chr16:30662379-30662060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
56-396
               

               
Cow position:
               
chr16:22984640-22984967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 85
               

               
Conread position:
               
56-412
               

               
Cow position:
               
chr16:56173686-56173342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
333, 25
               

               
Conread position:
               
56-419
               

               
Cow position:
               
chr16:43126064-43125707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
56-426
               

               
Cow position:
               
chr16:50409112-50409493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 213
               

               
Conread position:
               
56-427
               

               
Cow position:
               
chr16:4852234-4851860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
56-431
               

               
Cow position:
               
chr16:56796783-56796400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
57-294
               

               
Cow position:
               
chr16:54226715-54226482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr16:17903766-17903513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
57-312
               

               
Cow position:
               
chr16:18052214-18052468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
57-418
               

               
Cow position:
               
chr16:44654390-44654046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
60-397
               

               
Cow position:
               
chr16:33869874-33869533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
61-289
               

               
Cow position:
               
chr16:50667173-50667404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 213
               

               
Conread position:
               
62-312
               

               
Cow position:
               
chr16:43674763-43675010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
62-371
               

               
Cow position:
               
chr16:424924-424617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
233, 84
               

               
Conread position:
               
62-383
               

               
Cow position:
               
chr16:20871915-20872215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
64-275
               

               
Cow position:
               
chr16:31163236-31163027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
64-292
               

               
Cow position:
               
chr16:18745624-18745847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
64-395
               

               
Cow position:
               
chr16:45731499-45731189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
65-362
               

               
Cow position:
               
chr16:27160974-27160670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
65-363
               

               
Cow position:
               
chr16:48917358-48917659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 157
               

               
Conread position:
               
65-422
               

               
Cow position:
               
chr16:13696787-13696435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
66-397
               

               
Cow position:
               
chr16:45121931-45122260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
67-379
               

               
Cow position:
               
chr16:40514587-40514293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
68-303
               

               
Cow position:
               
chr16:10162712-10162948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
68-360
               

               
Cow position:
               
chr16:2417695-2417405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
69-386
               

               
Cow position:
               
chr16:30186539-30186851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
70-407
               

               
Cow position:
               
chr16:50943281-50943614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
73-425
               

               
Cow position:
               
chr16:36286781-36286445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
75-395
               

               
Cow position:
               
chr16:4970785-4971106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
76-395
               

               
Cow position:
               
chr16:35067195-35067517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr16:39516699-39516396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 143
               

               
Conread position:
               
78-413
               

               
Cow position:
               
chr16:44394167-44394520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
79-308
               

               
Cow position:
               
chr16:12501255-12501029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
81-363
               

               
Cow position:
               
chr16:26030975-26030692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr16:12036767-12036500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
85-306
               

               
Cow position:
               
chr16:50008238-50008023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
85-309
               

               
Cow position:
               
chr16:48545733-48545954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
85-360
               

               
Cow position:
               
chr16:42864813-42864554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
85-382
               

               
Cow position:
               
chr16:56874312-56874029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
85-396
               

               
Cow position:
               
chr16:30036147-30036454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
160, 58
               

               
Conread position:
               
85-406
               

               
Cow position:
               
chr16:39777815-39778131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
287, 53
               

               
Conread position:
               
85-409
               

               
Cow position:
               
chr16:21002475-21002142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr16:30359147-30358938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
86-313
               

               
Cow position:
               
chr16:3114451-3114676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
86-379
               

               
Cow position:
               
chr16:44138587-44138291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
86-389
               

               
Cow position:
               
chr16:33054570-33054251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
204, 189
               

               
Conread position:
               
87-307
               

               
Cow position:
               
chr16:34220098-34220315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
87-367
               

               
Cow position:
               
chr16:21381647-21381384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
87-378
               

               
Cow position:
               
chr16:12522972-12523261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
87-379
               

               
Cow position:
               
chr16:45700568-45700280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
87-397
               

               
Cow position:
               
chr16:33134856-33135147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
291, 44
               

               
Conread position:
               
87-410
               

               
Cow position:
               
chr16:17135145-17134831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
87-413
               

               
Cow position:
               
chr16:29527739-29528075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
88-382
               

               
Cow position:
               
chr16:39683184-39682896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
90-399
               

               
Cow position:
               
chr16:44428797-44429095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
55, 181
               

               
Conread position:
               
90-411
               

               
Cow position:
               
chr16:27534007-27534333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
90-423
               

               
Cow position:
               
chr16:15981479-15981149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
91-395
               

               
Cow position:
               
chr16:56671002-56670692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
92-367
               

               
Cow position:
               
chr16:31565823-31565553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
93-313
               

               
Cow position:
               
chr16:9500437-9500661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
53, 194
               

               
Conread position:
               
94-390
               

               
Cow position:
               
chr16:30305893-30305606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
94-401
               

               
Cow position:
               
chr16:8017889-8018177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 45
               

               
Conread position:
               
94-401
               

               
Cow position:
               
chr16:9830368-9830669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
94-405
               

               
Cow position:
               
chr16:16842607-16842304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
94-408
               

               
Cow position:
               
chr16:12542903-12543220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
95-357
               

               
Cow position:
               
chr16:1220260-1220000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
95-360
               

               
Cow position:
               
chr16:40377893-40377631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
96-387
               

               
Cow position:
               
chr16:9552984-9553257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
97-406
               

               
Cow position:
               
chr16:4911504-4911224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
98-330
               

               
Cow position:
               
chr16:45299999-45299765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
194, 34
               

               
Conread position:
               
98-413
               

               
Cow position:
               
chr16:42539664-42539341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
99-382
               

               
Cow position:
               
chr16:47274813-47274521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
100-375
               

               
Cow position:
               
chr16:50395292-50395571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
102-386
               

               
Cow position:
               
chr16:17135657-17135940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
200, 46
               

               
Conread position:
               
102-396
               

               
Cow position:
               
chr16:51610906-51610605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
194, 50
               

               
Conread position:
               
104-373
               

               
Cow position:
               
chr16:42977394-42977668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
113, 99
               

               
Conread position:
               
109-371
               

               
Cow position:
               
chr16:31561688-31561946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
25, 171
               

               
Conread position:
               
109-379
               

               
Cow position:
               
chr16:42433179-42432917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 152
               

               
Conread position:
               
109-387
               

               
Cow position:
               
chr16:11094892-11094616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
155, 38
               

               
Conread position:
               
109-410
               

               
Cow position:
               
chr16:46548340-46548032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
109-414
               

               
Cow position:
               
chr16:47304188-47303880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
109-423
               

               
Cow position:
               
chr16:11135046-11134740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
286, 37
               

               
Conread position:
               
112-368
               

               
Cow position:
               
chr16:11177688-11177943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
112-391
               

               
Cow position:
               
chr16:12379417-12379128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 165
               

               
Conread position:
               
112-397
               

               
Cow position:
               
chr16:45294482-45294764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
113-399
               

               
Cow position:
               
chr16:56243945-56243662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
242, 30
               

               
Conread position:
               
114-388
               

               
Cow position:
               
chr16:31880821-31880543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
150, 24
               

               
Conread position:
               
116-379
               

               
Cow position:
               
chr16:28444545-28444287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
116-390
               

               
Cow position:
               
chr16:8953750-8953462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
116-429
               

               
Cow position:
               
chr16:51795656-51795357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
123-395
               

               
Cow position:
               
chr16:34291342-34291084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
124-418
               

               
Cow position:
               
chr16:7136397-7136106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
128-368
               

               
Cow position:
               
chr16:12010049-12010287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
130-379
               

               
Cow position:
               
chr16:9578537-9578293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
131-382
               

               
Cow position:
               
chr16:15407602-15407353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
132-402
               

               
Cow position:
               
chr16:30935817-30936088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
154, 20
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr16:20921117-20921375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
136-394
               

               
Cow position:
               
chr16:20824438-20824693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
240, 138
               

               
Conread position:
               
137-398
               

               
Cow position:
               
chr16:14841322-14841581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
137-400
               

               
Cow position:
               
chr16:14386558-14386812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
138-395
               

               
Cow position:
               
chr16:31149339-31149594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
139-371
               

               
Cow position:
               
chr16:15905285-15905052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
164, 13
               

               
Conread position:
               
140-420
               

               
Cow position:
               
chr16:17460132-17460419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
141-379
               

               
Cow position:
               
chr16:7723668-7723899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
141-401
               

               
Cow position:
               
chr16:48613509-48613260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
143-410
               

               
Cow position:
               
chr16:18243711-18243969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
235, 9
               

               
Conread position:
               
144-420
               

               
Cow position:
               
chr16:8711227-8710950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
146-379
               

               
Cow position:
               
chr16:18048184-18047952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
146-397
               

               
Cow position:
               
chr16:11660487-11660250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
234, 35
               

               
Conread position:
               
146-398
               

               
Cow position:
               
chr16:11584433-11584184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
147-358
               

               
Cow position:
               
chr16:45108821-45109029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
147-363
               

               
Cow position:
               
chr16:9730234-9730020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
147-367
               

               
Cow position:
               
chr16:34223423-34223640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
207, 84
               

               
Conread position:
               
147-371
               

               
Cow position:
               
chr16:11359123-11359339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
147-375
               

               
Cow position:
               
chr16:15945284-15945056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
147-375
               

               
Cow position:
               
chr16:32893600-32893815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr16:47632834-47633074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
147-388
               

               
Cow position:
               
chr16:32142062-32142301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
147-389
               

               
Cow position:
               
chr16:37401223-37401451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
147-390
               

               
Cow position:
               
chr16:21370215-21369977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 44
               

               
Conread position:
               
147-395
               

               
Cow position:
               
chr16:33236313-33236065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
58, 124
               

               
Conread position:
               
147-401
               

               
Cow position:
               
chr16:49860204-49860452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
147-402
               

               
Cow position:
               
chr16:10161208-10160957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 106
               

               
Conread position:
               
147-414
               

               
Cow position:
               
chr16:11389601-11389339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
147-423
               

               
Cow position:
               
chr16:1582954-1582684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
258, 128
               

               
Conread position:
               
147-427
               

               
Cow position:
               
chr16:18256215-18255933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 236
               

               
Conread position:
               
147-429
               

               
Cow position:
               
chr16:9560523-9560235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
189, 118
               

               
Conread position:
               
148-313
               

               
Cow position:
               
chr16:16625521-16625683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
148-378
               

               
Cow position:
               
chr16:40675650-40675883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
148-382
               

               
Cow position:
               
chr16:52214083-52213851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
148-397
               

               
Cow position:
               
chr16:38244652-38244400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
148-406
               

               
Cow position:
               
chr16:10020508-10020770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
149-367
               

               
Cow position:
               
chr16:31241316-31241104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
149-383
               

               
Cow position:
               
chr16:45046810-45047053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
149-394
               

               
Cow position:
               
chr16:48567506-48567744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
149-414
               

               
Cow position:
               
chr16:16232027-16232293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
150-391
               

               
Cow position:
               
chr16:50678302-50678058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
151-379
               

               
Cow position:
               
chr16:12324431-12324654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
152-309
               

               
Cow position:
               
chr16:22329138-22329294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
152-393
               

               
Cow position:
               
chr16:55965160-55965400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
152-401
               

               
Cow position:
               
chr16:50442525-50442773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
135, 108
               

               
Conread position:
               
152-414
               

               
Cow position:
               
chr16:22318974-22318719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
242, 85
               

               
Conread position:
               
152-417
               

               
Cow position:
               
chr16:45943797-45943529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 125
               

               
Conread position:
               
152-417
               

               
Cow position:
               
chr16:52389597-52389867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
152-420
               

               
Cow position:
               
chr16:52357562-52357302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
153-396
               

               
Cow position:
               
chr16:29814951-29815189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
153-402
               

               
Cow position:
               
chr16:24895264-24895515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 138
               

               
Conread position:
               
153-408
               

               
Cow position:
               
chr16:29026186-29026445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
152, 62
               

               
Conread position:
               
154-390
               

               
Cow position:
               
chr16:31575123-31575358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
154-397
               

               
Cow position:
               
chr16:53451684-53451924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
205, 126
               

               
Conread position:
               
157-409
               

               
Cow position:
               
chr16:5285876-5286131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 80
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr16:56821583-56821788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
158-415
               

               
Cow position:
               
chr16:9280135-9279869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 118
               

               
Conread position:
               
159-334
               

               
Cow position:
               
chr16:43185281-43185454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
159-382
               

               
Cow position:
               
chr16:35074546-35074768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
161-402
               

               
Cow position:
               
chr16:9596356-9596588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
227, 102
               

               
Conread position:
               
162-313
               

               
Cow position:
               
chr16:52364926-52365074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
162-382
               

               
Cow position:
               
chr16:6609517-6609306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
162-386
               

               
Cow position:
               
chr16:11628952-11629175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
162-388
               

               
Cow position:
               
chr16:13996208-13995987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
162-390
               

               
Cow position:
               
chr16:56615519-56615291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr16:55613517-55613286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 91
               

               
Conread position:
               
162-401
               

               
Cow position:
               
chr16:18573067-18572834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
162-402
               

               
Cow position:
               
chr16:26843713-26843950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
216, 48
               

               
Conread position:
               
162-408
               

               
Cow position:
               
chr16:13886473-13886228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
163-368
               

               
Cow position:
               
chr16:33632687-33632489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
163-370
               

               
Cow position:
               
chr16:7812678-7812884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
163-379
               

               
Cow position:
               
chr16:50286501-50286713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
163-390
               

               
Cow position:
               
chr16:11003577-11003351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
163-394
               

               
Cow position:
               
chr16:14376770-14376997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
211, 52
               

               
Conread position:
               
163-400
               

               
Cow position:
               
chr16:35297394-35297622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
163-404
               

               
Cow position:
               
chr16:24142971-24142727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
5, 55
               

               
Conread position:
               
163-409
               

               
Cow position:
               
chr16:5382166-5382413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 222
               

               
Conread position:
               
163-425
               

               
Cow position:
               
chr16:34728725-34728989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
164-389
               

               
Cow position:
               
chr16:31484673-31484457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
165-379
               

               
Cow position:
               
chr16:12220671-12220886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
140, 105
               

               
Conread position:
               
165-397
               

               
Cow position:
               
chr16:258292-258067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
165-401
               

               
Cow position:
               
chr16:8090542-8090308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
165-431
               

               
Cow position:
               
chr16:10171528-10171791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
168-418
               

               
Cow position:
               
chr16:10122509-10122262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
144, 111
               

               
Conread position:
               
169-400
               

               
Cow position:
               
chr16:23811118-23811351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
188, 30
               

               
Conread position:
               
169-428
               

               
Cow position:
               
chr16:27051039-27051302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
206, 103
               

               
Conread position:
               
171-388
               

               
Cow position:
               
chr16:39030103-39029883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 104
               

               
Conread position:
               
171-393
               

               
Cow position:
               
chr16:30908951-30908734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
207, 103
               

               
Conread position:
               
175-375
               

               
Cow position:
               
chr16:16025436-16025640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
175-379
               

               
Cow position:
               
chr16:15714109-15714312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
175-390
               

               
Cow position:
               
chr16:10249819-10249605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
175-428
               

               
Cow position:
               
chr16:22776422-22776171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
178-388
               

               
Cow position:
               
chr16:28199032-28199239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
201, 23
               

               
Conread position:
               
178-395
               

               
Cow position:
               
chr16:7928382-7928164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
203, 101
               

               
Conread position:
               
178-430
               

               
Cow position:
               
chr16:3032714-3032461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
179-390
               

               
Cow position:
               
chr16:12091659-12091441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 96
               

               
Conread position:
               
179-398
               

               
Cow position:
               
chr16:10011845-10011630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
179-398
               

               
Cow position:
               
chr16:12507258-12507038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
195, 101
               

               
Conread position:
               
179-399
               

               
Cow position:
               
chr16:40029880-40029665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
179-399
               

               
Cow position:
               
chr16:45193805-45193584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
198, 96
               

               
Conread position:
               
183-388
               

               
Cow position:
               
chr16:44144396-44144600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
184-390
               

               
Cow position:
               
chr16:8083922-8083716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
185-425
               

               
Cow position:
               
chr16:42038072-42038308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
190-387
               

               
Cow position:
               
chr16:22972760-22972562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
193-372
               

               
Cow position:
               
chr16:51143817-51143992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
194-367
               

               
Cow position:
               
chr16:4507715-4507879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
194-367
               

               
Cow position:
               
chr16:15023612-15023446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
194-394
               

               
Cow position:
               
chr16:28979851-28980048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
194-395
               

               
Cow position:
               
chr16:33290403-33290602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
194-397
               

               
Cow position:
               
chr16:12251039-12251240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
194-407
               

               
Cow position:
               
chr16:17180178-17180385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
195-399
               

               
Cow position:
               
chr16:21044316-21044517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
196-390
               

               
Cow position:
               
chr16:33302205-33302396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
196-399
               

               
Cow position:
               
chr16:9017894-9018096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
196-401
               

               
Cow position:
               
chr16:38581023-38581227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
201-370
               

               
Cow position:
               
chr16:27759580-27759409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
206-376
               

               
Cow position:
               
chr16:46184188-46184358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
147, 74
               

               
Conread position:
               
209-393
               

               
Cow position:
               
chr16:56595356-56595173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
210-388
               

               
Cow position:
               
chr16:11019480-11019306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
210-388
               

               
Cow position:
               
chr16:33073846-33073677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
210-390
               

               
Cow position:
               
chr16:18668995-18669172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
210-401
               

               
Cow position:
               
chr16:12091691-12091879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
210-412
               

               
Cow position:
               
chr16:30211489-30211683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
170, 64
               

               
Conread position:
               
210-413
               

               
Cow position:
               
chr16:25419219-25419019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
210-419
               

               
Cow position:
               
chr16:38743059-38743269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
211-402
               

               
Cow position:
               
chr16:11775958-11775773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
166, 64
               

               
Conread position:
               
211-413
               

               
Cow position:
               
chr16:3938975-3938774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
167, 73
               

               
Conread position:
               
212-379
               

               
Cow position:
               
chr16:32426687-32426525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
212-391
               

               
Cow position:
               
chr16:33717090-33717268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
212-394
               

               
Cow position:
               
chr16:336551-336370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
212-394
               

               
Cow position:
               
chr16:6026961-6026784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
212-395
               

               
Cow position:
               
chr16:48455716-48455890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
172, 38
               

               
Conread position:
               
212-398
               

               
Cow position:
               
chr16:16542886-16543072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
212-426
               

               
Cow position:
               
chr16:13796305-13796513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
215-426
               

               
Cow position:
               
chr16:11467639-11467851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
217-413
               

               
Cow position:
               
chr16:56912646-56912455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
84, 49
               

               
Conread position:
               
218-360
               

               
Cow position:
               
chr16:23187587-23187734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
218-363
               

               
Cow position:
               
chr16:11654085-11654228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
218-375
               

               
Cow position:
               
chr16:15949465-15949312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
218-379
               

               
Cow position:
               
chr16:38355386-38355231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
218-379
               

               
Cow position:
               
chr16:50569306-50569460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
218-386
               

               
Cow position:
               
chr16:28233262-28233098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
218-389
               

               
Cow position:
               
chr16:20614541-20614706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
218-390
               

               
Cow position:
               
chr16:29311566-29311739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
218-391
               

               
Cow position:
               
chr16:4277511-4277337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 61
               

               
Conread position:
               
218-395
               

               
Cow position:
               
chr16:8810051-8809881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
218-398
               

               
Cow position:
               
chr16:9097066-9097242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
218-398
               

               
Cow position:
               
chr16:22323768-22323589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
154, 52
               

               
Conread position:
               
218-398
               

               
Cow position:
               
chr16:38384446-38384269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
156, 49
               

               
Conread position:
               
218-398
               

               
Cow position:
               
chr16:45278579-45278757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
218-402
               

               
Cow position:
               
chr16:24674635-24674450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 154
               

               
Conread position:
               
218-410
               

               
Cow position:
               
chr16:42107672-42107861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
186, 51
               

               
Conread position:
               
218-411
               

               
Cow position:
               
chr16:24202824-24202630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
218-411
               

               
Cow position:
               
chr16:30581076-30580887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
218-412
               

               
Cow position:
               
chr16:52325556-52325361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
160, 61
               

               
Conread position:
               
218-416
               

               
Cow position:
               
chr16:8288904-8288715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
218-417
               

               
Cow position:
               
chr16:14343622-14343819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
218-425
               

               
Cow position:
               
chr16:27327082-27326878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
218-429
               

               
Cow position:
               
chr16:30646555-30646757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
218-431
               

               
Cow position:
               
chr16:10032905-10033120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
170, 61
               

               
Conread position:
               
219-359
               

               
Cow position:
               
chr16:43866804-43866666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
219-363
               

               
Cow position:
               
chr16:9242245-9242392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
219-373
               

               
Cow position:
               
chr16:37154260-37154418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
219-379
               

               
Cow position:
               
chr16:43758602-43758446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
219-383
               

               
Cow position:
               
chr16:9987024-9986852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
219-388
               

               
Cow position:
               
chr16:56614564-56614726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
219-389
               

               
Cow position:
               
chr16:24672819-24672650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
219-390
               

               
Cow position:
               
chr16:8469721-8469891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
219-394
               

               
Cow position:
               
chr16:17617319-17617143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
164, 60
               

               
Conread position:
               
219-396
               

               
Cow position:
               
chr16:21442567-21442394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
219-398
               

               
Cow position:
               
chr16:51531368-51531193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
219-408
               

               
Cow position:
               
chr16:19282049-19282238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
159, 60
               

               
Conread position:
               
219-415
               

               
Cow position:
               
chr16:11365016-11364821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
219-420
               

               
Cow position:
               
chr16:10140382-10140578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
220-378
               

               
Cow position:
               
chr16:23515721-23515567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
220-379
               

               
Cow position:
               
chr16:49734101-49733945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
220-380
               

               
Cow position:
               
chr16:48130350-48130195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
220-383
               

               
Cow position:
               
chr16:24138707-24138546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
157, 40
               

               
Conread position:
               
220-395
               

               
Cow position:
               
chr16:5396772-5396599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
156, 59
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr16:13906401-13906230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
161, 7
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr16:43909794-43909614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
220-405
               

               
Cow position:
               
chr16:42992261-42992444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
220-422
               

               
Cow position:
               
chr16:31011372-31011567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
220-426
               

               
Cow position:
               
chr16:7343385-7343186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
221-375
               

               
Cow position:
               
chr16:53004149-53003996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
221-385
               

               
Cow position:
               
chr16:41696054-41696212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
221-410
               

               
Cow position:
               
chr16:51393345-51393153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
221-424
               

               
Cow position:
               
chr16:27117350-27117555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
221-431
               

               
Cow position:
               
chr16:12458039-12457832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
224-367
               

               
Cow position:
               
chr16:33458629-33458768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
224-393
               

               
Cow position:
               
chr16:20270130-20270295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
224-397
               

               
Cow position:
               
chr16:30055053-30054884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
224-402
               

               
Cow position:
               
chr16:56198761-56198942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
224-407
               

               
Cow position:
               
chr16:4616634-4616457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
224-415
               

               
Cow position:
               
chr16:33411744-33411932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
224-417
               

               
Cow position:
               
chr16:19478716-19478535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
224-420
               

               
Cow position:
               
chr16:42253352-42253163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
224-428
               

               
Cow position:
               
chr16:43712506-43712708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
224-431
               

               
Cow position:
               
chr16:13053598-13053803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
225-415
               

               
Cow position:
               
chr16:21974914-21974722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
227-383
               

               
Cow position:
               
chr16:45603798-45603952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
227-389
               

               
Cow position:
               
chr16:26842798-26842960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
227-417
               

               
Cow position:
               
chr16:28775669-28775479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
227-427
               

               
Cow position:
               
chr16:11916162-11915952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
228-368
               

               
Cow position:
               
chr16:41653026-41653161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
230-431
               

               
Cow position:
               
chr16:24203103-24202905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
232-412
               

               
Cow position:
               
chr16:16935461-16935292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
234-403
               

               
Cow position:
               
chr16:23033886-23034053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
235-411
               

               
Cow position:
               
chr16:30368767-30368593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
236-367
               

               
Cow position:
               
chr16:7270477-7270347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
237-411
               

               
Cow position:
               
chr16:16477263-16477434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
238-379
               

               
Cow position:
               
chr16:51216983-51216845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
238-387
               

               
Cow position:
               
chr16:56690076-56689925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
241-427
               

               
Cow position:
               
chr16:12096789-12096602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
259-408
               

               
Cow position:
               
chr16:37372823-37372970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 20
               

               
Conread position:
               
264-402
               

               
Cow position:
               
chr16:11922921-11922782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
266-405
               

               
Cow position:
               
chr16:19720730-19720590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
268-398
               

               
Cow position:
               
chr16:25610115-25610243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
268-413
               

               
Cow position:
               
chr16:31471768-31471915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
269-400
               

               
Cow position:
               
chr16:39646706-39646831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr16:12074030-12074190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
270-397
               

               
Cow position:
               
chr16:7727953-7727820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
272-410
               

               
Cow position:
               
chr16:27003965-27004105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
274-395
               

               
Cow position:
               
chr16:11634766-11634887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-401
               

               
Cow position:
               
chr16:14721821-14721696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
280-400
               

               
Cow position:
               
chr16:17209203-17209080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
286-409
               

               
Cow position:
               
chr16:30596385-30596264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
286-412
               

               
Cow position:
               
chr16:54692886-54693012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.