Cow genome map

Conread name: rspc022_i7.y1

Conread position: 1-206
Cow position: chrX:7509167-7508964 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 44, 26

Conread position: 1-207
Cow position: chrX:45403801-45404010 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 1-207
Cow position: chrX:45429998-45430193 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 136, 25

Conread position: 2-135
Cow position: chrX:29230035-29229902 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 21

Conread position: 3-183
Cow position: chrX:20584350-20584166 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 24

Conread position: 3-202
Cow position: chrX:44397037-44396849 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 197, 29

Conread position: 3-207
Cow position: chrX:12249827-12249630 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 54

Conread position: 3-207
Cow position: chrX:33493801-33493598 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 31

Conread position: 4-118
Cow position: chrX:918704-918818 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 22

Conread position: 4-144
Cow position: chrX:26881544-26881685 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 4-153
Cow position: chrX:19003318-19003174 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 4-156
Cow position: chrX:5017390-5017543 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 16

Conread position: 4-156
Cow position: chrX:29121068-29120917 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 4-158
Cow position: chrX:45976947-45976789 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 4-159
Cow position: chrX:40685307-40685463 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 4-162
Cow position: chrX:15815111-15814952 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 79

Conread position: 4-162
Cow position: chrX:34565307-34565148 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 104

Conread position: 4-162
Cow position: chrX:37986252-37986098 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 83

Conread position: 4-162
Cow position: chrX:41871088-41870938 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 27

Conread position: 4-167
Cow position: chrX:27685269-27685107 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 40

Conread position: 4-170
Cow position: chrX:11614719-11614556 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 26

Conread position: 4-171
Cow position: chrX:34314052-34313889 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 41, 30

Conread position: 4-172
Cow position: chrX:13785339-13785508 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 143
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 0

Conread position: 4-175
Cow position: chrX:28845854-28845688 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 34

Conread position: 4-179
Cow position: chrX:5118481-5118654 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 4-194
Cow position: chrX:6414068-6413881 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 20

Conread position: 4-195
Cow position: chrX:5638148-5638330 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 4-196
Cow position: chrX:23513994-23514180 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 4-196
Cow position: chrX:32821050-32820863 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 116, 37

Conread position: 4-197
Cow position: chrX:4750282-4750470 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 4-197
Cow position: chrX:6407567-6407382 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 21

Conread position: 4-200
Cow position: chrX:12979813-12980000 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 60

Conread position: 4-200
Cow position: chrX:22921342-22921144 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 30

Conread position: 4-200
Cow position: chrX:27680419-27680232 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 79

Conread position: 4-201
Cow position: chrX:30133297-30133499 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 23

Conread position: 4-201
Cow position: chrX:40269512-40269314 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 4-203
Cow position: chrX:37750233-37750426 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 104

Conread position: 4-205
Cow position: chrX:20752275-20752085 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 108, 34

Conread position: 4-205
Cow position: chrX:38964129-38963932 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 23

Conread position: 4-205
Cow position: chrX:39558327-39558521 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 28

Conread position: 4-205
Cow position: chrX:47873315-47873516 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 21

Conread position: 4-206
Cow position: chrX:15007128-15007326 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 108, 34

Conread position: 4-206
Cow position: chrX:17541981-17541788 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 4-206
Cow position: chrX:17725996-17725799 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 41, 23

Conread position: 4-206
Cow position: chrX:18999909-18999713 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 21

Conread position: 4-206
Cow position: chrX:27516551-27516357 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 39

Conread position: 4-206
Cow position: chrX:29509418-29509619 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 12

Conread position: 4-207
Cow position: chrX:618981-619184 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-207
Cow position: chrX:2467905-2467703 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 21

Conread position: 4-207
Cow position: chrX:3654629-3654428 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 4-207
Cow position: chrX:4043842-4044027 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 4-207
Cow position: chrX:6234429-6234625 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 40

Conread position: 4-207
Cow position: chrX:6278477-6278682 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 22

Conread position: 4-207
Cow position: chrX:6544278-6544080 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 39, 30

Conread position: 4-207
Cow position: chrX:8797277-8797071 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 4-207
Cow position: chrX:8869381-8869585 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 43, 30

Conread position: 4-207
Cow position: chrX:8900048-8899848 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 117, 32

Conread position: 4-207
Cow position: chrX:11633703-11633502 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 41, 30

Conread position: 4-207
Cow position: chrX:11717762-11717959 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 36, 109

Conread position: 4-207
Cow position: chrX:11938914-11939103 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 4-207
Cow position: chrX:12018313-12018099 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 26

Conread position: 4-207
Cow position: chrX:12309365-12309565 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 106, 28

Conread position: 4-207
Cow position: chrX:14925022-14924823 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 33

Conread position: 4-207
Cow position: chrX:17231756-17231558 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 30

Conread position: 4-207
Cow position: chrX:17794994-17794809 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 4-207
Cow position: chrX:19015458-19015266 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 60

Conread position: 4-207
Cow position: chrX:20339870-20340067 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 4-207
Cow position: chrX:20583043-20582854 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 30

Conread position: 4-207
Cow position: chrX:23497646-23497841 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 4-207
Cow position: chrX:23563770-23563973 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 21

Conread position: 4-207
Cow position: chrX:23970400-23970212 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 74

Conread position: 4-207
Cow position: chrX:26875860-26876059 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 164, 0

Conread position: 4-207
Cow position: chrX:27175024-27174819 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 163

Conread position: 4-207
Cow position: chrX:29542196-29542395 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 30

Conread position: 4-207
Cow position: chrX:29601807-29602009 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 41, 30

Conread position: 4-207
Cow position: chrX:31312050-31311849 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 70, 0

Conread position: 4-207
Cow position: chrX:33000926-33000727 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 20

Conread position: 4-207
Cow position: chrX:35224317-35224123 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 15

Conread position: 4-207
Cow position: chrX:35542916-35542715 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 4-207
Cow position: chrX:36068036-36067843 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 21

Conread position: 4-207
Cow position: chrX:36961662-36961459 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 108, 22

Conread position: 4-207
Cow position: chrX:37781088-37781294 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 4-207
Cow position: chrX:38439502-38439298 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 4-207
Cow position: chrX:40567619-40567423 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 22

Conread position: 4-207
Cow position: chrX:41166941-41167141 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 41, 22

Conread position: 4-207
Cow position: chrX:41238333-41238542 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 109, 20

Conread position: 4-207
Cow position: chrX:42171273-42171476 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 4-207
Cow position: chrX:42235503-42235710 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 19

Conread position: 4-207
Cow position: chrX:42247161-42247360 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 113

Conread position: 4-207
Cow position: chrX:42994634-42994438 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 108, 34

Conread position: 4-207
Cow position: chrX:43779826-43780029 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 20

Conread position: 4-207
Cow position: chrX:45110676-45110479 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 4-207
Cow position: chrX:45502166-45501972 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 4-207
Cow position: chrX:45993247-45993042 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 126

Conread position: 4-207
Cow position: chrX:47484243-47484448 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 21

Conread position: 4-208
Cow position: chrX:31250409-31250212 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 30

Conread position: 4-208
Cow position: chrX:40648007-40647800 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 148, 34

Conread position: 4-219
Cow position: chrX:4279097-4279303 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 4-226
Cow position: chrX:31252438-31252222 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 0

Conread position: 5-118
Cow position: chrX:29050270-29050156 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 5-171
Cow position: chrX:5919512-5919352 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 29

Conread position: 5-171
Cow position: chrX:11085037-11085201 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 14

Conread position: 5-172
Cow position: chrX:35681362-35681195 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 34

Conread position: 5-179
Cow position: chrX:12405361-12405539 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 20

Conread position: 5-179
Cow position: chrX:39415344-39415518 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 14

Conread position: 5-189
Cow position: chrX:28098135-28097959 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 81

Conread position: 5-192
Cow position: chrX:28157520-28157333 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 34

Conread position: 5-205
Cow position: chrX:46587842-46587643 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 21

Conread position: 5-206
Cow position: chrX:34411866-34411665 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 123

Conread position: 5-207
Cow position: chrX:5872337-5872137 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 104, 21

Conread position: 5-207
Cow position: chrX:8925719-8925529 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 5-207
Cow position: chrX:11589568-11589765 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 110, 22

Conread position: 5-207
Cow position: chrX:22074815-22074624 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 5-207
Cow position: chrX:44656936-44657141 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 145

Conread position: 5-208
Cow position: chrX:42461724-42461923 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 6-166
Cow position: chrX:616240-616401 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 136
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 19

Conread position: 6-168
Cow position: chrX:9365657-9365815 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 6-207
Cow position: chrX:11856449-11856252 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 25

Conread position: 6-207
Cow position: chrX:21593306-21593107 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 106, 21

Conread position: 6-207
Cow position: chrX:31436493-31436306 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 6-207
Cow position: chrX:34441429-34441628 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 21

Conread position: 6-207
Cow position: chrX:40809704-40809510 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 106, 13

Conread position: 6-207
Cow position: chrX:45846121-45845919 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 6-208
Cow position: chrX:16416529-16416329 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 106, 84

Conread position: 7-206
Cow position: chrX:25568377-25568575 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 41

Conread position: 7-207
Cow position: chrX:7722010-7721808 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 7-207
Cow position: chrX:31340729-31340528 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 8

Conread position: 7-207
Cow position: chrX:40035423-40035621 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 168, 98

Conread position: 7-207
Cow position: chrX:40789230-40789028 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 8-172
Cow position: chrX:40557662-40557826 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 8-180
Cow position: chrX:1946695-1946865 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 43

Conread position: 8-180
Cow position: chrX:21986273-21986446 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 18

Conread position: 8-204
Cow position: chrX:29289595-29289403 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 18

Conread position: 8-205
Cow position: chrX:41884395-41884592 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 25

Conread position: 8-207
Cow position: chrX:1514395-1514577 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 18

Conread position: 8-207
Cow position: chrX:11656112-11655912 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 8-207
Cow position: chrX:18216305-18216100 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 26

Conread position: 8-207
Cow position: chrX:24132128-24132328 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 121

Conread position: 8-207
Cow position: chrX:41743931-41743736 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 17

Conread position: 8-208
Cow position: chrX:20791801-20791995 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 19

Conread position: 8-208
Cow position: chrX:39938506-39938700 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 8-265
Cow position: chrX:16289541-16289790 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 107, 28

Conread position: 9-207
Cow position: chrX:33639994-33639795 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 82

Conread position: 10-207
Cow position: chrX:678551-678744 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 14, 57

Conread position: 11-207
Cow position: chrX:25338202-25338003 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 24

Conread position: 12-207
Cow position: chrX:917348-917548 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 95

Conread position: 12-207
Cow position: chrX:20710088-20709895 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 31, 22

Conread position: 13-201
Cow position: chrX:27228144-27227954 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 156

Conread position: 13-207
Cow position: chrX:21642464-21642656 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 85

Conread position: 13-207
Cow position: chrX:34532532-34532352 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 13-207
Cow position: chrX:37232425-37232233 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 14-207
Cow position: chrX:1055383-1055566 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 12

Conread position: 14-207
Cow position: chrX:27431901-27432095 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 159, 0

Conread position: 15-203
Cow position: chrX:30922199-30922009 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 160

Conread position: 15-207
Cow position: chrX:1616035-1616224 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 15-207
Cow position: chrX:14883946-14884138 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 19

Conread position: 15-207
Cow position: chrX:28846865-28847055 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 9, 136

Conread position: 16-205
Cow position: chrX:34192682-34192502 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 16-206
Cow position: chrX:1505720-1505537 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 11

Conread position: 16-206
Cow position: chrX:7571914-7571731 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 16-207
Cow position: chrX:33855222-33855409 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 17-207
Cow position: chrX:30543279-30543467 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 14, 21

Conread position: 18-183
Cow position: chrX:28105925-28105768 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 18-205
Cow position: chrX:842168-841984 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 7

Conread position: 18-205
Cow position: chrX:35284632-35284449 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 145

Conread position: 18-207
Cow position: chrX:13265615-13265796 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 54

Conread position: 18-207
Cow position: chrX:31256874-31256691 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 18-207
Cow position: chrX:48010611-48010418 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 7

Conread position: 19-206
Cow position: chrX:45875004-45874823 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 101, 18

Conread position: 19-207
Cow position: chrX:28835896-28836078 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 8

Conread position: 20-206
Cow position: chrX:23024712-23024528 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 7

Conread position: 20-207
Cow position: chrX:17630798-17630979 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 15

Conread position: 20-207
Cow position: chrX:46072814-46072997 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 21-182
Cow position: chrX:8913929-8913768 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 119

Conread position: 21-182
Cow position: chrX:8915673-8915512 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 119

Conread position: 21-206
Cow position: chrX:22866570-22866756 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 21-207
Cow position: chrX:19930658-19930479 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 11

Conread position: 21-207
Cow position: chrX:36061165-36060975 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 21-208
Cow position: chrX:27509016-27509197 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 83

Conread position: 22-207
Cow position: chrX:25232599-25232414 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 136

Conread position: 22-208
Cow position: chrX:488498-488312 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 151

Conread position: 23-207
Cow position: chrX:2186259-2186082 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 75

Conread position: 23-207
Cow position: chrX:27442548-27442732 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 111

Conread position: 23-207
Cow position: chrX:29680255-29680433 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 139

Conread position: 23-207
Cow position: chrX:37048574-37048756 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 16

Conread position: 23-207
Cow position: chrX:40480863-40481049 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 8

Conread position: 24-168
Cow position: chrX:21566410-21566261 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 24-204
Cow position: chrX:1503342-1503165 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 53

Conread position: 24-204
Cow position: chrX:13647781-13647957 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 42

Conread position: 24-207
Cow position: chrX:9201556-9201370 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 24-207
Cow position: chrX:16514258-16514441 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 66

Conread position: 24-207
Cow position: chrX:38549448-38549272 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 24-207
Cow position: chrX:45414297-45414476 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 24-207
Cow position: chrX:46722731-46722917 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 24-214
Cow position: chrX:24259578-24259764 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 72

Conread position: 25-207
Cow position: chrX:37574847-37574680 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 60

Conread position: 25-207
Cow position: chrX:42492513-42492691 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 52

Conread position: 26-186
Cow position: chrX:35969084-35969238 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 121

Conread position: 26-205
Cow position: chrX:7497241-7497069 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 8

Conread position: 26-205
Cow position: chrX:44054808-44054627 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 83, 141

Conread position: 26-206
Cow position: chrX:48236819-48236636 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 17

Conread position: 26-207
Cow position: chrX:10959392-10959577 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 181

Conread position: 26-207
Cow position: chrX:15139541-15139721 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 146

Conread position: 26-207
Cow position: chrX:30962872-30963048 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 129

Conread position: 26-207
Cow position: chrX:33466610-33466437 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 26-207
Cow position: chrX:41674110-41673927 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 84, 12

Conread position: 26-207
Cow position: chrX:42381102-42381276 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 17

Conread position: 26-207
Cow position: chrX:48035427-48035251 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 26-208
Cow position: chrX:40116423-40116244 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 144

Conread position: 26-221
Cow position: chrX:22387240-22387439 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 27-197
Cow position: chrX:10129008-10128838 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 22

Conread position: 27-206
Cow position: chrX:43527513-43527328 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 144

Conread position: 27-207
Cow position: chrX:8731086-8730903 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 86, 16

Conread position: 27-207
Cow position: chrX:10411983-10412165 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 13, 64

Conread position: 27-207
Cow position: chrX:43730219-43730391 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 43

Conread position: 27-208
Cow position: chrX:45598600-45598781 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 100

Conread position: 29-208
Cow position: chrX:21665594-21665771 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 134

Conread position: 30-207
Cow position: chrX:19188936-19188760 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 109

Conread position: 30-207
Cow position: chrX:24424391-24424564 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 31-197
Cow position: chrX:14003643-14003811 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 31-207
Cow position: chrX:18694929-18695096 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 24

Conread position: 31-207
Cow position: chrX:38006768-38006944 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 166, 172

Conread position: 32-207
Cow position: chrX:32020124-32020298 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 132

Conread position: 33-196
Cow position: chrX:48385362-48385529 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 33-207
Cow position: chrX:42086852-42086685 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 54

Conread position: 34-173
Cow position: chrX:34454658-34454518 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 46

Conread position: 34-207
Cow position: chrX:21663298-21663132 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 51

Conread position: 34-207
Cow position: chrX:27514862-27514692 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 27

Conread position: 34-207
Cow position: chrX:28134340-28134169 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 80

Conread position: 34-207
Cow position: chrX:40183350-40183526 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 34-208
Cow position: chrX:15485631-15485804 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 130

Conread position: 35-204
Cow position: chrX:9770684-9770858 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 35-206
Cow position: chrX:35387909-35388081 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 144
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 35-207
Cow position: chrX:48287456-48287629 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 113

Conread position: 36-150
Cow position: chrX:20790913-20790798 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 36-195
Cow position: chrX:23254214-23254378 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 37-164
Cow position: chrX:41027146-41027020 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 37-208
Cow position: chrX:14599523-14599352 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 38-182
Cow position: chrX:4091637-4091492 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 118

Conread position: 38-203
Cow position: chrX:27771974-27772133 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 38-204
Cow position: chrX:26440789-26440953 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 109

Conread position: 38-204
Cow position: chrX:35885740-35885903 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 13

Conread position: 38-206
Cow position: chrX:46032731-46032897 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 100

Conread position: 38-207
Cow position: chrX:21004670-21004505 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 38-207
Cow position: chrX:32420207-32420042 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 72, 16

Conread position: 38-207
Cow position: chrX:34401987-34401821 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 140
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 150, 135

Conread position: 38-207
Cow position: chrX:38094531-38094702 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 161

Conread position: 38-207
Cow position: chrX:41790456-41790621 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 39-207
Cow position: chrX:41403967-41403796 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 39-207
Cow position: chrX:41410515-41410344 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 40-200
Cow position: chrX:46315390-46315551 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 156, 0

Conread position: 40-207
Cow position: chrX:47046519-47046696 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 42-207
Cow position: chrX:17662608-17662773 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 42-207
Cow position: chrX:45759377-45759221 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 43-199
Cow position: chrX:35273339-35273184 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 43-200
Cow position: chrX:34792324-34792480 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 132
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 100, 0

Conread position: 43-205
Cow position: chrX:48684240-48684397 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 119

Conread position: 43-207
Cow position: chrX:20151834-20151674 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 120

Conread position: 43-207
Cow position: chrX:26625692-26625853 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 94, 42

Conread position: 43-207
Cow position: chrX:27446680-27446512 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 109

Conread position: 43-207
Cow position: chrX:36283336-36283169 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 43-208
Cow position: chrX:34238699-34238543 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 42

Conread position: 45-175
Cow position: chrX:10366244-10366374 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 47-171
Cow position: chrX:29723722-29723597 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 47-205
Cow position: chrX:43049329-43049170 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 47-206
Cow position: chrX:25411821-25411661 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 63, 83

Conread position: 47-207
Cow position: chrX:19019126-19019287 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 91

Conread position: 47-207
Cow position: chrX:38967628-38967474 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 89

Conread position: 47-208
Cow position: chrX:15147207-15147364 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 112

Conread position: 48-207
Cow position: chrX:10831514-10831673 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 50-207
Cow position: chrX:16541694-16541854 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 51-207
Cow position: chrX:9635209-9635357 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 51-207
Cow position: chrX:9997359-9997510 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 53-158
Cow position: chrX:19273748-19273854 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 53-206
Cow position: chrX:24149615-24149464 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 54-207
Cow position: chrX:46429887-46430034 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 55-207
Cow position: chrX:23785635-23785477 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 57-199
Cow position: chrX:27145593-27145455 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 102, 0

Conread position: 70-207
Cow position: chrX:9954103-9953965 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 77-195
Cow position: chrX:37072358-37072241 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 0

Show alignments to all cow chromosomes.