Cow genome map
| Conread name: | rspc022_i7.y1 |
| Conread position: | 1-188 |
| Cow position: | chr27:20789420-20789239 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 1-207 |
| Cow position: | chr27:15409077-15408884 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 3-202 |
| Cow position: | chr27:28190253-28190063 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 3-207 |
| Cow position: | chr27:9169685-9169485 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 110, 40 |
| Conread position: | 3-207 |
| Cow position: | chr27:19717881-19718083 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 3-207 |
| Cow position: | chr27:25277101-25277296 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 109, 34 |
| Conread position: | 4-135 |
| Cow position: | chr27:23510949-23511081 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 4-154 |
| Cow position: | chr27:27694810-27694662 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 4-158 |
| Cow position: | chr27:16625859-16626010 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-160 |
| Cow position: | chr27:30389335-30389180 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 4-168 |
| Cow position: | chr27:20570082-20570246 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 21 |
| Conread position: | 4-170 |
| Cow position: | chr27:26141732-26141898 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 21 |
| Conread position: | 4-172 |
| Cow position: | chr27:4011641-4011807 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 4-172 |
| Cow position: | chr27:16478380-16478213 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 4-172 |
| Cow position: | chr27:30359369-30359532 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 4-185 |
| Cow position: | chr27:16103769-16103941 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 4-189 |
| Cow position: | chr27:17331458-17331644 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 4-190 |
| Cow position: | chr27:435196-435378 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 4-190 |
| Cow position: | chr27:26643646-26643821 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 4-195 |
| Cow position: | chr27:3306735-3306921 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 4-197 |
| Cow position: | chr27:22171259-22171448 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 30, 170 |
| Conread position: | 4-197 |
| Cow position: | chr27:23890900-23891087 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 4-197 |
| Cow position: | chr27:25379952-25380140 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 4-204 |
| Cow position: | chr27:31373021-31372823 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 135 |
| Conread position: | 4-205 |
| Cow position: | chr27:22220516-22220711 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 4-205 |
| Cow position: | chr27:22426870-22426671 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 4-206 |
| Cow position: | chr27:2683183-2682985 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 4-206 |
| Cow position: | chr27:21351060-21350857 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 4-206 |
| Cow position: | chr27:24331682-24331884 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 4-206 |
| Cow position: | chr27:27844036-27843834 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 4-207 |
| Cow position: | chr27:815326-815524 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 4-207 |
| Cow position: | chr27:2592505-2592701 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 143 |
| Conread position: | 4-207 |
| Cow position: | chr27:4672978-4673180 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 41, 151 |
| Conread position: | 4-207 |
| Cow position: | chr27:10979825-10980023 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 22 |
| Conread position: | 4-207 |
| Cow position: | chr27:15643135-15643335 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 4-207 |
| Cow position: | chr27:17397492-17397287 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 4-207 |
| Cow position: | chr27:20283606-20283791 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 4-207 |
| Cow position: | chr27:20641373-20641187 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 4-207 |
| Cow position: | chr27:22035415-22035214 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 4-207 |
| Cow position: | chr27:25790766-25790963 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 4-207 |
| Cow position: | chr27:26150982-26151179 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 4-207 |
| Cow position: | chr27:26238987-26239184 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 4-207 |
| Cow position: | chr27:26398296-26398099 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 4-207 |
| Cow position: | chr27:26433845-26433652 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-207 |
| Cow position: | chr27:27020144-27019941 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 4-207 |
| Cow position: | chr27:27038879-27038684 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 4-207 |
| Cow position: | chr27:27040564-27040767 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 159 |
| Conread position: | 4-207 |
| Cow position: | chr27:27449473-27449275 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 4-207 |
| Cow position: | chr27:30407075-30406872 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 151, 42 |
| Conread position: | 4-207 |
| Cow position: | chr27:30868778-30868579 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 4-207 |
| Cow position: | chr27:30988759-30988957 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 4-208 |
| Cow position: | chr27:732534-732732 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 4-208 |
| Cow position: | chr27:19387980-19388179 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 176, 22 |
| Conread position: | 4-208 |
| Cow position: | chr27:30764993-30765192 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 148 |
| Conread position: | 4-210 |
| Cow position: | chr27:16780828-16781027 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 5-181 |
| Cow position: | chr27:715463-715640 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 5-197 |
| Cow position: | chr27:26413291-26413106 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-200 |
| Cow position: | chr27:15319413-15319604 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 107, 14 |
| Conread position: | 5-203 |
| Cow position: | chr27:29283445-29283253 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 5-206 |
| Cow position: | chr27:28518255-28518444 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 5-207 |
| Cow position: | chr27:706913-707107 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 5-207 |
| Cow position: | chr27:28921931-28921737 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 5-207 |
| Cow position: | chr27:30354381-30354184 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-208 |
| Cow position: | chr27:6523001-6523206 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 37 |
| Conread position: | 5-208 |
| Cow position: | chr27:19685750-19685554 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 6-201 |
| Cow position: | chr27:1768661-1768480 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 6-205 |
| Cow position: | chr27:26959651-26959463 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 6-206 |
| Cow position: | chr27:14902689-14902490 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 106, 32 |
| Conread position: | 6-207 |
| Cow position: | chr27:24999776-24999575 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 104, 32 |
| Conread position: | 6-207 |
| Cow position: | chr27:27632644-27632450 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 7-206 |
| Cow position: | chr27:28164438-28164253 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-207 |
| Cow position: | chr27:19546549-19546343 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 145 |
| Conread position: | 8-148 |
| Cow position: | chr27:22386834-22386974 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 8-188 |
| Cow position: | chr27:30856418-30856250 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 8-207 |
| Cow position: | chr27:7212747-7212553 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 8-207 |
| Cow position: | chr27:8048780-8048577 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 8-207 |
| Cow position: | chr27:23483190-23483382 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 100 |
| Conread position: | 8-207 |
| Cow position: | chr27:26224306-26224109 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 8-207 |
| Cow position: | chr27:26426173-26426368 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 9-206 |
| Cow position: | chr27:10992320-10992512 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 10-204 |
| Cow position: | chr27:12246626-12246815 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 10-208 |
| Cow position: | chr27:22330705-22330509 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 12-207 |
| Cow position: | chr27:9090836-9090642 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 34, 119 |
| Conread position: | 12-207 |
| Cow position: | chr27:13251979-13252169 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 108, 15 |
| Conread position: | 13-200 |
| Cow position: | chr27:30890256-30890443 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-206 |
| Cow position: | chr27:27528384-27528203 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 13-207 |
| Cow position: | chr27:20553695-20553876 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 13-207 |
| Cow position: | chr27:30792967-30792777 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 14-206 |
| Cow position: | chr27:27641032-27640833 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 14-207 |
| Cow position: | chr27:1183906-1183717 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 95, 24 |
| Conread position: | 15-205 |
| Cow position: | chr27:18031095-18030899 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 15-207 |
| Cow position: | chr27:27245382-27245191 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 15-207 |
| Cow position: | chr27:28061788-28061605 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 16-207 |
| Cow position: | chr27:16871942-16871756 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 16-207 |
| Cow position: | chr27:21669148-21668965 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 16-207 |
| Cow position: | chr27:27055547-27055737 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 18-156 |
| Cow position: | chr27:26226315-26226178 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 7 |
| Conread position: | 18-173 |
| Cow position: | chr27:8168454-8168300 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 18-203 |
| Cow position: | chr27:19660908-19661097 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 174 |
| Conread position: | 18-204 |
| Cow position: | chr27:27550765-27550591 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 18-207 |
| Cow position: | chr27:20591955-20592143 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 18-207 |
| Cow position: | chr27:22268477-22268664 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 18-207 |
| Cow position: | chr27:28931820-28931628 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 19-172 |
| Cow position: | chr27:27003298-27003148 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 20-204 |
| Cow position: | chr27:6037098-6037279 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 20-206 |
| Cow position: | chr27:8430463-8430280 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 6, 71 |
| Conread position: | 20-206 |
| Cow position: | chr27:18739361-18739546 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 20-207 |
| Cow position: | chr27:6541606-6541784 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 20-207 |
| Cow position: | chr27:19647965-19647782 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 21-206 |
| Cow position: | chr27:15859112-15858932 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 22-197 |
| Cow position: | chr27:1498293-1498463 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 24, 149 |
| Conread position: | 22-198 |
| Cow position: | chr27:18543970-18544148 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 22-205 |
| Cow position: | chr27:17472786-17472970 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 22-206 |
| Cow position: | chr27:23455180-23454983 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 22-206 |
| Cow position: | chr27:24357234-24357424 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 23-207 |
| Cow position: | chr27:8942705-8942524 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 23-207 |
| Cow position: | chr27:19589453-19589635 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 23-211 |
| Cow position: | chr27:20118380-20118564 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 26-172 |
| Cow position: | chr27:22569756-22569898 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 26-207 |
| Cow position: | chr27:16705233-16705406 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 26-207 |
| Cow position: | chr27:21569863-21569684 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 11, 108 |
| Conread position: | 27-201 |
| Cow position: | chr27:27554701-27554531 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 113 |
| Conread position: | 27-207 |
| Cow position: | chr27:26441079-26440897 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 27-208 |
| Cow position: | chr27:26509179-26508996 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 27-210 |
| Cow position: | chr27:13875711-13875897 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 28-204 |
| Cow position: | chr27:23882394-23882217 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 29-206 |
| Cow position: | chr27:1903045-1903221 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 30-191 |
| Cow position: | chr27:29399800-29399958 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 31-204 |
| Cow position: | chr27:26428146-26427972 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 31-206 |
| Cow position: | chr27:20354570-20354738 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 115 |
| Conread position: | 31-206 |
| Cow position: | chr27:22547420-22547246 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 33-170 |
| Cow position: | chr27:26857207-26857068 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 33-190 |
| Cow position: | chr27:16589725-16589570 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 33-207 |
| Cow position: | chr27:13639006-13638833 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 34-204 |
| Cow position: | chr27:19577664-19577831 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 34-204 |
| Cow position: | chr27:31231097-31230937 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 34-207 |
| Cow position: | chr27:14670398-14670221 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 34-207 |
| Cow position: | chr27:24321175-24321349 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 34-207 |
| Cow position: | chr27:27259600-27259768 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 34-207 |
| Cow position: | chr27:28276270-28276433 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 34-222 |
| Cow position: | chr27:14343477-14343294 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 35-207 |
| Cow position: | chr27:13841364-13841536 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 37-203 |
| Cow position: | chr27:28001818-28001662 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 104 |
| Conread position: | 37-207 |
| Cow position: | chr27:12596758-12596918 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 38-204 |
| Cow position: | chr27:12429398-12429565 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 38-207 |
| Cow position: | chr27:18434476-18434311 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 82, 47 |
| Conread position: | 38-207 |
| Cow position: | chr27:29250872-29251039 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 38-207 |
| Cow position: | chr27:30915001-30915161 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 39-207 |
| Cow position: | chr27:11536108-11535937 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 40-205 |
| Cow position: | chr27:7412381-7412540 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 40-206 |
| Cow position: | chr27:23554334-23554161 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 42-207 |
| Cow position: | chr27:22771749-22771917 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 43-171 |
| Cow position: | chr27:10395260-10395134 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 104 |
| Conread position: | 43-206 |
| Cow position: | chr27:26807564-26807405 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 43-207 |
| Cow position: | chr27:4386062-4385907 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 43-207 |
| Cow position: | chr27:8629874-8629712 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 44-207 |
| Cow position: | chr27:22498557-22498712 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 46-203 |
| Cow position: | chr27:6020313-6020158 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 46-207 |
| Cow position: | chr27:16619990-16620151 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-207 |
| Cow position: | chr27:2957408-2957567 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 119, 11 |
| Conread position: | 48-207 |
| Cow position: | chr27:22179788-22179638 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 72, 15 |
| Conread position: | 69-206 |
| Cow position: | chr27:24477438-24477575 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-207 |
| Cow position: | chr27:21453049-21452910 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.