Cow genome map

Conread name: rspc027_k15.y1

Conread position: 1-197
Cow position: chr25:9056316-9056124 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 79

Conread position: 17-208
Cow position: chr25:23244887-23245071 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 21-218
Cow position: chr25:26087632-26087442 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 35

Conread position: 24-149
Cow position: chr25:36872948-36873069 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 24-156
Cow position: chr25:15218240-15218116 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 24-160
Cow position: chr25:6258995-6258859 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 70

Conread position: 24-160
Cow position: chr25:15254240-15254372 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 24-163
Cow position: chr25:26161077-26160938 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 24-173
Cow position: chr25:35109161-35109306 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 24-174
Cow position: chr25:36840504-36840358 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 104, 53

Conread position: 24-189
Cow position: chr25:17704852-17704694 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 24-196
Cow position: chr25:16867349-16867183 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 70

Conread position: 24-210
Cow position: chr25:10643201-10643380 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 24-210
Cow position: chr25:16921688-16921866 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 9, 67

Conread position: 24-211
Cow position: chr25:33555713-33555536 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 24-213
Cow position: chr25:25716753-25716577 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 24-214
Cow position: chr25:7380731-7380927 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 130, 62

Conread position: 24-214
Cow position: chr25:14513223-14513036 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 100, 66

Conread position: 24-214
Cow position: chr25:23505160-23504972 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 146, 62

Conread position: 24-218
Cow position: chr25:432940-433128 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 24-218
Cow position: chr25:13272677-13272488 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 24-218
Cow position: chr25:22242071-22241896 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 24-219
Cow position: chr25:22750899-22751089 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 182, 66

Conread position: 24-220
Cow position: chr25:6928400-6928589 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 24-220
Cow position: chr25:7216932-7216749 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 24-220
Cow position: chr25:7641342-7641535 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 147, 46

Conread position: 24-220
Cow position: chr25:8157403-8157591 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 182, 28

Conread position: 24-220
Cow position: chr25:9843284-9843095 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 24-220
Cow position: chr25:11585626-11585436 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 24-220
Cow position: chr25:13443302-13443494 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 157, 67

Conread position: 24-220
Cow position: chr25:14791862-14791673 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 155, 66

Conread position: 24-220
Cow position: chr25:17474405-17474594 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 24-220
Cow position: chr25:18564594-18564409 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 32

Conread position: 24-220
Cow position: chr25:19363951-19364141 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 24-220
Cow position: chr25:21191597-21191406 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 24-220
Cow position: chr25:22730936-22730748 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 84, 50

Conread position: 24-220
Cow position: chr25:23817732-23817929 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 168, 61

Conread position: 24-220
Cow position: chr25:23917949-23917763 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 149, 68

Conread position: 24-220
Cow position: chr25:26052010-26051820 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 85, 8

Conread position: 24-220
Cow position: chr25:26655015-26654829 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 112, 66

Conread position: 24-220
Cow position: chr25:33457840-33457649 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 147, 62

Conread position: 24-220
Cow position: chr25:36081983-36081796 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 24-220
Cow position: chr25:36535312-36535517 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 24-220
Cow position: chr25:38982201-38982022 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 24-221
Cow position: chr25:7581319-7581506 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 46

Conread position: 24-221
Cow position: chr25:10504233-10504419 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 24-221
Cow position: chr25:28187837-28188028 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 61, 0

Conread position: 24-222
Cow position: chr25:8961878-8961685 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 151, 62

Conread position: 24-222
Cow position: chr25:12807146-12806961 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 24-222
Cow position: chr25:13672511-13672311 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 44

Conread position: 24-222
Cow position: chr25:14196969-14196777 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 115, 36

Conread position: 24-222
Cow position: chr25:20008241-20008052 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 93, 66

Conread position: 24-222
Cow position: chr25:20069828-20069641 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 74

Conread position: 24-222
Cow position: chr25:26224921-26225108 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 24-222
Cow position: chr25:26701134-26700948 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 24-222
Cow position: chr25:30619171-30618981 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 24-222
Cow position: chr25:36120606-36120419 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 122, 66

Conread position: 24-222
Cow position: chr25:36762213-36762024 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 133, 63

Conread position: 25-218
Cow position: chr25:5920187-5920005 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 25-222
Cow position: chr25:12840611-12840805 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 65

Conread position: 26-214
Cow position: chr25:34788148-34788338 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 33

Conread position: 26-220
Cow position: chr25:9269449-9269269 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 26-220
Cow position: chr25:15714979-15714792 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 26-220
Cow position: chr25:18266270-18266079 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 64

Conread position: 26-220
Cow position: chr25:21893444-21893255 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 26-222
Cow position: chr25:12997711-12997511 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 91

Conread position: 26-222
Cow position: chr25:18905991-18905803 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 27-222
Cow position: chr25:20076602-20076410 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 146, 60

Conread position: 29-163
Cow position: chr25:4221500-4221630 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 29-163
Cow position: chr25:9990007-9990137 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 29-210
Cow position: chr25:19478778-19478602 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 179, 58

Conread position: 29-213
Cow position: chr25:26089710-26089890 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 148, 62

Conread position: 29-214
Cow position: chr25:14720847-14720671 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 29-220
Cow position: chr25:6682959-6683145 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 29-220
Cow position: chr25:7799650-7799472 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 29-222
Cow position: chr25:12252706-12252895 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 137, 61

Conread position: 32-214
Cow position: chr25:6688045-6687872 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 32-218
Cow position: chr25:36036679-36036859 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 32-220
Cow position: chr25:11436707-11436891 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 167, 58

Conread position: 33-197
Cow position: chr25:18541847-18542007 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 33-197
Cow position: chr25:36019570-36019726 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 33-220
Cow position: chr25:13569078-13569251 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 33-220
Cow position: chr25:27801378-27801206 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 8, 58

Conread position: 33-222
Cow position: chr25:21245505-21245686 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 34-189
Cow position: chr25:447167-447318 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 34-214
Cow position: chr25:40321190-40321372 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 124, 56

Conread position: 41-220
Cow position: chr25:9349193-9349361 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 41-220
Cow position: chr25:15377417-15377245 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 47-221
Cow position: chr25:22296941-22297100 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 52-220
Cow position: chr25:19317345-19317180 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 127, 38

Conread position: 58-220
Cow position: chr25:9956961-9957120 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 61-220
Cow position: chr25:37594477-37594323 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 61-222
Cow position: chr25:12755408-12755573 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 21

Conread position: 63-222
Cow position: chr25:12081253-12081403 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 96-220
Cow position: chr25:30450085-30449961 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 79, 72

Conread position: 104-219
Cow position: chr25:11679176-11679064 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 105-222
Cow position: chr25:25827502-25827386 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 111-222
Cow position: chr25:26269912-26270022 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.