Cow genome map

Conread name: rspc022_i7.y1

Conread position: 3-207
Cow position: chr26:9491938-9491742 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 31

Conread position: 4-128
Cow position: chr26:24240691-24240565 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 4-134
Cow position: chr26:8341466-8341338 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 30

Conread position: 4-159
Cow position: chr26:31572257-31572110 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 4-160
Cow position: chr26:12964683-12964839 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 40, 21

Conread position: 4-163
Cow position: chr26:20769862-20769709 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 4-175
Cow position: chr26:22892434-22892602 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 133, 66

Conread position: 4-197
Cow position: chr26:22354424-22354237 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 115, 37

Conread position: 4-203
Cow position: chr26:613664-613854 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 21

Conread position: 4-204
Cow position: chr26:11134675-11134880 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 129

Conread position: 4-204
Cow position: chr26:28760080-28760271 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 21

Conread position: 4-205
Cow position: chr26:19774288-19774488 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 21

Conread position: 4-206
Cow position: chr26:9692290-9692497 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 142

Conread position: 4-206
Cow position: chr26:25737482-25737286 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 11

Conread position: 4-206
Cow position: chr26:33096547-33096751 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 14

Conread position: 4-207
Cow position: chr26:1587602-1587414 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 20

Conread position: 4-207
Cow position: chr26:7525462-7525654 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 60

Conread position: 4-207
Cow position: chr26:13021134-13021335 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 4-207
Cow position: chr26:13802124-13801925 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 0

Conread position: 4-207
Cow position: chr26:16921949-16921758 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 16

Conread position: 4-207
Cow position: chr26:20846634-20846437 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 4-207
Cow position: chr26:21243113-21242917 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 108, 32

Conread position: 4-207
Cow position: chr26:23001026-23001231 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 33

Conread position: 4-207
Cow position: chr26:23925974-23926164 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 4-207
Cow position: chr26:26466717-26466906 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 4-207
Cow position: chr26:27163461-27163261 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 28

Conread position: 4-207
Cow position: chr26:27491487-27491691 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-207
Cow position: chr26:32013644-32013445 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 157

Conread position: 4-207
Cow position: chr26:34314702-34314490 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 22

Conread position: 4-208
Cow position: chr26:5307154-5306945 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 41, 27

Conread position: 4-208
Cow position: chr26:8700036-8700237 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 23

Conread position: 4-208
Cow position: chr26:34738136-34738335 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 82

Conread position: 4-208
Cow position: chr26:35704399-35704199 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 23

Conread position: 5-197
Cow position: chr26:34060343-34060157 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 33

Conread position: 5-207
Cow position: chr26:15200504-15200703 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 107, 38

Conread position: 5-207
Cow position: chr26:19110929-19110716 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 163

Conread position: 5-207
Cow position: chr26:23097170-23097364 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 22

Conread position: 5-207
Cow position: chr26:29353491-29353697 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 5-207
Cow position: chr26:31779492-31779288 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 20

Conread position: 5-209
Cow position: chr26:7155981-7155785 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 179, 22

Conread position: 6-160
Cow position: chr26:647714-647859 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 80

Conread position: 7-196
Cow position: chr26:6475419-6475603 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 27

Conread position: 7-204
Cow position: chr26:5246470-5246671 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 31

Conread position: 8-207
Cow position: chr26:2029536-2029733 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 163, 18

Conread position: 9-207
Cow position: chr26:9604568-9604375 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 22

Conread position: 9-271
Cow position: chr26:21351697-21351445 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 18, 30

Conread position: 10-207
Cow position: chr26:26294192-26294374 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 12-207
Cow position: chr26:7103021-7103222 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 87

Conread position: 13-207
Cow position: chr26:8811135-8810946 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 141

Conread position: 13-207
Cow position: chr26:14174308-14174110 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 13-207
Cow position: chr26:30128019-30128205 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 14-206
Cow position: chr26:16549989-16549795 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 14-207
Cow position: chr26:19459686-19459486 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 5

Conread position: 15-204
Cow position: chr26:17148708-17148517 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 15-207
Cow position: chr26:30034400-30034591 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 135

Conread position: 17-207
Cow position: chr26:31605406-31605221 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 17, 10

Conread position: 18-203
Cow position: chr26:3071970-3072145 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 18-207
Cow position: chr26:6188292-6188110 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 18-207
Cow position: chr26:33567045-33567229 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 11, 115

Conread position: 19-207
Cow position: chr26:6714294-6714469 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 112

Conread position: 19-208
Cow position: chr26:22249481-22249669 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 88, 23

Conread position: 20-207
Cow position: chr26:20129675-20129861 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 86

Conread position: 21-200
Cow position: chr26:27761648-27761828 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 143

Conread position: 23-155
Cow position: chr26:10767914-10768049 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 24-195
Cow position: chr26:25299593-25299422 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 85, 10

Conread position: 24-207
Cow position: chr26:32776512-32776691 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 98

Conread position: 26-206
Cow position: chr26:18692413-18692248 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 32-207
Cow position: chr26:1329530-1329359 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 13, 85

Conread position: 32-207
Cow position: chr26:13270687-13270864 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 33-205
Cow position: chr26:9867132-9867299 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 123

Conread position: 33-207
Cow position: chr26:9104295-9104467 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 24

Conread position: 34-160
Cow position: chr26:33736570-33736693 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 34-204
Cow position: chr26:33112399-33112569 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 34-205
Cow position: chr26:34847726-34847558 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 128

Conread position: 35-197
Cow position: chr26:16179547-16179383 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 35-203
Cow position: chr26:32571068-32570905 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 35-207
Cow position: chr26:19769102-19769271 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 36-197
Cow position: chr26:23315752-23315590 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 138
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 8, 0

Conread position: 36-206
Cow position: chr26:6252834-6252662 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 37-197
Cow position: chr26:10764195-10764043 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 37-200
Cow position: chr26:34108739-34108584 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 160, 21

Conread position: 37-206
Cow position: chr26:798317-798483 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 59

Conread position: 37-207
Cow position: chr26:17057661-17057496 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 37-207
Cow position: chr26:32897891-32898057 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 141
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 124, 0

Conread position: 38-207
Cow position: chr26:14958034-14958205 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 38-207
Cow position: chr26:20013457-20013293 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 38-207
Cow position: chr26:31701801-31701629 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 38-207
Cow position: chr26:32026387-32026556 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 82, 150

Conread position: 38-207
Cow position: chr26:33857215-33857383 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 32

Conread position: 39-207
Cow position: chr26:30806527-30806698 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 40-160
Cow position: chr26:19446102-19445984 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 43-200
Cow position: chr26:32672462-32672619 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 64, 118

Conread position: 43-207
Cow position: chr26:35449034-35448877 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 43-208
Cow position: chr26:8186625-8186463 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 12

Conread position: 47-163
Cow position: chr26:7961602-7961486 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 47-207
Cow position: chr26:6794117-6793954 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 7

Conread position: 47-207
Cow position: chr26:8745862-8746018 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 65, 38

Conread position: 47-209
Cow position: chr26:25074049-25073885 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 117

Conread position: 49-207
Cow position: chr26:19447456-19447613 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 99

Conread position: 51-207
Cow position: chr26:6793909-6793755 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 96

Conread position: 54-200
Cow position: chr26:32865926-32866067 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.