Cow genome map
| Conread name: | rspc027_k15.y1 |
| Conread position: | 1-164 |
| Cow position: | chr6:43651932-43651766 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 1-168 |
| Cow position: | chr6:11137408-11137241 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 1-213 |
| Cow position: | chr6:38218845-38218637 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 1-220 |
| Cow position: | chr6:4864370-4864587 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 1-221 |
| Cow position: | chr6:44623791-44623567 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 5-220 |
| Cow position: | chr6:58074218-58074009 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 12-218 |
| Cow position: | chr6:14958178-14958382 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 18-197 |
| Cow position: | chr6:13053953-13053778 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 38 |
| Conread position: | 23-214 |
| Cow position: | chr6:37463173-37462985 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 148, 68 |
| Conread position: | 23-217 |
| Cow position: | chr6:38771431-38771250 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 23-220 |
| Cow position: | chr6:32268737-32268915 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 23-220 |
| Cow position: | chr6:36470411-36470605 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 151, 68 |
| Conread position: | 23-220 |
| Cow position: | chr6:54490586-54490774 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 24-149 |
| Cow position: | chr6:40878931-40878806 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-156 |
| Cow position: | chr6:21066733-21066862 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 98, 62 |
| Conread position: | 24-163 |
| Cow position: | chr6:61168905-61168770 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 24-166 |
| Cow position: | chr6:54127666-54127801 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 24-174 |
| Cow position: | chr6:7568274-7568127 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 114, 62 |
| Conread position: | 24-180 |
| Cow position: | chr6:1475495-1475345 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 24-189 |
| Cow position: | chr6:67805865-67806027 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 154, 62 |
| Conread position: | 24-191 |
| Cow position: | chr6:21535189-21535028 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 58 |
| Conread position: | 24-199 |
| Cow position: | chr6:59301638-59301806 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 142, 63 |
| Conread position: | 24-202 |
| Cow position: | chr6:58597355-58597530 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 24-204 |
| Cow position: | chr6:21004826-21004649 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 24-207 |
| Cow position: | chr6:61681227-61681047 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 141, 67 |
| Conread position: | 24-209 |
| Cow position: | chr6:47355971-47355790 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 151, 8 |
| Conread position: | 24-210 |
| Cow position: | chr6:6343580-6343401 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 24-212 |
| Cow position: | chr6:17794614-17794792 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 24-213 |
| Cow position: | chr6:35990084-35990267 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 57 |
| Conread position: | 24-214 |
| Cow position: | chr6:48803489-48803669 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 24-214 |
| Cow position: | chr6:63298881-63299065 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 24-214 |
| Cow position: | chr6:67214899-67214712 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 148, 65 |
| Conread position: | 24-215 |
| Cow position: | chr6:8094128-8094325 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 137 |
| Conread position: | 24-215 |
| Cow position: | chr6:19131580-19131395 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 24-217 |
| Cow position: | chr6:41655892-41656079 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 24-218 |
| Cow position: | chr6:2585092-2584904 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 24-218 |
| Cow position: | chr6:3592547-3592362 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 32, 36 |
| Conread position: | 24-218 |
| Cow position: | chr6:19446400-19446216 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 24-218 |
| Cow position: | chr6:37783550-37783364 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 179, 58 |
| Conread position: | 24-218 |
| Cow position: | chr6:47339206-47339394 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 156, 67 |
| Conread position: | 24-218 |
| Cow position: | chr6:47958961-47958775 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 24-219 |
| Cow position: | chr6:54990851-54991041 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 127, 57 |
| Conread position: | 24-219 |
| Cow position: | chr6:67456868-67456684 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 24-220 |
| Cow position: | chr6:4691826-4692018 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 145, 32 |
| Conread position: | 24-220 |
| Cow position: | chr6:5330561-5330371 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:6673257-6673065 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 24-220 |
| Cow position: | chr6:7801247-7801433 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:8787887-8788076 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:10105829-10106022 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 149, 62 |
| Conread position: | 24-220 |
| Cow position: | chr6:10176152-10176335 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:11169852-11169659 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 24-220 |
| Cow position: | chr6:11246916-11246724 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:14914086-14914280 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 141, 66 |
| Conread position: | 24-220 |
| Cow position: | chr6:15447048-15447242 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 141, 66 |
| Conread position: | 24-220 |
| Cow position: | chr6:16707162-16706972 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 136, 63 |
| Conread position: | 24-220 |
| Cow position: | chr6:17068498-17068688 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:19013213-19013028 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 151, 56 |
| Conread position: | 24-220 |
| Cow position: | chr6:23401843-23402029 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:24781411-24781595 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 187, 5 |
| Conread position: | 24-220 |
| Cow position: | chr6:25614941-25615143 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 128, 133 |
| Conread position: | 24-220 |
| Cow position: | chr6:28148405-28148213 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 24-220 |
| Cow position: | chr6:28976890-28977083 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 149, 63 |
| Conread position: | 24-220 |
| Cow position: | chr6:31564188-31564378 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 151, 70 |
| Conread position: | 24-220 |
| Cow position: | chr6:35103178-35103372 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 107, 66 |
| Conread position: | 24-220 |
| Cow position: | chr6:37395250-37395447 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 24-220 |
| Cow position: | chr6:38441322-38441137 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:38640383-38640192 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:44078664-44078478 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:46558207-46558015 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 24-220 |
| Cow position: | chr6:52478261-52478453 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 158, 66 |
| Conread position: | 24-220 |
| Cow position: | chr6:52901388-52901195 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 67 |
| Conread position: | 24-220 |
| Cow position: | chr6:53841356-53841542 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:54365182-54365369 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:56986501-56986684 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 24-220 |
| Cow position: | chr6:60667560-60667381 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 24-220 |
| Cow position: | chr6:63047742-63047540 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 139, 55 |
| Conread position: | 24-220 |
| Cow position: | chr6:64432088-64431896 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 66 |
| Conread position: | 24-220 |
| Cow position: | chr6:67951099-67950913 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 24-221 |
| Cow position: | chr6:2623923-2623742 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 24-221 |
| Cow position: | chr6:22525479-22525292 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 24-221 |
| Cow position: | chr6:40713359-40713540 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:582123-582313 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:8966247-8966050 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 67 |
| Conread position: | 24-222 |
| Cow position: | chr6:15242986-15242791 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 103, 58 |
| Conread position: | 24-222 |
| Cow position: | chr6:16352204-16352388 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:17997170-17997355 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:18144347-18144152 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 24-222 |
| Cow position: | chr6:19681375-19681569 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:20196153-20196335 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:21061737-21061928 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 149, 9 |
| Conread position: | 24-222 |
| Cow position: | chr6:21235193-21235003 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 24-222 |
| Cow position: | chr6:33509936-33509749 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 24-222 |
| Cow position: | chr6:34195999-34196191 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 61 |
| Conread position: | 24-222 |
| Cow position: | chr6:36284390-36284201 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 130, 27 |
| Conread position: | 24-222 |
| Cow position: | chr6:37199388-37199571 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:40774182-40774386 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 141, 56 |
| Conread position: | 24-222 |
| Cow position: | chr6:42565837-42565648 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:45064867-45065057 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:53519474-53519664 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 168, 67 |
| Conread position: | 24-222 |
| Cow position: | chr6:53932698-53932888 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 24-222 |
| Cow position: | chr6:54867667-54867473 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 154, 66 |
| Conread position: | 24-222 |
| Cow position: | chr6:55417378-55417568 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 24-222 |
| Cow position: | chr6:55535602-55535790 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:57571629-57571437 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 24-222 |
| Cow position: | chr6:60516975-60516784 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 179, 62 |
| Conread position: | 24-222 |
| Cow position: | chr6:60740164-60739975 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 25-214 |
| Cow position: | chr6:6060423-6060600 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 25-220 |
| Cow position: | chr6:12338148-12337950 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 25-222 |
| Cow position: | chr6:67282043-67281856 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 26-188 |
| Cow position: | chr6:14063154-14063317 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 141 |
| Conread position: | 26-213 |
| Cow position: | chr6:59069472-59069658 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 69 |
| Conread position: | 26-218 |
| Cow position: | chr6:33929399-33929587 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 140, 64 |
| Conread position: | 26-220 |
| Cow position: | chr6:16191819-16191635 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 142, 56 |
| Conread position: | 26-220 |
| Cow position: | chr6:27815322-27815517 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 109, 86 |
| Conread position: | 26-220 |
| Cow position: | chr6:35436142-35435953 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 26-220 |
| Cow position: | chr6:36454448-36454630 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 26-220 |
| Cow position: | chr6:36652569-36652380 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 166, 21 |
| Conread position: | 26-220 |
| Cow position: | chr6:65264398-65264577 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 26-220 |
| Cow position: | chr6:67451223-67451411 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 27-206 |
| Cow position: | chr6:47305486-47305313 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 27-222 |
| Cow position: | chr6:2153452-2153639 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 29-205 |
| Cow position: | chr6:47884885-47885046 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 29-212 |
| Cow position: | chr6:59603063-59603242 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 29-214 |
| Cow position: | chr6:7119474-7119653 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 29-214 |
| Cow position: | chr6:32853332-32853153 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 29-220 |
| Cow position: | chr6:5609302-5609485 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 29-220 |
| Cow position: | chr6:23532799-23532618 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 47 |
| Conread position: | 29-220 |
| Cow position: | chr6:38641637-38641455 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 145, 62 |
| Conread position: | 30-220 |
| Cow position: | chr6:45596391-45596575 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 169, 9 |
| Conread position: | 32-212 |
| Cow position: | chr6:48112338-48112167 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 32-220 |
| Cow position: | chr6:35613275-35613463 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 32-220 |
| Cow position: | chr6:59718938-59718757 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 32-220 |
| Cow position: | chr6:66874491-66874311 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 32-222 |
| Cow position: | chr6:17548833-17549022 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 134, 8 |
| Conread position: | 32-222 |
| Cow position: | chr6:20097817-20098005 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 130, 59 |
| Conread position: | 33-214 |
| Cow position: | chr6:36202959-36202787 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 33-220 |
| Cow position: | chr6:5113912-5114084 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 33-220 |
| Cow position: | chr6:7189978-7190158 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 33-220 |
| Cow position: | chr6:17090739-17090560 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 149, 11 |
| Conread position: | 33-220 |
| Cow position: | chr6:26450453-26450278 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 33-220 |
| Cow position: | chr6:47640291-47640472 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 158, 59 |
| Conread position: | 33-222 |
| Cow position: | chr6:12091853-12092034 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 33-222 |
| Cow position: | chr6:17527448-17527629 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 33-222 |
| Cow position: | chr6:18048886-18049065 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 33-222 |
| Cow position: | chr6:19292942-19292758 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 133, 57 |
| Conread position: | 33-222 |
| Cow position: | chr6:61142421-61142605 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 98, 57 |
| Conread position: | 34-208 |
| Cow position: | chr6:65845991-65846153 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 34-222 |
| Cow position: | chr6:68652211-68652394 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 35-220 |
| Cow position: | chr6:38614951-38614777 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 35-221 |
| Cow position: | chr6:12845514-12845345 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 159, 41 |
| Conread position: | 35-222 |
| Cow position: | chr6:51399213-51399043 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 40-217 |
| Cow position: | chr6:60057521-60057690 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 47-220 |
| Cow position: | chr6:31635557-31635731 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 52-217 |
| Cow position: | chr6:5845049-5845208 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 59-218 |
| Cow position: | chr6:30974157-30974010 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 59-220 |
| Cow position: | chr6:12542815-12542972 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 65-220 |
| Cow position: | chr6:16700370-16700226 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 65-222 |
| Cow position: | chr6:23353659-23353512 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 69-220 |
| Cow position: | chr6:20157438-20157292 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 72-222 |
| Cow position: | chr6:48170040-48169905 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 91-220 |
| Cow position: | chr6:54364905-54365042 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 93-220 |
| Cow position: | chr6:44099171-44099048 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 95-220 |
| Cow position: | chr6:57405042-57405162 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 102-221 |
| Cow position: | chr6:46998063-46998178 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 106-222 |
| Cow position: | chr6:5413894-5413782 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 110-221 |
| Cow position: | chr6:30688547-30688655 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 111-220 |
| Cow position: | chr6:34076096-34075988 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 53 |
Show alignments to all cow chromosomes.