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Cow genome map

           
Conread name:
           
rspc022_i7.y1
        

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:25092109-25091913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr29:3237358-3237562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr29:19949304-19949105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr29:24345454-24345640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr29:43328637-43328436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr29:19428652-19428459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
4-128
               

               
Cow position:
               
chr29:34358986-34359109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
4-135
               

               
Cow position:
               
chr29:27329885-27329756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
4-154
               

               
Cow position:
               
chr29:29314660-29314810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
4-157
               

               
Cow position:
               
chr29:12025475-12025629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
4-162
               

               
Cow position:
               
chr29:35292084-35291927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr29:31674625-31674465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
4-171
               

               
Cow position:
               
chr29:29942735-29942905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr29:41811595-41811756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr29:45005635-45005799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr29:40615529-40615704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr29:27588916-27588738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr29:4334718-4334539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr29:5186501-5186689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr29:36183273-36183083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 37
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr29:9718775-9718969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr29:10818442-10818634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr29:16609740-16609540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr29:22613422-22613227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 152
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr29:14484545-14484747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 162
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr29:17607410-17607215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr29:25474915-25474705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr29:3704206-3704406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr29:28446256-28446462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr29:43009092-43009287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr29:13639375-13639570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr29:16657686-16657482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
33, 191
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr29:23697969-23697775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr29:28195523-28195720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr29:31926297-31926493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr29:35458779-35458974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr29:41365103-41364906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:463662-463858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:2623487-2623684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:4480178-4480380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:4520332-4520131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:5892837-5892642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:11915819-11915612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 109
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:12680148-12679950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:14501585-14501386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:20178142-20178329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:22714730-22714932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:22778183-22778386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:24103547-24103753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:25737422-25737620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
42, 152
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:26615728-26615929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:28868631-28868428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:29769359-29769550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:31928981-31928774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:34744628-34744821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
111, 34
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:36217107-36216913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:39643168-39642972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:40096958-40096752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:40117564-40117364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:40891704-40891906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:41530842-41530645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:41747440-41747236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr29:2744275-2744477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 159
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr29:22162257-22162456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 152
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr29:36530859-36530658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr29:39111319-39111513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 152
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr29:456797-456966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr29:19762268-19762070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr29:11135903-11136092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr29:11684996-11684803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr29:23243887-23244064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:23983965-23984157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
6-205
               

               
Cow position:
               
chr29:42886381-42886178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr29:868765-868568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr29:2984881-2984680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr29:7407895-7408093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr29:1325432-1325233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
8-197
               

               
Cow position:
               
chr29:17668479-17668301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr29:2644312-2644512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 182
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr29:31489314-31489115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
11-186
               

               
Cow position:
               
chr29:17301514-17301341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr29:22068759-22068948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr29:32767533-32767726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr29:8190482-8190666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
13-206
               

               
Cow position:
               
chr29:19792287-19792484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
13-207
               

               
Cow position:
               
chr29:465410-465605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
14-207
               

               
Cow position:
               
chr29:19338971-19338775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
15-175
               

               
Cow position:
               
chr29:44682115-44682273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
15-200
               

               
Cow position:
               
chr29:3100268-3100459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
15-206
               

               
Cow position:
               
chr29:40166225-40166039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
15-207
               

               
Cow position:
               
chr29:13554118-13553928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
16-162
               

               
Cow position:
               
chr29:1124639-1124492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
16-206
               

               
Cow position:
               
chr29:14097143-14097335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr29:20903306-20903490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr29:5238704-5238514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr29:5241614-5241424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
18-145
               

               
Cow position:
               
chr29:29176636-29176759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
18-183
               

               
Cow position:
               
chr29:10235152-10235310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
18-204
               

               
Cow position:
               
chr29:14034347-14034528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
18-206
               

               
Cow position:
               
chr29:9912154-9911974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr29:3396086-3395906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr29:5109224-5109415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr29:9686021-9686205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr29:11696508-11696329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr29:26017526-26017718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr29:35281476-35281296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
19-203
               

               
Cow position:
               
chr29:26986908-26986738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
19-204
               

               
Cow position:
               
chr29:19660024-19659841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
20-200
               

               
Cow position:
               
chr29:377466-377644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
20-200
               

               
Cow position:
               
chr29:43496024-43495861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
176, 12
               

               
Conread position:
               
20-204
               

               
Cow position:
               
chr29:7865581-7865764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
20-206
               

               
Cow position:
               
chr29:4367702-4367517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
20-206
               

               
Cow position:
               
chr29:9195144-9195327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr29:11787776-11787589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
23, 184
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr29:32655453-32655630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
21-171
               

               
Cow position:
               
chr29:1395575-1395427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
21-206
               

               
Cow position:
               
chr29:356298-356123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
22-205
               

               
Cow position:
               
chr29:32963537-32963352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr29:17131-17309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr29:699639-699820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 125
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr29:4194137-4194325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 120
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr29:6337639-6337458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr29:30440910-30440721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
24-207
               

               
Cow position:
               
chr29:15738366-15738549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
24-207
               

               
Cow position:
               
chr29:21534698-21534884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 105
               

               
Conread position:
               
24-208
               

               
Cow position:
               
chr29:20673822-20674010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
25-207
               

               
Cow position:
               
chr29:4625023-4625197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
26-206
               

               
Cow position:
               
chr29:1022269-1022086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr29:11562586-11562409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
27-207
               

               
Cow position:
               
chr29:18735669-18735847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
27-225
               

               
Cow position:
               
chr29:19125316-19125120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
28-205
               

               
Cow position:
               
chr29:17109942-17109769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
31-197
               

               
Cow position:
               
chr29:94585-94743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
31-207
               

               
Cow position:
               
chr29:961892-961715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
31-207
               

               
Cow position:
               
chr29:21000612-21000437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
14, 167
               

               
Conread position:
               
32-169
               

               
Cow position:
               
chr29:34773768-34773904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
32-207
               

               
Cow position:
               
chr29:19253852-19254027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
33-205
               

               
Cow position:
               
chr29:36586544-36586376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
33-207
               

               
Cow position:
               
chr29:5919355-5919529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
33-207
               

               
Cow position:
               
chr29:42268661-42268487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr29:36037667-36037505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
34-205
               

               
Cow position:
               
chr29:26130748-26130581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
34-206
               

               
Cow position:
               
chr29:44232985-44233152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr29:6472280-6472111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr29:13615673-13615848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr29:29975008-29974837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr29:35434832-35434666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
35-207
               

               
Cow position:
               
chr29:2414850-2415021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 99
               

               
Conread position:
               
36-180
               

               
Cow position:
               
chr29:11071734-11071881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
37-205
               

               
Cow position:
               
chr29:4066048-4065884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
38-205
               

               
Cow position:
               
chr29:13372626-13372461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
38-205
               

               
Cow position:
               
chr29:19389448-19389284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
38-205
               

               
Cow position:
               
chr29:38581938-38581765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
38-206
               

               
Cow position:
               
chr29:28175248-28175080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-207
               

               
Cow position:
               
chr29:6844668-6844834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
38-207
               

               
Cow position:
               
chr29:9139374-9139204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
38-207
               

               
Cow position:
               
chr29:22175648-22175486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
38-207
               

               
Cow position:
               
chr29:38580938-38580771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
38-208
               

               
Cow position:
               
chr29:4805193-4805028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
38-214
               

               
Cow position:
               
chr29:12783995-12784165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
39-194
               

               
Cow position:
               
chr29:32211098-32211251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
39-207
               

               
Cow position:
               
chr29:17222373-17222204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
41-204
               

               
Cow position:
               
chr29:17409293-17409129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
42-207
               

               
Cow position:
               
chr29:13634344-13634505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
43-203
               

               
Cow position:
               
chr29:3711346-3711186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 77
               

               
Conread position:
               
43-207
               

               
Cow position:
               
chr29:2533015-2532857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
45-197
               

               
Cow position:
               
chr29:26508447-26508292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
54-207
               

               
Cow position:
               
chr29:4691733-4691886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
55-204
               

               
Cow position:
               
chr29:39329652-39329798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
56-207
               

               
Cow position:
               
chr29:1933611-1933761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
58-191
               

               
Cow position:
               
chr29:10659397-10659532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
63-206
               

               
Cow position:
               
chr29:5098824-5098965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               
Show alignments to all cow chromosomes.