Cow genome map

Conread name: rspc014_m21.y1

Conread position: 1-126
Cow position: chrX:25411693-25411821 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 48

Conread position: 1-126
Cow position: chrX:38967503-38967628 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 82, 52

Conread position: 1-141
Cow position: chrX:21665741-21665599 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 122

Conread position: 1-159
Cow position: chrX:35609839-35610002 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 60

Conread position: 1-173
Cow position: chrX:23497812-23497643 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 54

Conread position: 1-173
Cow position: chrX:41167112-41166938 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 58

Conread position: 1-181
Cow position: chrX:26285832-26286013 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 103

Conread position: 1-189
Cow position: chrX:40647830-40648026 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 153

Conread position: 1-190
Cow position: chrX:4091500-4091681 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 133

Conread position: 1-190
Cow position: chrX:14924852-14925041 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 148

Conread position: 1-190
Cow position: chrX:29509591-29509397 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 152

Conread position: 1-198
Cow position: chrX:15139692-15139498 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 53

Conread position: 1-202
Cow position: chrX:41743765-41743968 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 21

Conread position: 1-203
Cow position: chrX:26876030-26875827 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 57

Conread position: 1-227
Cow position: chrX:24105479-24105702 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 85

Conread position: 1-252
Cow position: chrX:27680254-27680501 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 15

Conread position: 1-261
Cow position: chrX:47301051-47300791 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 86

Conread position: 1-261
Cow position: chrX:48195188-48194923 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 153

Conread position: 1-261
Cow position: chrX:48571140-48570876 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 132

Conread position: 1-270
Cow position: chrX:11082761-11082501 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 52

Conread position: 1-277
Cow position: chrX:39558494-39558221 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 83, 55

Conread position: 1-280
Cow position: chrX:7571759-7572037 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 15

Conread position: 1-293
Cow position: chrX:11073336-11073049 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 49

Conread position: 1-294
Cow position: chrX:43527356-43527652 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 151

Conread position: 1-294
Cow position: chrX:43779995-43779708 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 47

Conread position: 1-307
Cow position: chrX:20697754-20697454 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 35, 110

Conread position: 1-309
Cow position: chrX:878520-878221 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 10

Conread position: 1-309
Cow position: chrX:32171031-32170730 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 15

Conread position: 1-312
Cow position: chrX:10394245-10393948 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 80

Conread position: 1-312
Cow position: chrX:17725827-17726138 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 57

Conread position: 1-313
Cow position: chrX:11717930-11717618 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 8

Conread position: 1-313
Cow position: chrX:27516385-27516683 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 35

Conread position: 1-313
Cow position: chrX:29680407-29680099 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 57

Conread position: 1-321
Cow position: chrX:47166034-47165714 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 21, 78

Conread position: 1-324
Cow position: chrX:5017560-5017246 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 14

Conread position: 1-331
Cow position: chrX:40809539-40809873 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 151

Conread position: 1-341
Cow position: chrX:28866143-28865814 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 119, 50

Conread position: 1-354
Cow position: chrX:1055537-1055178 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 11

Conread position: 1-359
Cow position: chrX:46771117-46770754 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 245
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 132

Conread position: 1-365
Cow position: chrX:36975802-36976166 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 1-367
Cow position: chrX:7336681-7337063 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 238
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 55

Conread position: 1-367
Cow position: chrX:27227976-27228345 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 151

Conread position: 1-368
Cow position: chrX:9635328-9634975 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 50

Conread position: 1-368
Cow position: chrX:13868546-13868921 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 38, 157

Conread position: 1-368
Cow position: chrX:32820881-32821257 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 146

Conread position: 1-368
Cow position: chrX:34543639-34544003 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 1-373
Cow position: chrX:17794838-17795201 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 48

Conread position: 1-375
Cow position: chrX:842011-842380 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 142

Conread position: 1-378
Cow position: chrX:8925558-8925907 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 25

Conread position: 1-378
Cow position: chrX:47186468-47186099 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 58

Conread position: 1-379
Cow position: chrX:6413897-6414260 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 33, 137

Conread position: 1-379
Cow position: chrX:12249656-12250043 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 35, 57

Conread position: 1-379
Cow position: chrX:13912933-13913303 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 22

Conread position: 1-379
Cow position: chrX:33855380-33854998 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 263
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 152

Conread position: 1-380
Cow position: chrX:31442969-31442610 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 58

Conread position: 1-383
Cow position: chrX:27509167-27508792 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 1-383
Cow position: chrX:28847026-28846661 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 83, 55

Conread position: 1-386
Cow position: chrX:11633531-11633918 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 149

Conread position: 1-389
Cow position: chrX:36355968-36356343 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 83

Conread position: 1-395
Cow position: chrX:4632998-4632606 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 8

Conread position: 1-396
Cow position: chrX:13177612-13177240 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 57

Conread position: 1-398
Cow position: chrX:31949078-31948688 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 15

Conread position: 1-400
Cow position: chrX:15147335-15146947 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 1-401
Cow position: chrX:21064137-21064535 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 269
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 8

Conread position: 1-401
Cow position: chrX:27432061-27431675 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 57

Conread position: 1-401
Cow position: chrX:32420071-32420458 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 58

Conread position: 1-402
Cow position: chrX:4269214-4268819 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 135

Conread position: 1-402
Cow position: chrX:34441599-34441205 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 64

Conread position: 1-403
Cow position: chrX:870313-869930 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 268
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 22

Conread position: 1-412
Cow position: chrX:11844394-11843974 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 282
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 38, 86

Conread position: 1-415
Cow position: chrX:20887793-20887388 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 90

Conread position: 1-415
Cow position: chrX:32020269-32019872 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 281
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 137

Conread position: 1-420
Cow position: chrX:3579797-3580216 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 58

Conread position: 1-421
Cow position: chrX:20677224-20677636 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 1-424
Cow position: chrX:40132356-40132784 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 272
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 15

Conread position: 1-426
Cow position: chrX:6544109-6544520 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 289
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 31, 57

Conread position: 1-426
Cow position: chrX:38963959-38964369 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 49

Conread position: 1-428
Cow position: chrX:18695067-18694646 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 296
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 82, 54

Conread position: 1-429
Cow position: chrX:35885877-35885453 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 127

Conread position: 2-189
Cow position: chrX:12115893-12116087 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 152

Conread position: 2-256
Cow position: chrX:11856282-11856537 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 57

Conread position: 2-275
Cow position: chrX:37574710-37574966 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 2-310
Cow position: chrX:9416839-9416526 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 33, 56

Conread position: 2-310
Cow position: chrX:33639825-33640135 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 30, 86

Conread position: 2-373
Cow position: chrX:21986438-21986079 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 88

Conread position: 2-376
Cow position: chrX:35268741-35269081 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 326, 33

Conread position: 2-394
Cow position: chrX:23514161-23513765 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 56

Conread position: 2-397
Cow position: chrX:43049913-43050316 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 265
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 255

Conread position: 2-406
Cow position: chrX:27394160-27393762 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 28

Conread position: 2-423
Cow position: chrX:15485773-15485357 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 282
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 33, 134

Conread position: 3-134
Cow position: chrX:36723236-36723102 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 64

Conread position: 3-175
Cow position: chrX:35969224-35969060 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 18

Conread position: 3-189
Cow position: chrX:8070843-8070659 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 145

Conread position: 3-201
Cow position: chrX:41198959-41199158 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 104

Conread position: 3-313
Cow position: chrX:13382184-13382488 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 53

Conread position: 3-316
Cow position: chrX:34401853-34402173 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 55

Conread position: 3-375
Cow position: chrX:4279256-4278894 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 62

Conread position: 3-402
Cow position: chrX:29723596-29724003 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 3-405
Cow position: chrX:44054656-44055057 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 135

Conread position: 4-131
Cow position: chrX:46315521-46315392 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 52

Conread position: 4-133
Cow position: chrX:14003785-14003654 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 54

Conread position: 4-134
Cow position: chrX:19188796-19188926 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 49

Conread position: 4-134
Cow position: chrX:43049204-43049337 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 52

Conread position: 4-140
Cow position: chrX:19019251-19019110 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 4-149
Cow position: chrX:35388046-35387900 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 54

Conread position: 4-149
Cow position: chrX:42461886-42461739 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 45

Conread position: 4-172
Cow position: chrX:28157354-28157523 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 71

Conread position: 4-182
Cow position: chrX:38439334-38439514 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 31, 54

Conread position: 4-183
Cow position: chrX:10278670-10278845 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 25

Conread position: 4-185
Cow position: chrX:19015300-19015473 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 79, 22

Conread position: 4-185
Cow position: chrX:36961495-36961677 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 28, 141

Conread position: 4-189
Cow position: chrX:28836042-28835862 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 4-203
Cow position: chrX:7718714-7718903 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 52

Conread position: 4-203
Cow position: chrX:13785507-13785306 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 54

Conread position: 4-203
Cow position: chrX:28105780-28105972 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 80, 46

Conread position: 4-228
Cow position: chrX:11589732-11589509 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 55

Conread position: 4-239
Cow position: chrX:12405531-12405291 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 147

Conread position: 4-245
Cow position: chrX:26440920-26440689 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 52

Conread position: 4-249
Cow position: chrX:2467739-2467984 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 117

Conread position: 4-261
Cow position: chrX:21004541-21004796 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 51

Conread position: 4-261
Cow position: chrX:46722881-46722622 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 131

Conread position: 4-261
Cow position: chrX:47303020-47302765 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 81

Conread position: 4-261
Cow position: chrX:48652867-48652609 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 110

Conread position: 4-282
Cow position: chrX:37232269-37232539 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 31, 54

Conread position: 4-287
Cow position: chrX:10412129-10411847 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 31, 54

Conread position: 4-296
Cow position: chrX:29289436-29289724 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 29, 61

Conread position: 4-297
Cow position: chrX:3130441-3130718 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 4-301
Cow position: chrX:23583418-23583712 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 97

Conread position: 4-301
Cow position: chrX:30543431-30543134 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 192
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 35

Conread position: 4-302
Cow position: chrX:31311885-31312181 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 54

Conread position: 4-309
Cow position: chrX:28134206-28134497 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 51

Conread position: 4-310
Cow position: chrX:8797107-8797409 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 32, 53

Conread position: 4-312
Cow position: chrX:46433342-46433652 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 146

Conread position: 4-313
Cow position: chrX:619148-618847 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 54

Conread position: 4-313
Cow position: chrX:11085201-11084900 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 55

Conread position: 4-313
Cow position: chrX:43730355-43730061 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 26

Conread position: 4-319
Cow position: chrX:38006908-38006603 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 31, 54

Conread position: 4-324
Cow position: chrX:28878308-28878001 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 80, 26

Conread position: 4-332
Cow position: chrX:4043991-4043675 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 278, 31

Conread position: 4-334
Cow position: chrX:31252274-31252591 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 31, 54

Conread position: 4-341
Cow position: chrX:47046659-47046323 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 138

Conread position: 4-344
Cow position: chrX:34662989-34662653 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 56, 34

Conread position: 4-347
Cow position: chrX:16416366-16416697 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 80

Conread position: 4-350
Cow position: chrX:24288073-24287732 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 37

Conread position: 4-360
Cow position: chrX:34502778-34503138 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 141

Conread position: 4-361
Cow position: chrX:35542751-35543094 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 4-362
Cow position: chrX:9360742-9361095 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 231
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 70

Conread position: 4-362
Cow position: chrX:47344154-47344510 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 57, 78

Conread position: 4-363
Cow position: chrX:8899884-8900231 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 27, 120

Conread position: 4-366
Cow position: chrX:5680075-5679715 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 32

Conread position: 4-366
Cow position: chrX:29545022-29544671 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 4-367
Cow position: chrX:10831637-10831265 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 55

Conread position: 4-367
Cow position: chrX:15596897-15597244 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 83

Conread position: 4-370
Cow position: chrX:20151701-20152067 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 217

Conread position: 4-371
Cow position: chrX:17662737-17662373 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 248
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 30, 54

Conread position: 4-371
Cow position: chrX:38642117-38642462 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 54

Conread position: 4-371
Cow position: chrX:40269344-40269728 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 31, 54

Conread position: 4-372
Cow position: chrX:35273212-35273593 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 250
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 31, 54

Conread position: 4-373
Cow position: chrX:15007294-15006937 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 55

Conread position: 4-373
Cow position: chrX:22482829-22482467 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 247
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 22

Conread position: 4-373
Cow position: chrX:29601973-29601607 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 53

Conread position: 4-373
Cow position: chrX:37781258-37780890 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 4-375
Cow position: chrX:1616188-1615834 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 147

Conread position: 4-375
Cow position: chrX:37836447-37836805 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 49

Conread position: 4-379
Cow position: chrX:3654464-3654831 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 248
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 60

Conread position: 4-379
Cow position: chrX:9252319-9251935 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 4-379
Cow position: chrX:31250249-31250618 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 4-379
Cow position: chrX:34313889-34314249 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 35

Conread position: 4-379
Cow position: chrX:34792451-34792095 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 53

Conread position: 4-379
Cow position: chrX:38094667-38094298 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 214

Conread position: 4-379
Cow position: chrX:38218567-38218941 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 4-379
Cow position: chrX:40035584-40035214 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 52

Conread position: 4-379
Cow position: chrX:40557825-40557430 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 141

Conread position: 4-379
Cow position: chrX:41122926-41123273 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 48

Conread position: 4-379
Cow position: chrX:45430157-45429803 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 246
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 30

Conread position: 4-379
Cow position: chrX:47280076-47279708 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 157

Conread position: 4-379
Cow position: chrX:48010454-48010833 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 245
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 26, 147

Conread position: 4-382
Cow position: chrX:36283205-36283571 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 136

Conread position: 4-382
Cow position: chrX:38549308-38549678 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 55

Conread position: 4-383
Cow position: chrX:46032862-46032495 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 254
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 84, 26

Conread position: 4-384
Cow position: chrX:10252324-10251969 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 255
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 25

Conread position: 4-386
Cow position: chrX:9201406-9201778 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 4-386
Cow position: chrX:26492862-26493243 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 64

Conread position: 4-387
Cow position: chrX:11655948-11656314 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 52

Conread position: 4-389
Cow position: chrX:16762622-16763007 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 85

Conread position: 4-390
Cow position: chrX:20584178-20584550 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 56

Conread position: 4-390
Cow position: chrX:25207987-25207622 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 31, 120

Conread position: 4-390
Cow position: chrX:27174851-27175239 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 4-390
Cow position: chrX:27442696-27442299 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 35

Conread position: 4-390
Cow position: chrX:45502008-45502375 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 62

Conread position: 4-391
Cow position: chrX:161272-161639 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 29

Conread position: 4-394
Cow position: chrX:8869546-8869158 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 4-394
Cow position: chrX:35822198-35822574 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 61

Conread position: 4-394
Cow position: chrX:37489581-37489972 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 85

Conread position: 4-396
Cow position: chrX:12979971-12979589 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 47

Conread position: 4-398
Cow position: chrX:12290586-12290962 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 4-398
Cow position: chrX:36061011-36061405 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 31, 145

Conread position: 4-398
Cow position: chrX:45110515-45110898 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 31, 42

Conread position: 4-399
Cow position: chrX:5872173-5872582 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 112

Conread position: 4-401
Cow position: chrX:5919352-5919739 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 271
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 54

Conread position: 4-401
Cow position: chrX:17231594-17231986 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 29

Conread position: 4-401
Cow position: chrX:18485654-18486053 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 270
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 141

Conread position: 4-401
Cow position: chrX:22812920-22813315 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 111

Conread position: 4-401
Cow position: chrX:42381240-42380862 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 26

Conread position: 4-401
Cow position: chrX:46072961-46072578 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 268
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 79, 44

Conread position: 4-402
Cow position: chrX:22921172-22921571 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 268
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 141

Conread position: 4-402
Cow position: chrX:27446548-27446932 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 137

Conread position: 4-402
Cow position: chrX:41238506-41238111 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 273
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 91

Conread position: 4-407
Cow position: chrX:23563937-23563537 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 134

Conread position: 4-408
Cow position: chrX:47588560-47588969 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 261
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 145

Conread position: 4-410
Cow position: chrX:31489371-31489782 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 123

Conread position: 4-410
Cow position: chrX:47873482-47873075 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 269
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 131

Conread position: 4-411
Cow position: chrX:8917252-8917658 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 4-411
Cow position: chrX:14955909-14955505 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 271
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 119

Conread position: 4-413
Cow position: chrX:33000763-33001155 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 4-413
Cow position: chrX:34454520-34454922 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 271
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 95

Conread position: 4-414
Cow position: chrX:5118646-5118235 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 4-415
Cow position: chrX:21672411-21672830 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 61

Conread position: 4-418
Cow position: chrX:6278646-6278234 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 145

Conread position: 4-418
Cow position: chrX:22821907-22822319 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 287
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 60

Conread position: 4-418
Cow position: chrX:34411700-34412111 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 4-418
Cow position: chrX:38935141-38935544 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 81

Conread position: 4-424
Cow position: chrX:15545751-15546152 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 53

Conread position: 4-428
Cow position: chrX:42247324-42246900 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 31

Conread position: 4-429
Cow position: chrX:7351155-7351575 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 136

Conread position: 4-430
Cow position: chrX:15231798-15231374 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 278
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 42

Conread position: 4-430
Cow position: chrX:21663168-21663576 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 287
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 79

Conread position: 4-431
Cow position: chrX:20340032-20339617 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 48

Conread position: 5-189
Cow position: chrX:42994473-42994653 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 54

Conread position: 5-261
Cow position: chrX:45403973-45403713 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 145

Conread position: 5-278
Cow position: chrX:42171439-42171167 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 30, 48

Conread position: 5-302
Cow position: chrX:11614556-11614846 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 51

Conread position: 5-310
Cow position: chrX:41884557-41884252 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 53

Conread position: 5-322
Cow position: chrX:14599390-14599704 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 46

Conread position: 5-356
Cow position: chrX:47484411-47484057 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 30, 140

Conread position: 5-359
Cow position: chrX:41068583-41068928 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 79, 32

Conread position: 5-366
Cow position: chrX:34238576-34238938 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 82

Conread position: 5-367
Cow position: chrX:8730940-8731310 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 57

Conread position: 5-379
Cow position: chrX:14884101-14883729 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 30, 53

Conread position: 5-382
Cow position: chrX:9425881-9425531 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 51

Conread position: 5-388
Cow position: chrX:25035527-25035145 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 141

Conread position: 5-396
Cow position: chrX:44657104-44656719 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 259
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 30, 170

Conread position: 5-400
Cow position: chrX:7178765-7179132 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 5-402
Cow position: chrX:41790584-41790176 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 69

Conread position: 5-407
Cow position: chrX:48236673-48237072 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 274
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 139

Conread position: 5-412
Cow position: chrX:40481012-40480587 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 51

Conread position: 5-431
Cow position: chrX:27705441-27705869 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 125

Conread position: 6-190
Cow position: chrX:37750392-37750213 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 44

Conread position: 6-307
Cow position: chrX:22454234-22453942 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 80

Conread position: 6-368
Cow position: chrX:30922041-30922389 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 130

Conread position: 6-389
Cow position: chrX:46532648-46532252 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 274

Conread position: 6-390
Cow position: chrX:6407410-6407780 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 6-401
Cow position: chrX:41673966-41674349 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 275
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 33, 54

Conread position: 6-416
Cow position: chrX:7721846-7722239 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 53

Conread position: 6-419
Cow position: chrX:16541816-16541386 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 283
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 205

Conread position: 8-302
Cow position: chrX:42873252-42873537 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 116

Conread position: 8-422
Cow position: chrX:18204603-18204195 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 127

Conread position: 9-249
Cow position: chrX:27685108-27685349 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 22, 47

Conread position: 9-252
Cow position: chrX:26625806-26625568 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 22

Conread position: 9-256
Cow position: chrX:21566263-21566513 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 50

Conread position: 9-261
Cow position: chrX:45845960-45846213 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 50

Conread position: 9-313
Cow position: chrX:616401-616095 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 26, 49

Conread position: 9-363
Cow position: chrX:12309524-12309173 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 36

Conread position: 9-400
Cow position: chrX:4512096-4512494 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 260
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 33, 20

Conread position: 9-415
Cow position: chrX:5638301-5637919 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 268
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 227, 44

Conread position: 9-418
Cow position: chrX:22387382-22386979 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 290
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 24, 50

Conread position: 10-390
Cow position: chrX:4398991-4399357 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 74

Conread position: 12-371
Cow position: chrX:40685467-40685109 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 23, 46

Conread position: 13-182
Cow position: chrX:17908416-17908255 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 22

Conread position: 13-189
Cow position: chrX:6234588-6234410 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 46

Conread position: 13-252
Cow position: chrX:7646121-7646354 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 38

Conread position: 13-258
Cow position: chrX:15814952-15815192 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 46

Conread position: 13-298
Cow position: chrX:17541832-17542108 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 224, 43

Conread position: 13-306
Cow position: chrX:45113485-45113776 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 124

Conread position: 13-365
Cow position: chrX:31294693-31294355 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 5, 46

Conread position: 13-378
Cow position: chrX:36393482-36393114 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 169

Conread position: 13-400
Cow position: chrX:34565148-34565534 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 261
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 45

Conread position: 13-401
Cow position: chrX:44192584-44192190 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 77

Conread position: 13-402
Cow position: chrX:25816035-25815649 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 51

Conread position: 13-402
Cow position: chrX:41027022-41027413 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 13-428
Cow position: chrX:34554589-34555005 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 13-431
Cow position: chrX:7277780-7278183 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 276
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 49

Conread position: 14-414
Cow position: chrX:36311447-36311840 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 259
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 16

Conread position: 15-288
Cow position: chrX:48044646-48044378 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 5, 39

Conread position: 15-301
Cow position: chrX:5679696-5679421 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 69, 41

Conread position: 15-413
Cow position: chrX:33654975-33654580 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 6

Conread position: 16-198
Cow position: chrX:35681206-35681391 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 135

Conread position: 16-291
Cow position: chrX:35224164-35224437 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 132

Conread position: 16-313
Cow position: chrX:36067885-36068182 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 40

Conread position: 16-322
Cow position: chrX:3489023-3488719 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 181

Conread position: 16-367
Cow position: chrX:30840424-30840757 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 41

Conread position: 16-373
Cow position: chrX:44396887-44397233 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 42

Conread position: 16-379
Cow position: chrX:7695616-7695991 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 43

Conread position: 16-379
Cow position: chrX:34376821-34377167 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 16-390
Cow position: chrX:41870939-41871295 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 45

Conread position: 16-397
Cow position: chrX:34315398-34315773 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 267
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 71, 19

Conread position: 16-397
Cow position: chrX:45598732-45598357 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 250
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 33

Conread position: 16-400
Cow position: chrX:1176111-1175741 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 43

Conread position: 16-405
Cow position: chrX:21642610-21642228 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 23, 43

Conread position: 16-413
Cow position: chrX:30963006-30962609 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 16-415
Cow position: chrX:44961619-44962017 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 37

Conread position: 16-419
Cow position: chrX:46587687-46588093 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 139

Conread position: 16-424
Cow position: chrX:30133453-30133052 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 132

Conread position: 17-149
Cow position: chrX:35284488-35284624 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 42

Conread position: 17-277
Cow position: chrX:42470072-42469813 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 41

Conread position: 17-303
Cow position: chrX:19273854-19273552 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 42

Conread position: 17-313
Cow position: chrX:9365806-9365513 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 42

Conread position: 17-344
Cow position: chrX:27301739-27302070 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 24, 129

Conread position: 17-373
Cow position: chrX:1499534-1499876 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 89

Conread position: 17-388
Cow position: chrX:20168432-20168792 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 30

Conread position: 17-395
Cow position: chrX:31729312-31729682 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 18, 42

Conread position: 17-398
Cow position: chrX:41879063-41878688 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 17-399
Cow position: chrX:28013577-28013192 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 258
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 18, 46

Conread position: 17-401
Cow position: chrX:37955702-37956095 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 41

Conread position: 17-402
Cow position: chrX:33466480-33466873 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 42

Conread position: 17-407
Cow position: chrX:45976789-45977180 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 273

Conread position: 17-412
Cow position: chrX:42492646-42492259 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 69

Conread position: 17-420
Cow position: chrX:31436347-31436738 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 41

Conread position: 18-308
Cow position: chrX:6690383-6690102 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 117, 21

Conread position: 18-388
Cow position: chrX:43115021-43115386 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 17, 30

Conread position: 18-392
Cow position: chrX:45875261-45875638 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 122

Conread position: 18-401
Cow position: chrX:40826883-40826500 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 128

Conread position: 19-203
Cow position: chrX:28845706-28845887 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 20

Conread position: 19-277
Cow position: chrX:1514536-1514291 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 32

Conread position: 19-306
Cow position: chrX:38728608-38728890 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 32

Conread position: 19-329
Cow position: chrX:7710672-7710361 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 123

Conread position: 19-379
Cow position: chrX:24365954-24365594 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 228

Conread position: 19-426
Cow position: chrX:29120917-29121321 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 266
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 32

Conread position: 20-403
Cow position: chrX:46547002-46546622 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 247
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 41, 70

Conread position: 21-237
Cow position: chrX:16055084-16055295 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 90

Conread position: 21-364
Cow position: chrX:34222586-34222927 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 129

Conread position: 22-198
Cow position: chrX:19003174-19003346 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 36

Conread position: 22-390
Cow position: chrX:24331654-24332016 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 23-315
Cow position: chrX:32978199-32977921 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 27

Conread position: 23-398
Cow position: chrX:30338064-30337705 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 269, 32

Conread position: 24-313
Cow position: chrX:42235649-42235364 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 60, 32

Conread position: 24-397
Cow position: chrX:27946183-27945805 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 11, 128

Conread position: 25-189
Cow position: chrX:17497965-17498125 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 59, 30

Conread position: 25-304
Cow position: chrX:36515014-36514739 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 5

Conread position: 25-342
Cow position: chrX:4515564-4515879 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 40

Conread position: 25-396
Cow position: chrX:40175045-40175420 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 248
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 121

Conread position: 25-420
Cow position: chrX:18111267-18111649 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 55

Conread position: 26-203
Cow position: chrX:12018171-12018346 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 114

Conread position: 26-399
Cow position: chrX:40320283-40320655 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 96

Conread position: 28-412
Cow position: chrX:38654547-38654175 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 263
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 262, 27

Conread position: 29-134
Cow position: chrX:32747567-32747672 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 24

Conread position: 29-403
Cow position: chrX:9651141-9650778 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 26

Conread position: 32-307
Cow position: chrX:6265710-6265442 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 52, 15

Conread position: 32-373
Cow position: chrX:26881681-26881340 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 32-373
Cow position: chrX:42927932-42927608 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 56, 24

Conread position: 32-399
Cow position: chrX:29229896-29230249 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 6, 24

Conread position: 32-400
Cow position: chrX:4403201-4403567 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 30

Conread position: 32-403
Cow position: chrX:10829318-10829686 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 22

Conread position: 33-251
Cow position: chrX:44873673-44873459 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 113

Conread position: 33-313
Cow position: chrX:27119587-27119855 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 29

Conread position: 33-398
Cow position: chrX:41526633-41526288 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 34-307
Cow position: chrX:43567811-43568077 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 21

Conread position: 34-310
Cow position: chrX:29194123-29194392 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 21

Conread position: 34-369
Cow position: chrX:44744928-44744604 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 107

Conread position: 34-370
Cow position: chrX:4296939-4296605 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 113

Conread position: 34-402
Cow position: chrX:17949601-17949242 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 101

Conread position: 37-392
Cow position: chrX:6559553-6559213 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 54, 7

Conread position: 37-399
Cow position: chrX:47657276-47657643 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 240
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 94, 19

Conread position: 38-207
Cow position: chrX:35848454-35848623 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 18

Conread position: 38-261
Cow position: chrX:44836879-44837088 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 176, 17

Conread position: 38-390
Cow position: chrX:13923764-13924102 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 18

Conread position: 39-349
Cow position: chrX:169646-169343 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 255, 17

Conread position: 40-397
Cow position: chrX:30227-30580 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 175, 34

Conread position: 41-375
Cow position: chrX:29937983-29938316 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 105

Conread position: 41-395
Cow position: chrX:45448795-45449160 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 24

Conread position: 42-261
Cow position: chrX:47967495-47967719 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 42-312
Cow position: chrX:29549651-29549388 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 14

Conread position: 42-408
Cow position: chrX:22283730-22284096 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 45-390
Cow position: chrX:1466058-1466403 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 96

Conread position: 47-388
Cow position: chrX:34837153-34836836 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 52-313
Cow position: chrX:23562540-23562796 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 59

Conread position: 52-317
Cow position: chrX:38208637-38208378 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 22

Conread position: 52-376
Cow position: chrX:10516161-10516479 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 52-408
Cow position: chrX:46291043-46291399 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 71

Conread position: 52-414
Cow position: chrX:12095869-12095505 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 80

Conread position: 53-281
Cow position: chrX:19162434-19162209 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 87

Conread position: 53-313
Cow position: chrX:37129175-37129432 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 53-332
Cow position: chrX:33205058-33204787 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 71

Conread position: 55-429
Cow position: chrX:40336807-40337186 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 43, 19

Conread position: 56-300
Cow position: chrX:5900378-5900612 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 89

Conread position: 56-383
Cow position: chrX:27261097-27261422 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 221

Conread position: 56-396
Cow position: chrX:29050156-29050484 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 155

Conread position: 57-351
Cow position: chrX:40283036-40283323 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 81

Conread position: 57-390
Cow position: chrX:42855365-42855702 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 52

Conread position: 57-400
Cow position: chrX:16348658-16348301 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 152

Conread position: 58-388
Cow position: chrX:21327817-21328151 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 221

Conread position: 58-400
Cow position: chrX:48071072-48071413 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 82

Conread position: 59-389
Cow position: chrX:40680523-40680853 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 222

Conread position: 61-307
Cow position: chrX:11318053-11317811 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 73

Conread position: 61-425
Cow position: chrX:35590843-35590484 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 79

Conread position: 62-423
Cow position: chrX:8492996-8493337 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 316, 19

Conread position: 63-327
Cow position: chrX:23113194-23113459 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 34

Conread position: 64-408
Cow position: chrX:16575040-16575364 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 76

Conread position: 66-402
Cow position: chrX:47345253-47345581 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 21, 68

Conread position: 67-373
Cow position: chrX:39220000-39220310 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 17, 35

Conread position: 68-396
Cow position: chrX:36866092-36866419 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 88

Conread position: 70-312
Cow position: chrX:4746318-4746084 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 70

Conread position: 76-302
Cow position: chrX:22915107-22914892 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 39

Conread position: 77-399
Cow position: chrX:27459786-27460115 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 69

Conread position: 82-390
Cow position: chrX:7648465-7648174 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 204, 49

Conread position: 83-388
Cow position: chrX:13146919-13147221 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 69, 5

Conread position: 83-395
Cow position: chrX:19660525-19660210 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 206
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 6

Conread position: 85-356
Cow position: chrX:19965463-19965190 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 175
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 179

Conread position: 85-367
Cow position: chrX:44703133-44702849 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 50, 61

Conread position: 85-379
Cow position: chrX:296334-296620 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 64

Conread position: 85-379
Cow position: chrX:4109129-4109413 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 48, 59

Conread position: 85-379
Cow position: chrX:4153096-4152816 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 191

Conread position: 85-379
Cow position: chrX:22115377-22115086 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 224, 54

Conread position: 85-379
Cow position: chrX:48003786-48004074 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 85-390
Cow position: chrX:38321448-38321143 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 71, 57

Conread position: 85-393
Cow position: chrX:25036926-25037234 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 215, 59

Conread position: 85-398
Cow position: chrX:1088197-1087902 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 22

Conread position: 85-403
Cow position: chrX:23561800-23562125 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 49

Conread position: 85-410
Cow position: chrX:20957187-20957494 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 85-420
Cow position: chrX:13121869-13122216 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 85-427
Cow position: chrX:2675018-2674685 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 86-288
Cow position: chrX:46429881-46429681 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 17

Conread position: 86-399
Cow position: chrX:27511367-27511679 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 59

Conread position: 88-350
Cow position: chrX:14275804-14275549 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 60

Conread position: 88-367
Cow position: chrX:1360028-1360298 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 115, 45

Conread position: 88-398
Cow position: chrX:5063195-5063484 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 289, 18

Conread position: 89-311
Cow position: chrX:31627038-31626820 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 60

Conread position: 89-383
Cow position: chrX:40108573-40108280 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 119, 35

Conread position: 89-391
Cow position: chrX:19469563-19469274 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 283, 41

Conread position: 91-386
Cow position: chrX:44339379-44339086 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 55

Conread position: 91-398
Cow position: chrX:6541791-6541488 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 105, 54

Conread position: 91-408
Cow position: chrX:5134420-5134732 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 42

Conread position: 92-401
Cow position: chrX:35985764-35986069 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 63

Conread position: 93-401
Cow position: chrX:11825693-11825393 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 94-383
Cow position: chrX:18964876-18964602 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 200, 15

Conread position: 94-397
Cow position: chrX:43321119-43320808 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 170

Conread position: 97-353
Cow position: chrX:44660635-44660386 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 97-369
Cow position: chrX:47358260-47358532 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 5

Conread position: 97-379
Cow position: chrX:44202094-44201817 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 182
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 160, 5

Conread position: 97-391
Cow position: chrX:22393035-22392748 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 161, 42

Conread position: 97-401
Cow position: chrX:48198694-48198399 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 161, 5

Conread position: 97-404
Cow position: chrX:45488871-45489173 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 195
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 160, 5

Conread position: 97-407
Cow position: chrX:47013450-47013142 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 160, 5

Conread position: 97-408
Cow position: chrX:48473860-48474168 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 202, 5

Conread position: 97-413
Cow position: chrX:46793793-46793488 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 99-398
Cow position: chrX:16409559-16409865 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 169, 38

Conread position: 99-419
Cow position: chrX:36367989-36367670 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 38, 48

Conread position: 99-424
Cow position: chrX:43008550-43008881 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 179

Conread position: 100-386
Cow position: chrX:36392234-36391952 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 39

Conread position: 100-428
Cow position: chrX:24457599-24457275 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 208
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 33

Conread position: 101-370
Cow position: chrX:4645957-4645695 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 102-401
Cow position: chrX:34540635-34540934 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 207, 42

Conread position: 106-397
Cow position: chrX:43150380-43150678 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 31, 172

Conread position: 108-400
Cow position: chrX:35431282-35430988 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 34

Conread position: 109-389
Cow position: chrX:11326137-11325867 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 51, 38

Conread position: 109-390
Cow position: chrX:19394515-19394795 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 166, 34

Conread position: 109-392
Cow position: chrX:48558710-48558988 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 24

Conread position: 109-398
Cow position: chrX:42893880-42894172 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 167

Conread position: 109-399
Cow position: chrX:6599821-6599528 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 191, 43

Conread position: 109-405
Cow position: chrX:24749050-24749335 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 173, 35

Conread position: 110-398
Cow position: chrX:28940210-28940491 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 12

Conread position: 111-401
Cow position: chrX:40574982-40574693 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 188
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 103

Conread position: 111-412
Cow position: chrX:17956660-17956948 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 33

Conread position: 112-368
Cow position: chrX:44090888-44091140 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 166
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 145, 27

Conread position: 112-375
Cow position: chrX:44796348-44796609 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 133, 27

Conread position: 112-387
Cow position: chrX:45254617-45254346 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 145, 27

Conread position: 112-401
Cow position: chrX:4289405-4289686 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 92, 169

Conread position: 112-410
Cow position: chrX:44591096-44590802 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 145, 27

Conread position: 112-410
Cow position: chrX:48194925-48194632 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 189
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 147, 27

Conread position: 112-430
Cow position: chrX:44736890-44736583 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 204
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 145, 27

Conread position: 114-406
Cow position: chrX:41941594-41941878 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 119-313
Cow position: chrX:20743575-20743768 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 175, 27

Conread position: 119-371
Cow position: chrX:32318276-32318520 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 89, 28

Conread position: 129-378
Cow position: chrX:32910085-32910324 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 16

Conread position: 130-373
Cow position: chrX:27075070-27074829 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 177, 149

Conread position: 132-365
Cow position: chrX:32574300-32574530 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 0

Conread position: 134-410
Cow position: chrX:27145588-27145856 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 146

Conread position: 135-413
Cow position: chrX:1552955-1553233 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 260, 144

Conread position: 136-356
Cow position: chrX:35620689-35620910 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 131

Conread position: 137-408
Cow position: chrX:36109626-36109358 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 165, 9

Conread position: 138-409
Cow position: chrX:26205458-26205196 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 242, 9

Conread position: 139-397
Cow position: chrX:16984631-16984882 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 242, 122

Conread position: 143-419
Cow position: chrX:39180239-39179972 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 109, 0

Conread position: 146-397
Cow position: chrX:40532046-40531780 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 146-399
Cow position: chrX:27668961-27668712 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 231, 129

Conread position: 146-401
Cow position: chrX:42479830-42480075 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 202, 133

Conread position: 147-376
Cow position: chrX:29478722-29478947 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 147-379
Cow position: chrX:38587845-38587617 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 147-388
Cow position: chrX:23335974-23335738 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 147-393
Cow position: chrX:39290357-39290599 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 198, 131

Conread position: 147-398
Cow position: chrX:35275984-35276233 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 147-399
Cow position: chrX:26979791-26979543 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 0

Conread position: 148-368
Cow position: chrX:42432516-42432297 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 86

Conread position: 148-390
Cow position: chrX:34420733-34420975 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 161, 122

Conread position: 148-394
Cow position: chrX:37856351-37856605 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 121

Conread position: 148-430
Cow position: chrX:26843270-26842983 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 156, 115

Conread position: 149-416
Cow position: chrX:29501881-29501619 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 30

Conread position: 151-392
Cow position: chrX:24336075-24335836 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 151-431
Cow position: chrX:17524382-17524106 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 0

Conread position: 152-377
Cow position: chrX:2935960-2936179 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 152-395
Cow position: chrX:17292958-17293202 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 226, 128

Conread position: 152-398
Cow position: chrX:16836283-16836046 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 233, 63

Conread position: 152-401
Cow position: chrX:12972684-12972928 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 43

Conread position: 152-401
Cow position: chrX:25049279-25049032 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 152-404
Cow position: chrX:44040184-44040429 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 152-408
Cow position: chrX:38967891-38968150 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 29, 76

Conread position: 153-399
Cow position: chrX:32943072-32942833 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 154-368
Cow position: chrX:42836186-42836398 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 0

Conread position: 154-373
Cow position: chrX:1122538-1122325 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 154-387
Cow position: chrX:24170724-24170489 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 141, 91

Conread position: 154-430
Cow position: chrX:42450009-42449726 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 221, 126

Conread position: 159-373
Cow position: chrX:38301819-38302036 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 99, 94

Conread position: 160-395
Cow position: chrX:29467767-29467537 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 218, 120

Conread position: 161-381
Cow position: chrX:35392282-35392074 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 217, 44

Conread position: 161-410
Cow position: chrX:4328171-4327922 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 196, 107

Conread position: 162-322
Cow position: chrX:36313993-36313835 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 162-376
Cow position: chrX:3494809-3494596 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 162-403
Cow position: chrX:45139919-45139680 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 91

Conread position: 163-379
Cow position: chrX:3806696-3806907 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 210, 107

Conread position: 163-394
Cow position: chrX:19018817-19018585 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 149, 117

Conread position: 164-400
Cow position: chrX:35658814-35659044 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 223, 51

Conread position: 164-415
Cow position: chrX:24104854-24105107 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 165
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 190, 115

Conread position: 165-388
Cow position: chrX:31479987-31480203 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 165-391
Cow position: chrX:20583682-20583900 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 114, 0

Conread position: 166-376
Cow position: chrX:19761771-19761974 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 166-407
Cow position: chrX:20345470-20345706 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 168-401
Cow position: chrX:19717540-19717760 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 169-394
Cow position: chrX:24425982-24425758 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 169-422
Cow position: chrX:28067870-28068122 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 110, 0

Conread position: 171-397
Cow position: chrX:34398762-34398537 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 109, 0

Conread position: 174-408
Cow position: chrX:31250870-31250637 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 230, 105

Conread position: 175-394
Cow position: chrX:41453328-41453545 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 207, 99

Conread position: 175-395
Cow position: chrX:16763901-16763686 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 30, 92

Conread position: 177-379
Cow position: chrX:23359083-23358889 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 177-400
Cow position: chrX:32866903-32867120 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 203, 102

Conread position: 177-422
Cow position: chrX:2314591-2314347 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 201, 92

Conread position: 178-401
Cow position: chrX:46909844-46910056 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 179-382
Cow position: chrX:37749953-37749763 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 39

Conread position: 179-398
Cow position: chrX:4091954-4092170 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 193, 91

Conread position: 180-399
Cow position: chrX:18439027-18439244 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 185-401
Cow position: chrX:3605916-3606130 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 192-409
Cow position: chrX:10415210-10414994 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 194-387
Cow position: chrX:29451506-29451309 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 194-390
Cow position: chrX:5097756-5097555 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 90

Conread position: 194-391
Cow position: chrX:32877330-32877139 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 194-399
Cow position: chrX:11674155-11674362 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 23

Conread position: 194-400
Cow position: chrX:35409797-35410000 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 194-404
Cow position: chrX:46068714-46068511 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 194-411
Cow position: chrX:8642091-8642305 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 194-431
Cow position: chrX:47601279-47601042 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 192, 75

Conread position: 195-406
Cow position: chrX:6389127-6389334 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 196-373
Cow position: chrX:8326951-8327127 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 197-378
Cow position: chrX:41166777-41166602 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 197-428
Cow position: chrX:43028281-43028500 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 26

Conread position: 207-379
Cow position: chrX:6480538-6480367 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 10

Conread position: 210-398
Cow position: chrX:16412220-16412033 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 53

Conread position: 210-400
Cow position: chrX:597413-597228 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 179, 27

Conread position: 210-419
Cow position: chrX:19000187-19000394 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 210-428
Cow position: chrX:42875273-42875484 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 211-396
Cow position: chrX:34991426-34991606 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 211-431
Cow position: chrX:17525805-17525598 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 212-346
Cow position: chrX:24633460-24633328 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 212-379
Cow position: chrX:4602875-4602710 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 212-379
Cow position: chrX:6634407-6634573 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 212-379
Cow position: chrX:25930700-25930868 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 129

Conread position: 212-379
Cow position: chrX:27416156-27416323 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 15

Conread position: 212-383
Cow position: chrX:36922079-36921911 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 212-398
Cow position: chrX:14951290-14951106 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 212-404
Cow position: chrX:16770127-16770318 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 212-416
Cow position: chrX:41215385-41215585 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 213-387
Cow position: chrX:11670749-11670923 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 67

Conread position: 215-417
Cow position: chrX:1571524-1571334 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 65

Conread position: 217-398
Cow position: chrX:37867321-37867500 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 217-400
Cow position: chrX:37867500-37867682 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 218-367
Cow position: chrX:10237844-10237697 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 218-373
Cow position: chrX:11653839-11653989 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 218-376
Cow position: chrX:46533236-46533079 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 218-377
Cow position: chrX:48574288-48574128 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 78, 61

Conread position: 218-379
Cow position: chrX:40648964-40649130 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 61

Conread position: 218-379
Cow position: chrX:42760321-42760481 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 218-379
Cow position: chrX:48822273-48822114 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 218-387
Cow position: chrX:5915257-5915429 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 43

Conread position: 218-388
Cow position: chrX:37752037-37751874 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 218-390
Cow position: chrX:11589298-11589128 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 218-390
Cow position: chrX:28106916-28107085 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 218-390
Cow position: chrX:45044521-45044693 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 74, 61

Conread position: 218-391
Cow position: chrX:9451414-9451581 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 54

Conread position: 218-393
Cow position: chrX:43059183-43059014 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 62

Conread position: 218-395
Cow position: chrX:1101626-1101798 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 160, 54

Conread position: 218-395
Cow position: chrX:14925341-14925519 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 160, 51

Conread position: 218-399
Cow position: chrX:41010967-41011138 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 218-400
Cow position: chrX:1938083-1938262 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 218-400
Cow position: chrX:4559802-4559983 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 218-400
Cow position: chrX:8759695-8759871 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 218-400
Cow position: chrX:27270444-27270618 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 52

Conread position: 218-401
Cow position: chrX:17498391-17498575 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 171, 54

Conread position: 218-402
Cow position: chrX:41435480-41435291 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 61

Conread position: 218-408
Cow position: chrX:35681636-35681824 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 218-410
Cow position: chrX:44995567-44995760 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 62

Conread position: 218-411
Cow position: chrX:35285242-35285435 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 181, 61

Conread position: 218-421
Cow position: chrX:10880720-10880516 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 170, 47

Conread position: 218-424
Cow position: chrX:44225662-44225460 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 77

Conread position: 218-431
Cow position: chrX:4169962-4169752 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 50

Conread position: 219-367
Cow position: chrX:11813143-11813290 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 219-373
Cow position: chrX:3494975-3494828 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 39, 18

Conread position: 219-376
Cow position: chrX:13347343-13347494 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 219-382
Cow position: chrX:11781521-11781675 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 62

Conread position: 219-382
Cow position: chrX:16801193-16801036 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 219-382
Cow position: chrX:30789461-30789298 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 73, 61

Conread position: 219-383
Cow position: chrX:33678403-33678238 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 219-390
Cow position: chrX:10278940-10279114 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 69, 44

Conread position: 219-395
Cow position: chrX:51831-51660 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 219-395
Cow position: chrX:32215298-32215474 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 170, 61

Conread position: 219-408
Cow position: chrX:47100527-47100330 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 60

Conread position: 219-414
Cow position: chrX:34270631-34270816 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 219-414
Cow position: chrX:44941791-44941982 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 44

Conread position: 220-378
Cow position: chrX:23497620-23497470 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 220-379
Cow position: chrX:42086898-42087054 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 220-380
Cow position: chrX:41858811-41858655 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 220-382
Cow position: chrX:41454883-41454722 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 220-388
Cow position: chrX:39642551-39642391 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 220-393
Cow position: chrX:31983514-31983332 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 59

Conread position: 220-402
Cow position: chrX:11529414-11529589 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 220-404
Cow position: chrX:41199295-41199474 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 25, 62

Conread position: 220-406
Cow position: chrX:40556388-40556211 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 220-430
Cow position: chrX:47855052-47855259 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 160, 21

Conread position: 221-393
Cow position: chrX:45657868-45657693 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 82, 58

Conread position: 221-400
Cow position: chrX:34194009-34193832 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 222-379
Cow position: chrX:31279851-31279699 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 222-426
Cow position: chrX:42216556-42216356 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 152, 26

Conread position: 224-373
Cow position: chrX:4486949-4486802 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 224-401
Cow position: chrX:14135753-14135928 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 165, 55

Conread position: 224-405
Cow position: chrX:42506874-42506695 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 68, 55

Conread position: 225-382
Cow position: chrX:34108282-34108127 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 225-397
Cow position: chrX:30672314-30672139 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 75, 54

Conread position: 225-402
Cow position: chrX:30958806-30958981 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 156, 50

Conread position: 225-405
Cow position: chrX:4750256-4750087 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 225-424
Cow position: chrX:11517904-11517704 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 55

Conread position: 226-377
Cow position: chrX:22552902-22552753 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 226-400
Cow position: chrX:26720605-26720441 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 227-367
Cow position: chrX:31986494-31986356 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 227-373
Cow position: chrX:28167057-28167201 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 227-378
Cow position: chrX:11602407-11602260 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 26

Conread position: 227-392
Cow position: chrX:37717800-37717966 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 153, 10

Conread position: 227-394
Cow position: chrX:22864185-22864017 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 159, 0

Conread position: 228-379
Cow position: chrX:27415501-27415359 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 148, 53

Conread position: 229-413
Cow position: chrX:35509599-35509420 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 229-428
Cow position: chrX:17929081-17929272 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 230-394
Cow position: chrX:42516049-42515887 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 234-390
Cow position: chrX:19356548-19356704 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 144, 45

Conread position: 234-431
Cow position: chrX:19511032-19510829 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 31

Conread position: 235-395
Cow position: chrX:876761-876602 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 145, 34

Conread position: 237-391
Cow position: chrX:1996364-1996211 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 238-383
Cow position: chrX:39887125-39886980 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 57, 41

Conread position: 242-373
Cow position: chrX:10479842-10479972 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 245-389
Cow position: chrX:42159037-42159180 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 249-399
Cow position: chrX:41194005-41194153 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 108, 29

Conread position: 255-421
Cow position: chrX:6855965-6856127 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 256-417
Cow position: chrX:42220595-42220433 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 23

Conread position: 265-388
Cow position: chrX:19162015-19161892 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 15

Conread position: 270-422
Cow position: chrX:15534092-15533942 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 114

Conread position: 272-401
Cow position: chrX:18196120-18196249 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 121

Conread position: 272-401
Cow position: chrX:38080269-38080399 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 272-405
Cow position: chrX:23185216-23185082 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 275-412
Cow position: chrX:783569-783705 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 118

Conread position: 276-404
Cow position: chrX:32590280-32590151 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 284-427
Cow position: chrX:755076-755219 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 286-398
Cow position: chrX:3130778-3130893 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 0

Show alignments to all cow chromosomes.